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9MI0
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BU of 9mi0 by Molmil
61-12A01 Fab in complex with HIV-1 GT1.1 v4.1 SOSIP Env trimer and RM20A3 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 61_12A01 heavy chain Fv, ...
Authors:Phulera, S, Ozorowski, G, Ward, A.B.
Deposit date:2024-12-12
Release date:2025-05-21
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Precise targeting of HIV broadly neutralizing antibody precursors in humans.
Science, 2025
9MIA
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BU of 9mia by Molmil
206-3G08 Fab in complex with HIV-1 GT1.1 v4.1 SOSIP Env trimer and RM20A3 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 206-3G08 heavy chain Fv, ...
Authors:Phulera, S, Ozorowski, G, Ward, A.B.
Deposit date:2024-12-12
Release date:2025-05-21
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Precise targeting of HIV broadly neutralizing antibody precursors in humans.
Science, 2025
9MIH
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BU of 9mih by Molmil
273-4D01 Fab in complex with HIV-1 BG505 SOSIP Env trimer and RM20A3 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 273-4D01 heavy chain Fv, ...
Authors:Phulera, S, Ozorowski, G, Ward, A.B.
Deposit date:2024-12-12
Release date:2025-05-21
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Precise targeting of HIV broadly neutralizing antibody precursors in humans.
Science, 2025
9MIF
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BU of 9mif by Molmil
Crystal structure of the VRC01-class antibody 9C09, derived from GT1.1 vaccination, in complex with eOD-GT8
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 9C09 Fab heavy chain, 9C09 Fab light chain, ...
Authors:Agrawal, S, Wilson, I.A.
Deposit date:2024-12-12
Release date:2025-05-28
Last modified:2025-06-04
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Precise targeting of HIV broadly neutralizing antibody precursors in humans.
Science, 2025
9MID
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BU of 9mid by Molmil
Crystal structure of the VRC01-class antibody 3G08, derived from GT1.1 vaccination, in complex with eOD-GT8
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3G08 Fab Heavy Chain, 3G08 Fab Light Chain, ...
Authors:Agrawal, S, Wilson, I.A.
Deposit date:2024-12-12
Release date:2025-05-28
Last modified:2025-06-04
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Precise targeting of HIV broadly neutralizing antibody precursors in humans.
Science, 2025
9MIC
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BU of 9mic by Molmil
Crystal structure of the VRC01-class antibody 4D01, derived from GT1.1 vaccination, in complex with eOD-GT8
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4D01 Fab heavy chain, 4D01 Fab light chain, ...
Authors:Agrawal, S, Wilson, I.A.
Deposit date:2024-12-12
Release date:2025-05-28
Last modified:2025-06-04
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Precise targeting of HIV broadly neutralizing antibody precursors in humans.
Science, 2025
9MJ6
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BU of 9mj6 by Molmil
Crystal structure of the VRC01-class antibody 7A03 derived from GT1.1 vaccination
Descriptor: 7A03 Fab heavy chain, 7A03 Fab light chain
Authors:Agrawal, S, Wilson, I.A.
Deposit date:2024-12-13
Release date:2025-05-28
Last modified:2025-06-04
Method:X-RAY DIFFRACTION (3.06 Å)
Cite:Precise targeting of HIV broadly neutralizing antibody precursors in humans.
Science, 2025
9MJI
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BU of 9mji by Molmil
Crystal structure of the VRC01-class antibody 9C09 derived from GT1.1 vaccination
Descriptor: 9C09 Fab heavy chain, 9C09 Fab light chain
Authors:Agrawal, S, Wilson, I.A.
Deposit date:2024-12-15
Release date:2025-05-28
Last modified:2025-06-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Precise targeting of HIV broadly neutralizing antibody precursors in humans.
Science, 2025
9MJD
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BU of 9mjd by Molmil
Crystal structure of the VRC01-class antibody 3G08
Descriptor: 3G08 Fab heavy chain, 3G08 Fab light chain
Authors:Agrawal, S, Wilson, I.A.
Deposit date:2024-12-14
Release date:2025-05-28
Last modified:2025-06-04
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Precise targeting of HIV broadly neutralizing antibody precursors in humans.
Science, 2025
9MIB
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BU of 9mib by Molmil
206-9C09 Fab in complex with HIV-1 GT1.1 v4.1 SOSIP Env trimer and RM20A3 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 206-9C09 heavy chain Fv, ...
Authors:Phulera, S, Ozorowski, G, Ward, A.B.
Deposit date:2024-12-12
Release date:2025-05-21
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Precise targeting of HIV broadly neutralizing antibody precursors in humans.
