Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB形式変換不可の PDB エントリー
8Q62
DownloadVisualize
BU of 8q62 by Molmil
Early closed conformation of the g-tubulin ring complex
分子名称: Gamma-tubulin complex component 2, Gamma-tubulin complex component 3, Gamma-tubulin complex component 4, ...
著者Llorca, O, Serna, M, Fernandez-Leiro, R.
登録日2023-08-10
公開日2024-02-07
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.72 Å)
主引用文献Transition of human gamma-tubulin ring complex into a closed conformation during microtubule nucleation.
Science, 383, 2024
8Q6J
DownloadVisualize
BU of 8q6j by Molmil
Atomic structure and conformational variability of the HER2-Trastuzumab-Pertuzumab complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Pertuzumab Fab heavy chain, Pertuzumab Fab light chain, ...
著者Ruedas, R, Vuillemot, R, Tubiana, T, Winter, J.M, Pieri, L, Arteni, A.A, Samson, C, Jonic, J, Mathieu, M, Bressanelli, S.
登録日2023-08-11
公開日2023-09-20
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structure and conformational variability of the HER2-trastuzumab-pertuzumab complex.
J.Struct.Biol., 216, 2024
8Q6T
DownloadVisualize
BU of 8q6t by Molmil
Helical reconstruction of the relaxed thick filament from FIB milled left ventricular mouse myofibrils
分子名称: Myosin binding protein C, cardiac, Myosin light chain 3, ...
著者Tamborrini, D, Raunser, S.
登録日2023-08-14
公開日2023-11-01
最終更新日2023-12-06
実験手法ELECTRON MICROSCOPY (18 Å)
主引用文献Structure of the native myosin filament in the relaxed cardiac sarcomere.
Nature, 623, 2023
8Q7X
DownloadVisualize
BU of 8q7x by Molmil
Structure of the recycling U5 snRNP bound to chaperone CD2BP2 (State 4)
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, CD2 antigen cytoplasmic tail-binding protein 2, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Riabov Bassat, D, Plaschka, C, Vorlaender, M.K.
登録日2023-08-17
公開日2024-04-17
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Structural basis of human U5 snRNP late biogenesis and recycling.
Nat.Struct.Mol.Biol., 31, 2024
8Q84
DownloadVisualize
BU of 8q84 by Molmil
Outer kinetochore Dam1 protomer dimer Ndc80-Nuf2 coiled-coil complex
分子名称: DASH complex subunit ASK1, DASH complex subunit DAD1, DASH complex subunit DAD2, ...
著者Muir, K.W, Barford, D.
登録日2023-08-17
公開日2023-12-06
最終更新日2023-12-20
実験手法ELECTRON MICROSCOPY (3.15 Å)
主引用文献Structural mechanism of outer kinetochore Dam1-Ndc80 complex assembly on microtubules.
Science, 382, 2023
8QBT
DownloadVisualize
BU of 8qbt by Molmil
E. coli ApdP-stalled ribosomal complex
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S11, ...
著者Morici, M, Wilson, D.N.
登録日2023-08-25
公開日2024-03-20
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献RAPP-containing arrest peptides induce translational stalling by short circuiting the ribosomal peptidyltransferase activity.
Nat Commun, 15, 2024
8QBX
DownloadVisualize
BU of 8qbx by Molmil
Chimeric Adenovirus-derived dodecamer
分子名称: Penton protein
著者Buzas, D, Borucu, U, Bufton, J, Kapadalakere, S.Y, Toelzer, C.
登録日2023-08-25
公開日2023-12-27
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Engineering the ADDobody protein scaffold for generation of high-avidity ADDomer super-binders.
Structure, 32, 2024
8QC4
DownloadVisualize
BU of 8qc4 by Molmil
M. tuberculosis salicylate synthase MbtI in complex with 5-(3-carboxyphenyl)furan-2-carboxylic acid
分子名称: 5-(3-carboxyphenyl)furan-2-carboxylic acid, GLYCEROL, SULFATE ION, ...
著者Mori, M, Villa, S, Meneghetti, F, Bellinzoni, M.
登録日2023-08-25
公開日2023-11-15
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.578 Å)
主引用文献Structural Study of a New MbtI-Inhibitor Complex: Towards an Optimized Model for Structure-Based Drug Discovery.
Pharmaceuticals, 16, 2023
8QCQ
DownloadVisualize
BU of 8qcq by Molmil
B. subtilis ApdA-stalled ribosomal complex
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Morici, M, Wilson, D.N.
