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8S2V
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BU of 8s2v by Molmil
SSX structure of Lysozyme grown in microfluidic droplets
Descriptor: CHLORIDE ION, Lysozyme C
Authors:Stubbs, J, Tews, I, Maly, M.
Deposit date:2024-02-19
Release date:2024-02-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Droplet microfluidics for time-resolved serial crystallography.
Iucrj, 11, 2024
2L0T
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BU of 2l0t by Molmil
Solution structure of the complex of ubiquitin and the VHS domain of Stam2
Descriptor: Signal transducing adapter molecule 2, Ubiquitin
Authors:Lange, A, Hoeller, D, Wienk, H, Marcillat, O, Lancelin, J, Walker, O.
Deposit date:2010-07-15
Release date:2010-12-15
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR reveals a different mode of binding of the Stam2 VHS domain to ubiquitin and diubiquitin.
Biochemistry, 50, 2011
8S2W
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BU of 8s2w by Molmil
SSX structure of Arabidopsis thaliana Pdx1.3 grown in seeded batch conditions
Descriptor: PHOSPHATE ION, Pyridoxal 5'-phosphate synthase subunit PDX1.3
Authors:Stubbs, J, Tews, I, Maly, M.
Deposit date:2024-02-19
Release date:2024-02-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Droplet microfluidics for time-resolved serial crystallography.
Iucrj, 11, 2024
8S2U
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BU of 8s2u by Molmil
SSX structure of Lysozyme grown in batch conditions
Descriptor: CHLORIDE ION, Lysozyme C
Authors:Stubbs, J, Tews, I, Maly, M.
Deposit date:2024-02-19
Release date:2024-02-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Droplet microfluidics for time-resolved serial crystallography.
Iucrj, 11, 2024
7R60
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BU of 7r60 by Molmil
BTK in complex with 18A
Descriptor: 2-(4-phenoxyphenoxy)-5-[(3R)-1-(prop-2-enoyl)piperidin-3-yl]pyridine-3-carboxamide, Tyrosine-protein kinase BTK
Authors:Gardberg, A.
Deposit date:2021-06-22
Release date:2021-10-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Discovery of Covalent Bruton's Tyrosine Kinase Inhibitors with Decreased CYP2C8 Inhibitory Activity.
Chemmedchem, 16, 2021
7R61
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BU of 7r61 by Molmil
BTK in complex with 25A
Descriptor: 5-{(3S)-1-[(Z)-iminomethyl]piperidin-3-yl}-2-(4-phenoxyphenoxy)pyridine-3-carboxamide, DIMETHYL SULFOXIDE, Tyrosine-protein kinase BTK
Authors:Gardberg, A.
Deposit date:2021-06-22
Release date:2021-10-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Discovery of Covalent Bruton's Tyrosine Kinase Inhibitors with Decreased CYP2C8 Inhibitory Activity.
Chemmedchem, 16, 2021
6UOT
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BU of 6uot by Molmil
Cryo-EM structure of the PrgHK periplasmic ring from the Salmonella SPI-1 type III secretion needle complex solved at 3.3 angstrom resolution
Descriptor: Lipoprotein PrgK, Protein PrgH
Authors:Butan, C, Galan, J.
Deposit date:2019-10-15
Release date:2020-07-01
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:High-resolution view of the type III secretion export apparatus in situ reveals membrane remodeling and a secretion pathway.
Proc.Natl.Acad.Sci.USA, 116, 2019
5FBO
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BU of 5fbo by Molmil
BTK-inhibitor co-structure
Descriptor: 4-[8-azanyl-3-[(2~{S})-1-[4-(dimethylamino)butanoyl]pyrrolidin-2-yl]imidazo[1,5-a]pyrazin-1-yl]-~{N}-(1,3-thiazol-2-yl)benzamide, 4-[8-azanyl-3-[(3~{R},6~{S})-1-cyclopropylcarbonyl-6-methyl-piperidin-3-yl]imidazo[1,5-a]pyrazin-1-yl]-3-fluoranyl-~{N}-[4-(trifluoromethyl)pyridin-2-yl]benzamide, Tyrosine-protein kinase BTK
Authors:Fischmann, T.O.
Deposit date:2015-12-14
Release date:2016-03-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.894 Å)
Cite:Discovery of 8-Amino-imidazo[1,5-a]pyrazines as Reversible BTK Inhibitors for the Treatment of Rheumatoid Arthritis.
ACS Med Chem Lett, 7, 2016
5FBN
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BU of 5fbn by Molmil
BTK kinase domain with inhibitor 1
Descriptor: 1,2-ETHANEDIOL, 4-[8-azanyl-3-[(2~{S})-1-[4-(dimethylamino)butanoyl]pyrrolidin-2-yl]imidazo[1,5-a]pyrazin-1-yl]-~{N}-(1,3-thiazol-2-yl)benzamide, 4-[8-azanyl-3-[(3~{R})-1-(3-methyloxetan-3-yl)carbonylpiperidin-3-yl]imidazo[1,5-a]pyrazin-1-yl]-~{N}-[4-(trifluoromethyl)pyridin-2-yl]benzamide, ...
