[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 10,168 items for (author: xia & r)

EMDB-65233:
Composite map of Type II-A CRISPR integrase prespacer catching complex, State II
Method: single particle / : Li ZX, Xiao YB

EMDB-73168:
Structure of the T6SS effector protein PdpC
Method: single particle / : Liu X, Zhou ZH

EMDB-70380:
Zebrafish Abcb4 in IF-narrow conformation (IF-Narrow)
Method: single particle / : Zhan J, Xia D

EMDB-70381:
Zebrafish Abcb4 in IF-Wide conformation (IF-Wide)
Method: single particle / : Zhan J, Xia D

EMDB-70382:
Zebrafish Abcb4 in IF-Medium conformation (IF-Medium)
Method: single particle / : Zhan J, Xia D

EMDB-70383:
Zebrafish Abcb4 in IF-narrow conformation in the presence of Tariquidar (TQR-IF-Narrow)
Method: single particle / : Zhan J, Xia D

EMDB-70384:
Zebrafish Abcb4 in IF-medium conformation in the presence of Tariquidar (TQR-IF-Medium)
Method: single particle / : Zhan J, Xia D

EMDB-70386:
Zebrafish Abcb4 in IF-Narrow conformation in the presence of Elacridar (ELA-IF-Narrow)
Method: single particle / : Zhan J, Xia D

EMDB-70387:
Zebrafish Abcb4 in IF-Medium conformation in the presence of Elacridar (ELA-IF-Medium)
Method: single particle / : Zhan J, Xia D

EMDB-70388:
Zebrafish Abcb4 in IF-Wide conformation in the presence of Elacridar (ELA-IF-Wide)
Method: single particle / : Zhan J, Xia D

EMDB-70389:
Zebrafish Abcb4 in IF-narrow conformation in the presence of Vincristine (VCR-IF-Narrow)
Method: single particle / : Zhan J, Xia D

EMDB-70390:
Zebrafish Abcb4 in IF-medium conformation in the presence of Vincristine (VCR-IF-Medium)
Method: single particle / : Zhan J, Xia D

EMDB-70391:
Zebrafish Abcb4 in IF-Wide conformation in the presence of Vincristine (VCR-IF-Wide)
Method: single particle / : Zhan J, Xia D

PDB-9ody:
Zebrafish Abcb4 in IF-narrow conformation (IF-Narrow)
Method: single particle / : Zhan J, Xia D

PDB-9odz:
Zebrafish Abcb4 in IF-Wide conformation (IF-Wide)
Method: single particle / : Zhan J, Xia D

PDB-9oe0:
Zebrafish Abcb4 in IF-Medium conformation (IF-Medium)
Method: single particle / : Zhan J, Xia D

PDB-9oe1:
Zebrafish Abcb4 in IF-narrow conformation in the presence of Tariquidar (TQR-IF-Narrow)
Method: single particle / : Zhan J, Xia D

PDB-9oe2:
Zebrafish Abcb4 in IF-medium conformation in the presence of Tariquidar (TQR-IF-Medium)
Method: single particle / : Zhan J, Xia D

PDB-9oe4:
Zebrafish Abcb4 in IF-Narrow conformation in the presence of Elacridar (ELA-IF-Narrow)
Method: single particle / : Zhan J, Xia D

PDB-9oe5:
Zebrafish Abcb4 in IF-Medium conformation in the presence of Elacridar (ELA-IF-Medium)
Method: single particle / : Zhan J, Xia D

PDB-9oe6:
Zebrafish Abcb4 in IF-Wide conformation in the presence of Elacridar (ELA-IF-Wide)
Method: single particle / : Zhan J, Xia D

PDB-9oe7:
Zebrafish Abcb4 in IF-narrow conformation in the presence of Vincristine (VCR-IF-Narrow)
Method: single particle / : Zhan J, Xia D

PDB-9oe8:
Zebrafish Abcb4 in IF-medium conformation in the presence of Vincristine (VCR-IF-Medium)
Method: single particle / : Zhan J, Xia D

PDB-9oe9:
Zebrafish Abcb4 in IF-Wide conformation in the presence of Vincristine (VCR-IF-Wide)
Method: single particle / : Zhan J, Xia D

EMDB-65508:
Cryo-EM structure of S1P2 in complex with heterotrimeric G protein
Method: single particle / : Wu B, Zhao Q, Tan Q

EMDB-65510:
cryoEM structure of S1P3 in complex with heterotrimeric G protein
Method: single particle / : Wu B, Zhao Q, Tan Q

PDB-9w0m:
Cryo-EM structure of S1P2 in complex with heterotrimeric G protein
Method: single particle / : Wu B, Zhao Q, Tan Q

PDB-9w0o:
cryoEM structure of S1P3 in complex with heterotrimeric G protein
Method: single particle / : Wu B, Zhao Q, Tan Q

EMDB-65964:
Structure of Klebsiella pneumoniae trypsin-HamAB bound with DNA, monomer
Method: single particle / : Huang PP, Chen MR, Xiao YB

PDB-9wh1:
Structure of Klebsiella pneumoniae trypsin-HamAB bound with DNA, monomer
Method: single particle / : Huang PP, Chen MR, Xiao YB

EMDB-65977:
Structure of Klebsiella pneumoniae trypsin-HamAB bound with DNA, trimer
Method: single particle / : Huang PP, Liu JX, Shen LB, Chen MR, Xiao YB

PDB-9whu:
Structure of Klebsiella pneumoniae trypsin-HamAB bound with DNA, trimer
Method: single particle / : Huang PP, Liu JX, Shen LB, Chen MR, Xiao YB

EMDB-65968:
Structure of Klebsiella pneumoniae trypsin-HamAB bound with DNA, dimer
Method: single particle / : Huang PP, Liu JX, Shen LB, Chen MR, Xiao YB

PDB-9whk:
Structure of Klebsiella pneumoniae trypsin-HamAB bound with DNA, dimer
Method: single particle / : Huang PP, Liu JX, Shen LB, Chen MR, Xiao YB

EMDB-67871:
DRT4 homohexamer
Method: single particle / : Xiao J, Wang L

EMDB-67946:
DRT4 homohexamer with dGTPaS
Method: single particle / : Xiao J, Wang L

EMDB-67947:
DRT4 homohexamer with dATP
Method: single particle / : Xiao J, Wang L

EMDB-67950:
DRT4 homohexamer with dATP, dGTPaS, SSB, RNA
Method: single particle / : Xiao J, Wang L

EMDB-68056:
DRT4 homohexamer with dATP, SSB
Method: single particle / : Xiao J, Wang L

EMDB-69681:
DRT4 homohexamer with dGTP
Method: single particle / : Wang L, Li J

EMDB-69682:
DRT4 homohexamer with dGTP, GMP
Method: single particle / : Wang L, Li J

EMDB-69683:
DRT4 homohexamer with dGTP, RNA
Method: single particle / : Wang L, Li J

EMDB-69684:
DRT4 homohexamer with dGTP, ssRNA (local refinement)
Method: single particle / : Wang L, Li J

PDB-21ou:
DRT4 homohexamer
Method: single particle / : Xiao J, Wang L

PDB-21ro:
DRT4 homohexamer with dGTPaS
Method: single particle / : Xiao J, Wang L

PDB-21rp:
DRT4 homohexamer with dATP
Method: single particle / : Xiao J, Wang L

PDB-21rs:
DRT4 homohexamer with dATP, dGTPaS, SSB, RNA
Method: single particle / : Xiao J, Wang L

PDB-21wo:
DRT4 homohexamer with dATP, SSB
Method: single particle / : Xiao J, Wang L

PDB-24na:
DRT4 homohexamer with dGTP
Method: single particle / : Wang L, Li J

PDB-24nb:
DRT4 homohexamer with dGTP, GMP
Method: single particle / : Wang L, Li J

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more