登録日2023-08-28
公開日2024-03-20
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献RAPP-containing arrest peptides induce translational stalling by short circuiting the ribosomal peptidyltransferase activity.
Nat Commun, 15, 2024
8QDO
DownloadVisualize
BU of 8qdo by Molmil
Crystal structure of the tegument protein UL82 (pp71) from Human Cytomegalovirus
分子名称: Protein pp71, TETRAETHYLENE GLYCOL
著者Bresch, I.P, Eberhage, J, Reubold, T.F, Eschenburg, S.
登録日2023-08-30
公開日2024-02-28
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of the tegument protein UL82 (pp71) from human cytomegalovirus.
Protein Sci., 33, 2024
8QF2
DownloadVisualize
BU of 8qf2 by Molmil
Beta-L-Arabinofurano-cyclitol Aziridines are Cysteine-directed Broad-spectrum Inhibitors and Activity-based Probes for Retaining Beta-L-arabinofuranosidases
分子名称: (1~{S},2~{S},3~{S},4~{R})-4-azanyl-3-(hydroxymethyl)cyclopentane-1,2-diol, Non-reducing end beta-L-arabinofuranosidase, ZINC ION
著者Borlandelli, V, Offen, W.A, Moroz, O, Nin-Hill, A, McGregor, N, Binkhorst, L, Armstrong, Z, Ishiwata, A, Artola, M, Rovira, C, Davies, G.J, Overkleeft, H.
登録日2023-09-02
公開日2023-12-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献beta-l- Arabino furano-cyclitol Aziridines Are Covalent Broad-Spectrum Inhibitors and Activity-Based Probes for Retaining beta-l-Arabinofuranosidases.
Acs Chem.Biol., 18, 2023
8QFD
DownloadVisualize
BU of 8qfd by Molmil
UFL1 E3 ligase bound 60S ribosome
分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Makhlouf, L, Kulathu, Y, Zeqiraj, E.
登録日2023-09-04
公開日2024-02-21
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献The UFM1 E3 ligase recognizes and releases 60S ribosomes from ER translocons.
Nature, 627, 2024
8QFY
DownloadVisualize
BU of 8qfy by Molmil
Crystal structure of high affinity TCR in complex with pHLA harbouring bacterial peptide
分子名称: ACETATE ION, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
著者Pengelly, R.J, Robinson, R.A.
登録日2023-09-05
公開日2024-05-15
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献An HLA-E-targeted TCR bispecific molecule redirects T cell immunity against Mycobacterium tuberculosis.
Proc.Natl.Acad.Sci.USA, 121, 2024
8QHS
DownloadVisualize
BU of 8qhs by Molmil
Cryo-EM structure of the monocin tail-tube, MttP.
分子名称: Antigen A
著者Nadejda, S, Lichtenstein, R, Schlussel, S, Azulay, G, Borovok, I, Holdengraber, V, Elad, N, Wolf, S.G, Zalk, R, Zarivach, R, Frank, G.A, Herskovits, A.A.
登録日2023-09-10
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Tailocin cell factories
To Be Published
8QIJ
DownloadVisualize
BU of 8qij by Molmil
Crystallographic Structure of a Salicylate Synthase from M. abscessus (Mab-SaS)
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Cassetta, A, Covaceuszach, S, Tomaiuolo, M, Meneghetti, F, Villa, S, Mori, M, Chiarelli, L.R, Mangiatordi, G.F.
登録日2023-09-12
公開日2024-01-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.073 Å)
主引用文献Structural basis for specific inhibition of salicylate synthase from Mycobacterium abscessus.
Eur.J.Med.Chem., 265, 2024
8QKT
DownloadVisualize
BU of 8qkt by Molmil
Structure of a nucleosome composed of a palindromic 167-base pair blunt-ended DNA fragment
分子名称: DNA (167-MER), Histone H2A, Histone H2B type 1-J, ...
著者Ma, Z, Davey, C.A.
登録日2023-09-17
公開日2023-10-18
実験手法X-RAY DIFFRACTION (3.261 Å)
主引用文献Structure of a nucleosome composed of a palindromic 167-base pair blunt-ended DNA fragment
To Be Published
8QMA
DownloadVisualize
BU of 8qma by Molmil
Structure of the plastid-encoded RNA polymerase complex (PEP) from Sinapis alba
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者do Prado, P.F.V, Ahrens, F.M, Pfannschmidt, T, Hillen, H.S.
登録日2023-09-21
公開日2024-03-06
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure of the multi-subunit chloroplast RNA polymerase.
