Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4Z6Q
DownloadVisualize
BU of 4z6q by Molmil
Structure of H200N variant of Homoprotocatechuate 2,3-Dioxygenase from B.fuscum in complex with HPCA at 1.57 Ang resolution
Descriptor: 2-(3,4-DIHYDROXYPHENYL)ACETIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Kovaleva, E.G, Lipscomb, J.D.
Deposit date:2015-04-06
Release date:2015-08-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Structural Basis for Substrate and Oxygen Activation in Homoprotocatechuate 2,3-Dioxygenase: Roles of Conserved Active Site Histidine 200.
Biochemistry, 54, 2015
4Z6V
DownloadVisualize
BU of 4z6v by Molmil
Structure of H200Q variant of Homoprotocatechuate 2,3-Dioxygenase from B.fuscum in complex with 4-nitrocatechol at 1.37 Ang resolution
Descriptor: 4-NITROCATECHOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Kovaleva, E.G, Lipscomb, J.D.
Deposit date:2015-04-06
Release date:2015-08-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Structural Basis for Substrate and Oxygen Activation in Homoprotocatechuate 2,3-Dioxygenase: Roles of Conserved Active Site Histidine 200.
Biochemistry, 54, 2015
4Z6M
DownloadVisualize
BU of 4z6m by Molmil
Structure of H200Q variant of Homoprotocatechuate 2,3-Dioxygenase from B.fuscum at 1.35 Ang resolution
Descriptor: CALCIUM ION, CHLORIDE ION, FE (II) ION, ...
Authors:Kovaleva, E.G, Lipscomb, J.D.
Deposit date:2015-04-06
Release date:2015-08-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural Basis for Substrate and Oxygen Activation in Homoprotocatechuate 2,3-Dioxygenase: Roles of Conserved Active Site Histidine 200.
Biochemistry, 54, 2015
4Z6S
DownloadVisualize
BU of 4z6s by Molmil
Structure of H200Q variant of Homoprotocatechuate 2,3-Dioxygenase from B.fuscum in complex with 4-sulfonyl catechol at 1.42 Ang resolution
Descriptor: 3,4-dihydroxybenzenesulfonic acid, CALCIUM ION, CHLORIDE ION, ...
Authors:Kovaleva, E.G, Lipscomb, J.D.
Deposit date:2015-04-06
Release date:2015-08-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structural Basis for Substrate and Oxygen Activation in Homoprotocatechuate 2,3-Dioxygenase: Roles of Conserved Active Site Histidine 200.
Biochemistry, 54, 2015
4Z6U
DownloadVisualize
BU of 4z6u by Molmil
Structure of H200E variant of Homoprotocatechuate 2,3-Dioxygenase from B.fuscum in complex with 4-nitrocatechol at 1.48 Ang resolution
Descriptor: 4-NITROCATECHOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Kovaleva, E.G, Lipscomb, J.D.
Deposit date:2015-04-06
Release date:2015-08-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Structural Basis for Substrate and Oxygen Activation in Homoprotocatechuate 2,3-Dioxygenase: Roles of Conserved Active Site Histidine 200.
Biochemistry, 54, 2015
4Z6O
DownloadVisualize
BU of 4z6o by Molmil
Structure of H200E variant of Homoprotocatechuate 2,3-Dioxygenase from B.fuscum in complex with HPCA at 1.63 Ang resolution
Descriptor: 2-(3,4-DIHYDROXYPHENYL)ACETIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Kovaleva, E.G, Lipscomb, J.D.
Deposit date:2015-04-06
Release date:2015-08-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Structural Basis for Substrate and Oxygen Activation in Homoprotocatechuate 2,3-Dioxygenase: Roles of Conserved Active Site Histidine 200.