Authors:Raaijmakers, H.C.A, Vu-Pham, D.
Deposit date:2015-12-14
Release date:2016-02-03
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Discovery of 8-Amino-imidazo[1,5-a]pyrazines as Reversible BTK Inhibitors for the Treatment of Rheumatoid Arthritis.
Acs Med.Chem.Lett., 7, 2016
7SGY
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BU of 7sgy by Molmil
Cannabis sativa bibenzyl synthase
Descriptor: Bibenzyl synthase, CHLORIDE ION
Authors:Kimber, M.S, Forrester, T.J.B.
Deposit date:2021-10-07
Release date:2021-12-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Bibenzyl synthesis in Cannabis sativa L.
Plant J., 109, 2022
7AK0
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BU of 7ak0 by Molmil
Human MALT1(329-729) in complex with a chromane urea containing inhibitor
Descriptor: 1-[4-[4-(aminomethyl)pyrazol-1-yl]-3-chloranyl-phenyl]-3-[(3~{R})-6-bromanyl-3,4-dihydro-2~{H}-chromen-3-yl]urea, Mucosa-associated lymphoid tissue lymphoma translocation protein 1
Authors:Renatus, M.
Deposit date:2020-09-29
Release date:2020-12-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.316 Å)
Cite:Discovery of Potent, Highly Selective, and In Vivo Efficacious, Allosteric MALT1 Inhibitors by Iterative Scaffold Morphing.
J.Med.Chem., 63, 2020
7AK1
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BU of 7ak1 by Molmil
Human MALT1(329-729) in complex with a chromane urea containing inhibitor
Descriptor: 1-(3-chloranyl-4-methoxy-phenyl)-3-[7-[(3~{S})-3-(methoxymethyl)morpholin-4-yl]-2-methyl-pyrazolo[1,5-a]pyrimidin-6-yl]urea, MAGNESIUM ION, Mucosa-associated lymphoid tissue lymphoma translocation protein 1
Authors:Renatus, M.
Deposit date:2020-09-29
Release date:2020-12-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.507 Å)
Cite:Discovery of Potent, Highly Selective, and In Vivo Efficacious, Allosteric MALT1 Inhibitors by Iterative Scaffold Morphing.
J.Med.Chem., 63, 2020
3MME
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BU of 3mme by Molmil
Structure and functional dissection of PG16, an antibody with broad and potent neutralization of HIV-1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PG16 HEAVY CHAIN FAB, ...
Authors:Pancera, M, McLellan, J, Zhou, T, Zhu, J, Kwong, P.
Deposit date:2010-04-19
Release date:2010-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.97 Å)
Cite:Crystal structure of PG16 and chimeric dissection with somatically related PG9: structure-function analysis of two quaternary-specific antibodies that effectively neutralize HIV-1.
J.Virol., 84, 2010
6UOV
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BU of 6uov by Molmil
Cryo-EM reconstruction of the PrgHK periplasmic ring from Salmonella's needle complex assembled in the absence of the export apparatus
Descriptor: Lipoprotein PrgK, Protein PrgH
Authors:Butan, C, Galan, J.
Deposit date:2019-10-15
Release date:2020-07-01
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:High-resolution view of the type III secretion export apparatus in situ reveals membrane remodeling and a secretion pathway.
Proc.Natl.Acad.Sci.USA, 116, 2019
6VHG
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BU of 6vhg by Molmil
Crystal structure of phosphorylated RET tyrosine kinase domain complexed with a pyrazolo[1,5-a]pyrimidine inhibitor
Descriptor: 3-(3,4-dimethoxyphenyl)-N~5~-(1-methylpiperidin-4-yl)-6-phenylpyrazolo[1,5-a]pyrimidine-5,7-diamine, ACETATE ION, CHLORIDE ION, ...
Authors:Lee, C.C, Spraggon, G.
Deposit date:2020-01-09
Release date:2020-02-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.303 Å)
Cite:Efficacy and Tolerability of Pyrazolo[1,5-a]pyrimidine RET Kinase Inhibitors for the Treatment of Lung Adenocarcinoma.
Acs Med.Chem.Lett., 11, 2020
8T5G
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BU of 8t5g by Molmil
SOS2 co-crystal structure with fragment bound (compound 12)
Descriptor: DIMETHYL SULFOXIDE, SULFATE ION, Son of sevenless homolog 2, ...
Authors:Gunn, R.J, Lawson, J.D, Ivetac, A, Ulaganathan, T, Coulombe, R, Fethiere, J.
Deposit date:2023-06-13
Release date:2024-01-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Discovery of Five SOS2 Fragment Hits with Binding Modes Determined by SOS2 X-Ray Cocrystallography.
J.Med.Chem., 67, 2024
8T5M
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BU of 8t5m by Molmil
SOS2 crystal structure with fragment bound (compound 14)
Descriptor: 1,2-ETHANEDIOL, 4-[(1R,2S)-1-hydroxy-2-{[2-(4-hydroxyphenyl)ethyl]amino}propyl]phenol, SULFATE ION, ...
Authors:Gunn, R.J, Lawson, J.D, Ivetac, A, Ulaganathan, T, Coulombe, R, Fethiere, J.
Deposit date:2023-06-14
Release date:2024-01-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Discovery of Five SOS2 Fragment Hits with Binding Modes Determined by SOS2 X-Ray Cocrystallography.
J.Med.Chem., 67, 2024
8T5R
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BU of 8t5r by Molmil
SOS2 crystal structure with fragment bound (compound 13)
Descriptor: 4-(aminomethyl)benzene-1-sulfonamide, SULFATE ION, Son of sevenless homolog 2
Authors:Gunn, R.J, Lawson, J.D, Ivetac, A, Ulaganathan, T, Coulombe, R, Fethiere, J.
Deposit date:2023-06-14
Release date:2024-01-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Discovery of Five SOS2 Fragment Hits with Binding Modes Determined by SOS2 X-Ray Cocrystallography.
J.Med.Chem., 67, 2024
3EWH
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BU of 3ewh by Molmil
Crystal structure of the VEGFR2 kinase domain in complex with a pyridyl-pyrimidine benzimidazole inhibitor
Descriptor: 1,2-ETHANEDIOL, N-[4-({3-[2-(methylamino)pyrimidin-4-yl]pyridin-2-yl}oxy)naphthalen-1-yl]-6-(trifluoromethyl)-1H-benzimidazol-2-amine, vascular endothelial growth factor receptor 2
Authors:Whittington, D.A, Long, A.M, Rose, P, Gu, Y, Zhao, H.
Deposit date:2008-10-15
Release date:2009-08-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Pyridyl-pyrimidine benzimidazole derivatives as potent, selective, and orally bioavailable inhibitors of Tie-2 kinase.
Bioorg.Med.Chem.Lett., 19, 2009
6YN8
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BU of 6yn8 by Molmil
Human MALT1(334-719) in complex with a tetrazole containing compound
Descriptor: 3-azanyl-3-methyl-~{N}-[(3~{R})-4-oxidanylidene-5-[[4-[2-(1~{H}-1,2,3,4-tetrazol-5-yl)phenyl]phenyl]methyl]-2,3-dihydro-1,5-benzoxazepin-3-yl]butanamide, Mucosa-associated lymphoid tissue lymphoma translocation protein 1
Authors:Renatus, M.
Deposit date:2020-04-11
Release date:2020-06-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.052 Å)
Cite:Stabilizing Inactive Conformations of MALT1 as an Effective Approach to Inhibit Its Protease Activity
Advanced Therapeutics, 3, 2020
7OB6
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BU of 7ob6 by Molmil
CPR-C4 - a conserved novel protease from the Candidate Phyla Radiation
Descriptor: CPR-C4, ZINC ION
Authors:Cornish, K.A.S, Pohl, E.
Deposit date:2021-04-21
Release date:2022-04-27
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.598 Å)
Cite:CPR-C4 is a highly conserved novel protease from the Candidate Phyla Radiation with remote structural homology to human vasohibins.
J.Biol.Chem., 298, 2022
7OB7
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BU of 7ob7 by Molmil
CPR-C4 - novel protease from the Candidate Phyla Radiation (CPR)
Descriptor: CPR-C4
Authors:Cornish, K.A.S, Pohl, E.
Deposit date:2021-04-21
Release date:2022-04-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.682 Å)
Cite:CPR-C4 is a highly conserved novel protease from the Candidate Phyla Radiation with remote structural homology to human vasohibins.
J.Biol.Chem., 298, 2022
7QDT
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BU of 7qdt by Molmil
Crystal structure of a mutant (P393GX) Thyroid Receptor Alpha ligand binding domain designed to model dominant negative human mutations.
Descriptor: 3,5,3'TRIIODOTHYRONINE, Isoform Alpha-1 of Thyroid hormone receptor alpha
Authors:Romartinez-Alonso, B, Fairall, L, Agostini, M, Chatterjee, K, Schwabe, J.
Deposit date:2021-11-30
Release date:2022-01-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure-Guided Approach to Relieving Transcriptional Repression in Resistance to Thyroid Hormone alpha.
Mol.Cell.Biol., 42, 2022
4J5G
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BU of 4j5g by Molmil
Crystal structure analysis of Streptomyces aureofaciens ribonuclease Sa T95A mutant
Descriptor: CACODYLATE ION, GLYCEROL, Guanyl-specific ribonuclease Sa, ...
Authors:Urbanikova, L, Sevcik, J.
Deposit date:2013-02-08
Release date:2014-05-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Contribution of hydrogen bonds to protein stability.
Protein Sci., 23, 2014
7P3S
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BU of 7p3s by Molmil
Crystal structure of Schistosoma mansoni HDAC8 complexed with a benzohydroxamate inhibitor 12
Descriptor: GLYCEROL, Histone deacetylase, POTASSIUM ION, ...
Authors:Shaik, T.B, Romier, C.
Deposit date:2021-07-08
Release date:2021-09-15
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.546 Å)
Cite:Synthesis, structure-activity relationships, cocrystallization and cellular characterization of novel smHDAC8 inhibitors for the treatment of schistosomiasis.
Eur.J.Med.Chem., 225, 2021

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