Mol.Cell, 84, 2024
8QN5
DownloadVisualize
BU of 8qn5 by Molmil
M. tuberculosis salicylate synthase MbtI in complex with methyl-AMT (new crystal form)
分子名称: 3-{[(1Z)-1-carboxyprop-1-en-1-yl]oxy}-2-hydroxybenzoic acid, AMMONIUM ION, CITRATE ANION, ...
著者Mori, M, Villa, S, Meneghetti, M, Bellinzoni, M.
登録日2023-09-25
公開日2023-11-15
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.544 Å)
主引用文献Structural Study of a New MbtI-Inhibitor Complex: Towards an Optimized Model for Structure-Based Drug Discovery.
Pharmaceuticals, 16, 2023
8QNZ
DownloadVisualize
BU of 8qnz by Molmil
Crystal Structure of a Class D Carbapenemase Complexed with Hydrolyzed Imipenem
分子名称: (2R)-2-[(2S,3R)-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-(2-methanimidamidoethylsulfanyl)-2,3-dihydro-1H-pyrrole -5-carboxylic acid, 1-BUTANOL, BROMIDE ION, ...
著者Zhou, Q, He, Y, Jin, Y.
登録日2023-09-27
公開日2023-11-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献An Ion-Pair Induced Intermediate Complex Captured in Class D Carbapenemase Reveals Chloride Ion as a Janus Effector Modulating Activity.
Acs Cent.Sci., 9, 2023
8QO0
DownloadVisualize
BU of 8qo0 by Molmil
Asymmetric structure of the Borrelia bacteriophage BB1 procapsid, 3D class 2
分子名称: Cytosolic protein, DUF228 domain-containing protein, Decoration protein P03, ...
著者Rumnieks, J, Fuzik, T, Tars, K.
登録日2023-09-27
公開日2023-12-27
実験手法ELECTRON MICROSCOPY (10.62 Å)
主引用文献Structure of the Borrelia Bacteriophage phi BB1 Procapsid.
J.Mol.Biol., 435, 2023
8QO1
DownloadVisualize
BU of 8qo1 by Molmil
Asymmetric structure of the Borrelia bacteriophage BB1 procapsid, 3D class 3
分子名称: Cytosolic protein, DUF228 domain-containing protein, Decoration protein P03, ...
著者Rumnieks, J, Fuzik, T, Tars, K.
登録日2023-10-11
公開日2023-12-27
実験手法ELECTRON MICROSCOPY (9.76 Å)
主引用文献Structure of the Borrelia Bacteriophage phi BB1 Procapsid.
J.Mol.Biol., 435, 2023
8QO9
DownloadVisualize
BU of 8qo9 by Molmil
Cryo-EM structure of a human spliceosomal B complex protomer
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, MINX pre-mRNA, Microfibrillar-associated protein 1, ...
著者Zhang, Z, Kumar, V, Dybkov, O, Will, C.L, Urlaub, H, Stark, H, Luehrmann, R.
登録日2023-09-28
公開日2024-01-24
実験手法ELECTRON MICROSCOPY (5.29 Å)
主引用文献New insights into the functions of B complex proteins revealed by cryo-EM of dimerized spliceosomes
To Be Published
8QOA
DownloadVisualize
BU of 8qoa by Molmil
Structure of SecM-stalled Escherichia coli 70S ribosome
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S16, ...
著者Gersteuer, F, Morici, M, Wilson, D.N.
登録日2023-09-28
公開日2024-03-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2 Å)
主引用文献The SecM arrest peptide traps a pre-peptide bond formation state of the ribosome.
Nat Commun, 15, 2024
8QOI
DownloadVisualize
BU of 8qoi by Molmil
Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNA
分子名称: 18S rRNA (1740-MER), 28S rRNA (3773-MER), 40S ribosomal protein S10, ...
著者Holvec, S, Barchet, C, Frechin, L, Hazemann, I, von Loeffelholz, O, Klaholz, B.P.
登録日2023-09-29
公開日2024-06-12
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (1.9 Å)
主引用文献The structure of the human 80S ribosome at 1.9 angstrom resolution reveals the molecular role of chemical modifications and ions in RNA.
Nat.Struct.Mol.Biol., 2024
8QOX
DownloadVisualize
BU of 8qox by Molmil
Two-component assembly of SlaA and SlaB S-layer proteins of Sulfolobus acidocaldarius
分子名称: Conserved membrane protein, S-layer protein A
著者Gambelli, L, McLaren, M, Isupov, M, Conners, R, Daum, B.
登録日2023-09-29
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (11.2 Å)
主引用文献Structure of the two-component S-layer of the archaeon Sulfolobus acidocaldarius.
Elife, 13, 2024

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon