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Structure paper

TitleCrystal structures of human Chymase and Cathepsin G
Journal, issue, pagesTo be published
Publish dateApr 19, 2024 (structure data deposition date)
AuthorsMarkus, R. / Tosstorff, A.
External linksSearch PubMed
MethodsX-ray diffraction
Resolution1.13 - 2.17 Å
Structure data

PDB-7h60:
THE 1.875 A CRYSTAL STRUCTURE OF HUMAN CHYMASE IN COMPLEX WITH 3-[[ethoxycarbonyl(methyl)amino]methyl]-5-fluoro-1-(naphthalen-1-ylmethyl)indole-2-carboxylic acid - ZN CRYSTAL FORM
Method: X-RAY DIFFRACTION / Resolution: 1.88 Å

PDB-7h61:
THE 1.76 A CRYSTAL STRUCTURE OF HUMAN CHYMASE IN COMPLEX WITH N-[2-[6-ethyl-2-[(2-hydroxy-5-oxo-3-phenylcyclopenten-1-yl)-phenylmethyl]-1H-indol-3-yl]ethyl]acetamide
Method: X-RAY DIFFRACTION / Resolution: 1.74 Å

PDB-7h62:
THE 1.61 A CRYSTAL STRUCTURE OF HUMAN CHYMASE IN COMPLEX WITH 5-fluoro-3-methyl-N-[4-pyridin-4-yl-2-(trifluoromethyl)phenyl]-1-benzothiophene-2-sulfonamide
Method: X-RAY DIFFRACTION / Resolution: 1.61 Å

PDB-7h63:
THE 1.65 A CRYSTAL STRUCTURE OF HUMAN CHYMASE IN COMPLEX WITH 4-[(5-fluoro-3-propan-2-yl-1H-indol-2-yl)-phenylmethyl]-3-hydroxy-2-propan-2-yl-1,2-dihydropyrrol-5-one (VINYLOGOUS ACID)
Method: X-RAY DIFFRACTION / Resolution: 1.65 Å

PDB-7h64:
THE 1.68 A CRYSTAL STRUCTURE OF HUMAN CHYMASE IN COMPLEX WITH 5-fluoro-3-[(methoxycarbonylamino)methyl]-1-(naphthalen-1-ylmethyl)indole-2-carboxylic acid
Method: X-RAY DIFFRACTION / Resolution: 1.68 Å

PDB-7h65:
THE 1.8 A CRYSTAL STRUCTURE OF HUMAN CHYMASE IN COMPLEX WITH N-[1-[2-[[2-hydroxy-3-methyl-3-(4-methylphenyl)-4-oxocyclobuten-1-yl]-phenylmethyl]-6-methyl-1H-indol-3-yl]-2-methylpropan-2-yl]acetamide
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-7h66:
THE 1.13 A CRYSTAL STRUCTURE OF HUMAN CHYMASE IN COMPLEX WITH 3-hydroxy-4-methyl-2-[naphthalen-2-yl(phenyl)methyl]-4-phenylcyclobut-2-en-1-one
Method: X-RAY DIFFRACTION / Resolution: 1.13 Å

PDB-7h67:
THE 1.35 A CRYSTAL STRUCTURE OF HUMAN CHYMASE IN COMPLEX WITH 2-[(3,5-dimethyl-1-benzothiophen-2-yl)-phenylmethyl]-3-hydroxy-4-methyl-4-phenylcyclobut-2-en-1-one
Method: X-RAY DIFFRACTION / Resolution: 1.35 Å

PDB-7h68:
THE 1.25 A CRYSTAL STRUCTURE OF HUMAN CHYMASE IN COMPLEX WITH (2R)-2-benzyl-4-[(R)-(5-fluoro-3-methyl-1H-indol-2-yl)-phenylmethyl]-3-hydroxy-2H-furan-5-one
Method: X-RAY DIFFRACTION / Resolution: 1.25 Å

PDB-7h69:
THE 1.67 A CRYSTAL STRUCTURE OF HUMAN CHYMASE IN COMPLEX WITH 1-[(7-fluoronaphthalen-1-yl)methyl]indole-2-carboxylic acid
Method: X-RAY DIFFRACTION / Resolution: 1.67 Å

PDB-7h6a:
THE 1.68 A CRYSTAL STRUCTURE OF HUMAN CHYMASE IN COMPLEX WITH 3-[2-(dimethylamino)-2-oxoethyl]-5-fluoro-1-(naphthalen-1-ylmethyl)indole-2-carboxylic acid (2-carboxy indole)
Method: X-RAY DIFFRACTION / Resolution: 1.68 Å

PDB-7h6b:
THE 2.17 A CRYSTAL STRUCTURE OF HUMAN CHYMASE IN COMPLEX WITH methyl 4-[(5-fluoro-3-methyl-1-benzothiophen-2-yl)sulfonylamino]-3-methylsulfonylbenzoate (TOA EIYO INHIBITOR)
Method: X-RAY DIFFRACTION / Resolution: 2.17 Å

PDB-7h6c:
THE 1.60 A CRYSTAL STRUCTURE OF HUMAN CHYMASE IN COMPLEX WITH 1-(2-methoxyethyl)-3-(naphthalen-1-ylmethyl)indole-2-carboxylic acid
Method: X-RAY DIFFRACTION / Resolution: 1.61 Å

PDB-7h6d:
THE 1.64 A CRYSTAL STRUCTURE OF HUMAN CHYMASE IN COMPLEX WITH 1-[(8-methylnaphthalen-1-yl)methyl]indole-2-carboxylic acid
Method: X-RAY DIFFRACTION / Resolution: 1.64 Å

