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8QMA

Structure of the plastid-encoded RNA polymerase complex (PEP) from Sinapis alba

This is a non-PDB format compatible entry.
Summary for 8QMA
Entry DOI10.2210/pdb8qma/pdb
EMDB information18496
DescriptorPAP4, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta'', ... (20 entities in total)
Functional Keywordstranscription, chloroplasts, gene expression, rna, polymerase
Biological sourceSinapis alba
More
Total number of polymer chains19
Total formula weight1117948.92
Authors
do Prado, P.F.V.,Ahrens, F.M.,Pfannschmidt, T.,Hillen, H.S. (deposition date: 2023-09-21, release date: 2024-03-06, Last modification date: 2024-03-20)
Primary citationdo Prado, P.F.V.,Ahrens, F.M.,Liebers, M.,Ditz, N.,Braun, H.P.,Pfannschmidt, T.,Hillen, H.S.
Structure of the multi-subunit chloroplast RNA polymerase.
Mol.Cell, 84:910-, 2024
Cited by
PubMed Abstract: Chloroplasts contain a dedicated genome that encodes subunits of the photosynthesis machinery. Transcription of photosynthesis genes is predominantly carried out by a plastid-encoded RNA polymerase (PEP), a nearly 1 MDa complex composed of core subunits with homology to eubacterial RNA polymerases (RNAPs) and at least 12 additional chloroplast-specific PEP-associated proteins (PAPs). However, the architecture of this complex and the functions of the PAPs remain unknown. Here, we report the cryo-EM structure of a 19-subunit PEP complex from Sinapis alba (white mustard). The structure reveals that the PEP core resembles prokaryotic and nuclear RNAPs but contains chloroplast-specific features that mediate interactions with the PAPs. The PAPs are unrelated to known transcription factors and arrange around the core in a unique fashion. Their structures suggest potential functions during transcription in the chemical environment of chloroplasts. These results reveal structural insights into chloroplast transcription and provide a framework for understanding photosynthesis gene expression.
PubMed: 38428434
DOI: 10.1016/j.molcel.2024.02.003
PDB entries with the same primary citation
Experimental method
ELECTRON MICROSCOPY (3.5 Å)
Structure validation

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PDB entries from 2024-11-06

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