Science, 2025
3SDM
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BU of 3sdm by Molmil
Structure of oligomeric kinase/RNase Ire1 in complex with an oligonucleotide
Descriptor: Serine/threonine-protein kinase/endoribonuclease IRE1
Authors:Korennykh, A, Korostelev, A, Egea, P, Finer-Moore, J, Zhang, C, Stroud, R, Shokat, K, Walter, P.
Deposit date:2011-06-09
Release date:2011-07-13
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (6.6 Å)
Cite:Cofactor-mediated conformational control in the bifunctional kinase/RNase Ire1.
Bmc Biol., 9, 2011
7K9P
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BU of 7k9p by Molmil
Room temperature structure of NSP15 Endoribonuclease from SARS CoV-2 solved using SFX.
Descriptor: CITRIC ACID, Uridylate-specific endoribonuclease
Authors:Botha, S, Jernigan, R, Chen, J, Coleman, M.A, Frank, M, Grant, T.D, Hansen, D.T, Ketawala, G, Logeswaran, D, Martin-Garcia, J, Nagaratnam, N, Raj, A.L.L.X, Shelby, M, Yang, J.-H, Yung, M.C, Fromme, P.
Deposit date:2020-09-29
Release date:2020-10-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Room-temperature structural studies of SARS-CoV-2 protein NendoU with an X-ray free-electron laser.
Structure, 2022
3SDJ
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BU of 3sdj by Molmil
Structure of RNase-inactive point mutant of oligomeric kinase/RNase Ire1
Descriptor: N~2~-1H-benzimidazol-5-yl-N~4~-(3-cyclopropyl-1H-pyrazol-5-yl)pyrimidine-2,4-diamine, Serine/threonine-protein kinase/endoribonuclease IRE1
Authors:Korennykh, A, Korostelev, A, Egea, P, Finer-Moore, J, Zhang, C, Stroud, R, Shokat, K, Walter, P.
Deposit date:2011-06-09
Release date:2011-07-13
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.65 Å)
Cite:Structural and functional basis for RNA cleavage by Ire1.
Bmc Biol., 9, 2011
6TIK
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BU of 6tik by Molmil
Hepatitis B virus core shell--virus-like particle with NadA epitope
Descriptor: Capsid protein,Putative adhesin/invasin,Capsid protein,Factor H-binding protein
Authors:Roseman, A.M, Colllins, R.F, Derrick, J.P.
Deposit date:2019-11-22
Release date:2020-04-29
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:An assessment of the use of Hepatitis B Virus core protein virus-like particles to display heterologous antigens from Neisseria meningitidis.
Vaccine, 38, 2020
3CL9
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BU of 3cl9 by Molmil
Structure of bifunctional TcDHFR-TS in complex with MTX
Descriptor: 1,2-ETHANEDIOL, 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, Bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS), ...
Authors:Schormann, N, Senkovich, O, Chattopadhyay, D.
Deposit date:2008-03-18
Release date:2009-01-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure-based approach to pharmacophore identification, in silico screening, and three-dimensional quantitative structure-activity relationship studies for inhibitors of Trypanosoma cruzi dihydrofolate reductase function.
Proteins, 73, 2008
3SMI
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BU of 3smi by Molmil
Human poly(ADP-ribose) polymerase 14 (Parp14/Artd8) - catalytic domain in complex with a quinazoline inhibitor
Descriptor: 2-{[(3-amino-1H-1,2,4-triazol-5-yl)sulfanyl]methyl}-8-methylquinazolin-4(3H)-one, Poly [ADP-ribose] polymerase 14
Authors:Karlberg, T, Moche, M, Arrowsmith, C.H, Berglund, H, Bountra, C, Edwards, A.M, Ekblad, T, Graslund, S, Kouznetsova, E, Nordlund, P, Nyman, T, Thorsell, A.G, Tresaugues, L, Weigelt, J, Schuler, H, Structural Genomics Consortium (SGC)
Deposit date:2011-06-28
Release date:2011-07-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Family-wide chemical profiling and structural analysis of PARP and tankyrase inhibitors.
Nat.Biotechnol., 30, 2012
3SE2
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BU of 3se2 by Molmil
Human poly(ADP-ribose) polymerase 14 (PARP14/ARTD8) - catalytic domain in complex with 6(5H)-phenanthridinone
Descriptor: 3-aminobenzamide, CHLORIDE ION, GLYCEROL, ...
Authors:Karlberg, T, Schutz, P, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Edwards, A.M, Ekblad, T, Graslund, S, Kouznetsova, E, Moche, M, Nordlund, P, Nyman, T, Thorsell, A.G, Tresaugues, L, Weigelt, J, Siponen, M.I, Schuler, H, Structural Genomics Consortium (SGC)
Deposit date:2011-06-10
Release date:2011-07-06
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Family-wide chemical profiling and structural analysis of PARP and tankyrase inhibitors.
Nat.Biotechnol., 30, 2012
7KDT
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BU of 7kdt by Molmil
Human Tom70 in complex with SARS CoV2 Orf9b
Descriptor: Mitochondrial import receptor subunit TOM70, ORF9b protein
Authors:QCRG Structural Biology Consortium
Deposit date:2020-10-09
Release date:2020-10-21
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Comparative host-coronavirus protein interaction networks reveal pan-viral disease mechanisms.
Science, 370, 2020
1L3N
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BU of 1l3n by Molmil
The Solution Structure of Reduced Dimeric Copper Zinc SOD: the Structural Effects of Dimerization
Descriptor: COPPER (I) ION, ZINC ION, superoxide dismutase [Cu-Zn]
Authors:Banci, L, Bertini, I, Cramaro, F, Del Conte, R, Viezzoli, M.S.
Deposit date:2002-02-28
Release date:2002-05-08
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:The solution structure of reduced dimeric copper zinc superoxide dismutase. The structural effects of dimerization
Eur.J.Biochem., 269, 2002
7RLO
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BU of 7rlo by Molmil
Structure of the human eukaryotic translation initiation factor 2B (eIF2B) in complex with a viral protein NSs
Descriptor: Non-structural protein NS-S, Translation initiation factor eIF-2B subunit alpha, Translation initiation factor eIF-2B subunit beta, ...
Authors:Wang, L, Schoof, M, Cogan, J, Lawrence, R, Boone, M, Wuerth, J, Frost, M, Walter, P.
Deposit date:2021-07-26
Release date:2021-12-22
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Viral evasion of the integrated stress response through antagonism of eIF2-P binding to eIF2B.
Nat Commun, 12, 2021
6TQL
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BU of 6tql by Molmil
Cryo-EM of elastase-treated human uromodulin (UMOD)/Tamm-Horsfall protein (THP) filament
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Stsiapanava, A, Xu, C, Carroni, M, Wu, B, Jovine, L.
Deposit date:2019-12-16
Release date:2020-11-04
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.96 Å)
Cite:Cryo-EM structure of native human uromodulin, a zona pellucida module polymer.
Embo J., 39, 2020
6TQK
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BU of 6tqk by Molmil
Cryo-EM of native human uromodulin (UMOD)/Tamm-Horsfall protein (THP) filament.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Uromodulin, ...
Authors:Stsiapanava, A, Xu, C, Carroni, M, Wu, B, Jovine, L.
Deposit date:2019-12-16
Release date:2020-11-04
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Cryo-EM structure of native human uromodulin, a zona pellucida module polymer.
Embo J., 39, 2020
6THX
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BU of 6thx by Molmil
IRAK4 in complex with inhibitor
Descriptor: 2-[4-[(1-methylcyclopropyl)amino]-2-[(1-methylpyrazol-4-yl)amino]pyrido[3,2-d]pyrimidin-6-yl]ethanenitrile, Interleukin-1 receptor-associated kinase 4
Authors:Xue, Y, Aagaard, A, Degorce, S.L.
Deposit date:2019-11-21
Release date:2020-10-28
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Improving metabolic stability and removing aldehyde oxidase liability in a 5-azaquinazoline series of IRAK4 inhibitors.
Bioorg.Med.Chem., 28, 2020
5K72
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BU of 5k72 by Molmil
IRAK4 in complex with Compound 21
Descriptor: Interleukin-1 receptor-associated kinase 4, SULFATE ION, ~{N}4,~{N}4-dimethyl-~{N}1-[5-(oxan-4-yl)-7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl]cyclohexane-1,4-diamine
Authors:Ferguson, A.D.
Deposit date:2016-05-25
Release date:2017-12-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Discovery and Optimization of Pyrrolopyrimidine Inhibitors of Interleukin-1 Receptor Associated Kinase 4 (IRAK4) for the Treatment of Mutant MYD88L265P Diffuse Large B-Cell Lymphoma.
J. Med. Chem., 60, 2017
5K7G
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BU of 5k7g by Molmil
IRAK4 in complex with AZ3862
Descriptor: (3~{a}~{S},7~{a}~{R})-1-methyl-5-[4-[[5-(oxan-4-yl)-7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl]amino]cyclohexyl]-3,3~{a},4,6,7,7~{a}-hexahydropyrrolo[3,2-c]pyridin-2-one, Interleukin-1 receptor-associated kinase 4, SULFATE ION
Authors:Ferguson, A.D.
Deposit date:2016-05-26
Release date:2017-12-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Discovery and Optimization of Pyrrolopyrimidine Inhibitors of Interleukin-1 Receptor Associated Kinase 4 (IRAK4) for the Treatment of Mutant MYD88L265P Diffuse Large B-Cell Lymphoma.
J. Med. Chem., 60, 2017

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PDB entries from 2025-07-09

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