8QMA

Structure of the plastid-encoded RNA polymerase complex (PEP) from Sinapis alba

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000428	cellular_component	DNA-directed RNA polymerase complex
A	0003677	molecular_function	DNA binding
A	0003899	molecular_function	DNA-directed 5'-3' RNA polymerase activity
A	0006351	biological_process	DNA-templated transcription
A	0009507	cellular_component	chloroplast
A	0016779	molecular_function	nucleotidyltransferase activity
A	0032549	molecular_function	ribonucleoside binding
B	0000428	cellular_component	DNA-directed RNA polymerase complex
B	0003677	molecular_function	DNA binding
B	0003899	molecular_function	DNA-directed 5'-3' RNA polymerase activity
B	0006351	biological_process	DNA-templated transcription
B	0008270	molecular_function	zinc ion binding
B	0009507	cellular_component	chloroplast
B	0016779	molecular_function	nucleotidyltransferase activity
B	0046872	molecular_function	metal ion binding
C	0000428	cellular_component	DNA-directed RNA polymerase complex
C	0003677	molecular_function	DNA binding
C	0003899	molecular_function	DNA-directed 5'-3' RNA polymerase activity
C	0005737	cellular_component	cytoplasm
C	0006351	biological_process	DNA-templated transcription
C	0009507	cellular_component	chloroplast
C	0016779	molecular_function	nucleotidyltransferase activity
C	0046983	molecular_function	protein dimerization activity
D	0000428	cellular_component	DNA-directed RNA polymerase complex
D	0003677	molecular_function	DNA binding
D	0003899	molecular_function	DNA-directed 5'-3' RNA polymerase activity
D	0005737	cellular_component	cytoplasm
D	0006351	biological_process	DNA-templated transcription
D	0009507	cellular_component	chloroplast
D	0016779	molecular_function	nucleotidyltransferase activity
D	0046983	molecular_function	protein dimerization activity
F	0000427	cellular_component	plastid-encoded plastid RNA polymerase complex
F	0003676	molecular_function	nucleic acid binding
F	0003723	molecular_function	RNA binding
G	0004784	molecular_function	superoxide dismutase activity
G	0006801	biological_process	superoxide metabolic process
G	0046872	molecular_function	metal ion binding
H	0005634	cellular_component	nucleus
H	0006355	biological_process	regulation of DNA-templated transcription
H	0009416	biological_process	response to light stimulus
H	0009507	cellular_component	chloroplast
H	0090228	biological_process	positive regulation of red or far-red light signaling pathway
K	0000427	cellular_component	plastid-encoded plastid RNA polymerase complex
L	0004784	molecular_function	superoxide dismutase activity
L	0006801	biological_process	superoxide metabolic process
L	0046872	molecular_function	metal ion binding
M	0015035	molecular_function	protein-disulfide reductase activity
M	0045454	biological_process	cell redox homeostasis
N	0015035	molecular_function	protein-disulfide reductase activity
N	0045454	biological_process	cell redox homeostasis
O	0005524	molecular_function	ATP binding
O	0005737	cellular_component	cytoplasm
O	0008360	biological_process	regulation of cell shape
O	0009058	biological_process	biosynthetic process
O	0016881	molecular_function	acid-amino acid ligase activity
O	0051301	biological_process	cell division
P	0000427	cellular_component	plastid-encoded plastid RNA polymerase complex
P	0042793	biological_process	plastid transcription
S	0016301	molecular_function	kinase activity
T	0000287	molecular_function	magnesium ion binding
T	0000428	cellular_component	DNA-directed RNA polymerase complex
T	0003677	molecular_function	DNA binding
T	0003899	molecular_function	DNA-directed 5'-3' RNA polymerase activity
T	0006351	biological_process	DNA-templated transcription
T	0008270	molecular_function	zinc ion binding
T	0009507	cellular_component	chloroplast
T	0016779	molecular_function	nucleotidyltransferase activity
T	0046872	molecular_function	metal ion binding

Functional Information from PROSITE/UniProt

site_id	PS00088
Number of Residues	8
Details	SOD_MN Manganese and iron superoxide dismutases signature. DtWEHAYY

Chain	Residue	Details
L	ASP223-TYR230
G	ASP212-TYR219

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site_id	PS00583
Number of Residues	25
Details	PFKB_KINASES_1 pfkB family of carbohydrate kinases signature 1. GGpPsNVAisHvRLGgraafmgkvG

Chain	Residue	Details
S	GLY137-GLY161

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site_id	PS01166
Number of Residues	13
Details	RNA_POL_BETA RNA polymerases beta chain signature. GdKVAGrHGNKGI

Chain	Residue	Details
A	GLY819-ILE831

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