Biochemistry, 54, 2015
1Q0C
DownloadVisualize
BU of 1q0c by Molmil
Anerobic Substrate Complex of Homoprotocatechuate 2,3-Dioxygenase from Brevibacterium fuscum. (Complex with 3,4-Dihydroxyphenylacetate)
Descriptor: 2-(3,4-DIHYDROXYPHENYL)ACETIC ACID, FE (III) ION, homoprotocatechuate 2,3-dioxygenase
Authors:Vetting, M.W, Wackett, L.P, Que, L, Lipscomb, J.D, Ohlendorf, D.H.
Deposit date:2003-07-15
Release date:2003-07-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystallographic comparison of manganese- and iron-dependent homoprotocatechuate 2,3-dioxygenases.
J.Bacteriol., 186, 2004
1Q0O
DownloadVisualize
BU of 1q0o by Molmil
CRYSTAL STRUCTURE OF HOMOPROTOCATECHUATE 2,3-DIOXYGENASE FROM BREVIBACTERIUM FUSCUM (FULL LENGTH PROTEIN)
Descriptor: FE (III) ION, homoprotocatechuate 2,3-dioxygenase
Authors:Vetting, M.W, Wackett, L.P, Que, L, Lipscomb, J.D, Ohlendorf, D.H.
Deposit date:2003-07-16
Release date:2003-07-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystallographic comparison of manganese- and iron-dependent homoprotocatechuate 2,3-dioxygenases.
J.Bacteriol., 186, 2004
1F1R
DownloadVisualize
BU of 1f1r by Molmil
CRYSTAL STRUCTURE OF HOMOPROTOCATECHUATE 2,3-DIOXYGENASE FROM ARTHROBACTER GLOBIFORMIS (NATIVE, NON-CRYO)
Descriptor: HOMOPROTOCATECHUATE 2,3-DIOXYGENASE, MANGANESE (II) ION
Authors:Vetting, M.W, Lipscomb, J.D, Wackett, L.P, Que Jr, L, Ohlendorf, D.H.
Deposit date:2000-05-19
Release date:2003-06-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic comparison of manganese- and iron-dependent homoprotocatechuate 2,3-dioxygenases.
J.Bacteriol., 186, 2004
1F1V
DownloadVisualize
BU of 1f1v by Molmil
ANAEROBIC SUBSTRATE COMPLEX OF HOMOPROTOCATECHUATE 2,3-DIOXYGENASE FROM ARTHROBACTER GLOBIFORMIS. (COMPLEX WITH 3,4-DIHYDROXYPHENYLACETATE)
Descriptor: 2-(3,4-DIHYDROXYPHENYL)ACETIC ACID, HOMOPROTOCATECHUATE 2,3-DIOXYGENASE, MANGANESE (II) ION
Authors:Vetting, M.W, Lipscomb, J.D, Wackett, L.P, Que Jr, L, Ohlendorf, D.H.
Deposit date:2000-05-20
Release date:2003-06-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic comparison of manganese- and iron-dependent homoprotocatechuate 2,3-dioxygenases.
J.Bacteriol., 186, 2004
1F1U
DownloadVisualize
BU of 1f1u by Molmil
CRYSTAL STRUCTURE OF HOMOPROTOCATECHUATE 2,3-DIOXYGENASE FROM ARTHROBACTER GLOBIFORMIS (NATIVE, LOW TEMPERATURE)
Descriptor: HOMOPROTOCATECHUATE 2,3-DIOXYGENASE, MANGANESE (II) ION
Authors:Vetting, M.W, Lipscomb, J.D, Wackett, L.P, Que Jr, L, Ohlendorf, D.H.
Deposit date:2000-05-19
Release date:2003-06-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystallographic comparison of manganese- and iron-dependent homoprotocatechuate 2,3-dioxygenases.
J.Bacteriol., 186, 2004
7Q2U
DownloadVisualize
BU of 7q2u by Molmil
The crystal structure of the HINT1 Q62A mutant.
Descriptor: CACODYLATE ION, HEXAETHYLENE GLYCOL, Histidine triad nucleotide-binding protein 1, ...
Authors:Dolot, R.M, Strom, A.M, Wagner, C.R.
Deposit date:2021-10-26
Release date:2021-11-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Dynamic Long-Range Interactions Influence Substrate Binding and Catalysis by Human Histidine Triad Nucleotide-Binding Proteins (HINTs), Key Regulators of Multiple Cellular Processes and Activators of Antiviral ProTides.
Biochemistry, 61, 2022
3V5X
DownloadVisualize
BU of 3v5x by Molmil
Structure of FBXL5 hemerythrin domain, C2 cell
Descriptor: F-box/LRR-repeat protein 5, MU-OXO-DIIRON
Authors:Tomchick, D.R, Bruick, R.K, Thompson, J.W, Brautigam, C.A.
Deposit date:2011-12-17
Release date:2012-01-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and Molecular Characterization of Iron-sensing Hemerythrin-like Domain within F-box and Leucine-rich Repeat Protein 5 (FBXL5).
J.Biol.Chem., 287, 2012
3V5Y
DownloadVisualize
BU of 3v5y by Molmil
Structure of FBXL5 hemerythrin domain, P2(1) cell
Descriptor: F-box/LRR-repeat protein 5, MU-OXO-DIIRON
Authors:Tomchick, D.R, Bruick, R.K, Thompson, J.W, Brautigam, C.A.
Deposit date:2011-12-17
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and Molecular Characterization of Iron-sensing Hemerythrin-like Domain within F-box and Leucine-rich Repeat Protein 5 (FBXL5).
J.Biol.Chem., 287, 2012
5MND
DownloadVisualize
BU of 5mnd by Molmil
SFX structure of Cydia pomonella granulovirus using a double flow-focusing nozzle
Descriptor: Granulin
Authors:Oberthuer, D, Chapman, H, Doerner, K, Xavier, P.L.
Deposit date:2016-12-13
Release date:2017-03-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Double-flow focused liquid injector for efficient serial femtosecond crystallography.
Sci Rep, 7, 2017
3V5Z
DownloadVisualize
BU of 3v5z by Molmil
Structure of FBXL5 hemerythrin domain, C2 cell, grown anaerobically
Descriptor: F-box/LRR-repeat protein 5, MU-OXO-DIIRON
Authors:Tomchick, D.R, Bruick, R.K, Thompson, J.W, Brautigam, C.A.
Deposit date:2011-12-17
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1847 Å)
Cite:Structural and Molecular Characterization of Iron-sensing Hemerythrin-like Domain within F-box and Leucine-rich Repeat Protein 5 (FBXL5).
J.Biol.Chem., 287, 2012
6YD0
DownloadVisualize
BU of 6yd0 by Molmil
XFEL structure of the Soluble methane monooxygenase hydroxylase and regulatory subunit complex, from Methylosinus trichosporium OB3b, diferric state
Descriptor: FE (III) ION, GLYCEROL, Methane monooxygenase, ...
Authors:Srinivas, V, Hogbom, M.
Deposit date:2020-03-19
Release date:2020-09-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:High-Resolution XFEL Structure of the Soluble Methane Monooxygenase Hydroxylase Complex with its Regulatory Component at Ambient Temperature in Two Oxidation States.
J. Am. Chem. Soc., 142, 2020
6YDU
DownloadVisualize
BU of 6ydu by Molmil
XFEL structure of the Soluble methane monooxygenase hydroxylase and regulatory subunit complex, from Methylosinus trichosporium OB3b, reoxidized diferric state, 10s O2 exposure.
Descriptor: FE (III) ION, GLYCEROL, Methane monooxygenase, ...
Authors:Srinivas, V, Hogbom, M.
Deposit date:2020-03-21
Release date:2020-09-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:High-Resolution XFEL Structure of the Soluble Methane Monooxygenase Hydroxylase Complex with its Regulatory Component at Ambient Temperature in Two Oxidation States.
J. Am. Chem. Soc., 142, 2020
6YY3
DownloadVisualize
BU of 6yy3 by Molmil
XFEL structure of the Soluble methane monooxygenase hydroxylase and regulatory subunit complex, from Methylosinus trichosporium OB3b, t=0 diferrous state prior to oxygen activation
Descriptor: FE (II) ION, GLYCEROL, Methane monooxygenase, ...
Authors:Srinivas, V, Hogbom, M.
Deposit date:2020-05-04
Release date:2020-09-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:High-Resolution XFEL Structure of the Soluble Methane Monooxygenase Hydroxylase Complex with its Regulatory Component at Ambient Temperature in Two Oxidation States.
J. Am. Chem. Soc., 142, 2020
6YDI
DownloadVisualize
BU of 6ydi by Molmil
XFEL structure of the Soluble methane monooxygenase hydroxylase and regulatory subunit complex, from Methylosinus trichosporium OB3b, diferrous state
Descriptor: FE (II) ION, GLYCEROL, Methane monooxygenase, ...
Authors:Srinivas, V, Hogbom, M.
Deposit date:2020-03-20
Release date:2020-09-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:High-Resolution XFEL Structure of the Soluble Methane Monooxygenase Hydroxylase Complex with its Regulatory Component at Ambient Temperature in Two Oxidation States.
J. Am. Chem. Soc., 142, 2020
5G5J
DownloadVisualize
BU of 5g5j by Molmil
Crystal structure of human CYP3A4 bound to metformin
Descriptor: CYTOCHROME P450 3A4, Metformin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Sevrioukova, I.
Deposit date:2016-05-25
Release date:2017-06-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Heme Binding Biguanides Target Cytochrome P450-Dependent Cancer Cell Mitochondria.
Cell Chem Biol, 24, 2017
5TRX
DownloadVisualize
BU of 5trx by Molmil
Room temperature structure of an extradiol ring-cleaving dioxygenase from B.fuscum determined using serial femtosecond crystallography
Descriptor: CALCIUM ION, CHLORIDE ION, FE (II) ION, ...
Authors:Kovaleva, E.G, Oberthuer, D, Tolstikova, A, Mariani, V.
Deposit date:2016-10-27
Release date:2017-03-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Double-flow focused liquid injector for efficient serial femtosecond crystallography
Sci. Rep., 7, 2017
5U5Q
DownloadVisualize
BU of 5u5q by Molmil
12 Subunit RNA Polymerase II at Room Temperature collected using SFX
Descriptor: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
Authors:Bushnell, D.A, Oberthur, D, Mariani, V, Yefanov, O, Tolstikova, A, Barty, A.
Deposit date:2016-12-07
Release date:2017-03-29
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Double-flow focused liquid injector for efficient serial femtosecond crystallography.
Sci Rep, 7, 2017
5TE2
DownloadVisualize
BU of 5te2 by Molmil
Crystal structure of 7,8-diaminopelargonic acid synthase (BioA) from Mycobacterium tuberculosis, complexed with a mechanism-based inhibitor
Descriptor: 1,2-ETHANEDIOL, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, DI(HYDROXYETHYL)ETHER, ...
Authors:Maize, K.M, Eiden, C, Aldrich, C.C, Finzel, B.C.
Deposit date:2016-09-20
Release date:2017-05-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Rational Optimization of Mechanism-Based Inhibitors through Determination of the Microscopic Rate Constants of Inactivation.
J. Am. Chem. Soc., 139, 2017
4E37
DownloadVisualize
BU of 4e37 by Molmil
Crystal Structure of P. aeruginosa catalase, KatA tetramer
Descriptor: Catalase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTOPORPHYRIN IX CONTAINING FE
Authors:VanderWielen, B.D, Wilson, J.J, Kovall, R.A.
Deposit date:2012-03-09
Release date:2013-03-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:KatA, the Major Catalase in Pseudomonas aeruginosa, Assists in Protecting Anaerobic Bacteria From Metabolic and Exogenous Nitric Oxide
To be Published

222036

PDB entries from 2024-07-03

PDB statisticsPDBj update infoContact PDBjnumon