PDB-7h6e:
THE 2.0 A CRYSTAL STRUCTURE OF HUMAN CHYMASE IN COMPLEX WITH 5-fluoro-3-methyl-N-(2-methylsulfonyl-4-pyridin-4-ylphenyl)-1-benzothiophene-2-sulfonamide
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-7h6f:
THE 1.25 A CRYSTAL STRUCTURE OF HUMAN CHYMASE IN COMPLEX WITH 3-[2-(dimethylamino)-2-oxoethyl]-1-[(5-fluoro-1-benzothiophen-3-yl)methyl]indole-2-carboxylic acid (INDOLE 2-CARBOXYLIC ACID)
Method: X-RAY DIFFRACTION / Resolution: 1.25 Å

PDB-7h6g:
THE 1.21 A CRYSTAL STRUCTURE OF HUMAN CATHEPSIN G IN COMPLEX WITH N-[2-[6-fluoro-2-[(4-hydroxy-5-methyl-2-oxo-5-phenylfuran-3-yl)-phenylmethyl]-1H-indol-3-yl]ethyl]acetamide
Method: X-RAY DIFFRACTION / Resolution: 1.21 Å

PDB-7h6h:
THE 1.94 A CRYSTAL STRUCTURE OF HUMAN CATHEPSIN G IN COMPLEX WITH 1-[(7-fluoronaphthalen-1-yl)methyl]-3-[[methoxycarbonyl(methyl)amino]methyl]indole-2-carboxylic acid
Method: X-RAY DIFFRACTION / Resolution: 1.94 Å

PDB-7h6i:
THE 2.10 A CRYSTAL STRUCTURE OF HUMAN CHYMASE IN COMPLEX WITH 5-fluoro-3-(methanesulfonamidomethyl)-1-(naphthalen-1-ylmethyl)indole-2-carboxylic acid
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

Chemicals

ChemComp-ZN:
Unknown entry

PDB-1aot:
NMR STRUCTURE OF THE FYN SH2 DOMAIN COMPLEXED WITH A PHOSPHOTYROSYL PEPTIDE, MINIMIZED AVERAGE STRUCTURE

ChemComp-HOH:
WATER

PDB-1aox:
I DOMAIN FROM INTEGRIN ALPHA2-BETA1

ChemComp-DMS:
DIMETHYL SULFOXIDE / DMSO, precipitant*YM

PDB-1aoy:
N-TERMINAL DOMAIN OF ESCHERICHIA COLI ARGININE REPRESSOR NMR, 23 STRUCTURES

PDB-1aoz:
REFINED CRYSTAL STRUCTURE OF ASCORBATE OXIDASE AT 1.9 ANGSTROMS RESOLUTION

PDB-1ao0:
GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE (PRPP) AMIDOTRANSFERASE FROM B. SUBTILIS COMPLEXED WITH ADP AND GMP

PDB-1ao1:
INTERACTIONS OF DEGLYCOSYLATED COBALT(III)-PEPLEOMYCIN WITH DNA, NMR, MINIMIZED AVERAGE STRUCTURE

PDB-1ao2:
cobalt(III)-deglycopepleomycin determined by NMR studies

PDB-1ao3:
A3 DOMAIN OF VON WILLEBRAND FACTOR

ChemComp-CL:
Unknown entry

ChemComp-GOL:
GLYCEROL

PDB-1ao4:
COBALT(III)-PEPLOMYCIN COMPLEX DETERMINED BY NMR STUDIES

PDB-1aou:
NMR STRUCTURE OF THE FYN SH2 DOMAIN COMPLEXED WITH A PHOSPHOTYROSYL PEPTIDE, 22 STRUCTURES

PDB-1ao8:
DIHYDROFOLATE REDUCTASE COMPLEXED WITH METHOTREXATE, NMR, 21 STRUCTURES

PDB-1ao9:
INTRAMOLECULAR DNA DUPLEX CONTAINING A NON-NUCLEOTIDE LINKER (GAGAGA-X-TCTCCT), NMR, 12 STRUCTURES

PDB-1ao5:
MOUSE GLANDULAR KALLIKREIN-13 (PRORENIN CONVERTING ENZYME)

PDB-1aoo:
AG-SUBSTITUTED METALLOTHIONEIN FROM SACCHAROMYCES CEREVISIAE, NMR, MINIMIZED AVERAGE STRUCTURE

PDB-1aop:
SULFITE REDUCTASE STRUCTURE AT 1.6 ANGSTROM RESOLUTION

PDB-1aoq:
CYTOCHROME CD1 NITRITE REDUCTASE WITH SUBSTRATE AND PRODUCT BOUND

ChemComp-SO4:
SULFATE ION

PDB-1aos:
HUMAN ARGININOSUCCINATE LYASE

ChemComp-BTB:
2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL / pH buffer*YM

PDB-1ao6:
CRYSTAL STRUCTURE OF HUMAN SERUM ALBUMIN

PDB-1ao7:
COMPLEX BETWEEN HUMAN T-CELL RECEPTOR, VIRAL PEPTIDE (TAX), AND HLA-A 0201

Source
  • homo sapiens (human)
KeywordsHYDROLASE / HUMAN CHYMASE / SERINE PROTEINASE / HYDROLASE (SERINE PROTEASE) / CHYMASE / HUMAN CATHEPSIN G / COMPLEX (SERINE PROTEASE-INHIBITOR) complex

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