[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 76 items for (author: wieland & f)

EMDB-54522:
C. elegans in situ Gap Junction class 1
Method: subtomogram averaging / : Rosenkranz N, Gottschalk A

EMDB-54525:
in situ Gap Junction C. elegans Class 2
Method: subtomogram averaging / : Rosenkranz N, Gottschalk A

EMDB-54526:
in situ C. elegans capped gap junction
Method: subtomogram averaging / : Rosenkranz N, Gottschalk A

EMDB-55045:
Capped GJ with additional cytosolic Density
Method: subtomogram averaging / : Rosenkranz N, Gottschalk A

EMDB-62397:
Strigolactone-induced ASK1-MAX2-HTL7-SMAX1 complex (Class 1) with covalently bound D-ring
Method: single particle / : Vancea AI, Huntington B, Savva CG, Arold ST

EMDB-62401:
Strigolactone-induced ASK1-MAX2-HTL7-SMAX1 complex (Class 2) with covalently bound D-ring
Method: single particle / : Vancea AI, Huntington B, Savva CG, Arold ST

EMDB-62407:
Strigolactone-induced ASK1-MAX2-HTL7-SMAX1 complex (Class 4) with covalently bound D-ring
Method: single particle / : Vancea AI, Huntington B, Savva CG, Arold ST

EMDB-62408:
Striga MAX2-ASK1 complex
Method: single particle / : Vancea AI, Huntington B, Savva CG, Arold ST

EMDB-62414:
Striga MAX2-ASK1 2:2 dimer
Method: single particle / : Vancea AI, Huntington B, Savva CG, Arold ST

EMDB-62415:
Rice D3-ASK1 complex in presence of ShHTL7 with GR24
Method: single particle / : Vancea AI, Huntington B, Savva CG, Arold ST

EMDB-62417:
Strigolactone-induced ASK1-MAX2-HTL7-SMAX1 complex (Class 3) with covalently bound D-ring
Method: single particle / : Vancea AI, Huntington B, Savva CG, Arold ST

PDB-9kkx:
Strigolactone-induced ASK1-MAX2-HTL7-SMAX1 complex (Class 1) with covalently bound D-ring
Method: single particle / : Vancea AI, Huntington B, Savva CG, Arold ST

PDB-9kld:
Strigolactone-induced ASK1-MAX2-HTL7-SMAX1 complex (Class 2) with covalently bound D-ring
Method: single particle / : Vancea AI, Huntington B, Savva CG, Arold ST

PDB-9klk:
Strigolactone-induced ASK1-MAX2-HTL7-SMAX1 complex (Class 4) with covalently bound D-ring
Method: single particle / : Vancea AI, Huntington B, Savva CG, Arold ST

PDB-9kll:
Striga MAX2-ASK1 complex
Method: single particle / : Vancea AI, Huntington B, Savva CG, Arold ST

PDB-9klv:
Strigolactone-induced ASK1-MAX2-HTL7-SMAX1 complex (Class 3) with covalently bound D-ring
Method: single particle / : Vancea AI, Huntington B, Savva CG, Arold ST

EMDB-51116:
Cryo-EM structure of Acetyl-coenzyme A synthetase (AcsA) dimer
Method: single particle / : Zheng LJ, Du Y, Bange G

EMDB-51121:
Cryo-EM structure of Acetyl-coenzyme A synthetase (AcsA) dimer
Method: single particle / : Zheng LJ, Du Y, Bange G

PDB-9g79:
Cryo-EM structure of Acetyl-coenzyme A synthetase (AcsA) dimer
Method: single particle / : Zheng LJ, Du Y, Bange G

PDB-9g7f:
Cryo-EM structure of Acetyl-coenzyme A synthetase (AcsA) dimer
Method: single particle / : Zheng LJ, Du Y, Bange G

EMDB-52069:
The molecular architecture of the murine kidney slit diaphragm revealed by cryo-electron tomography
Method: subtomogram averaging / : Frangakis MP, Frangakis AS, Birtasu AN

EMDB-51408:
Mycoplasma pneumoniae protein P116 ectodomain in the empty conformation
Method: single particle / : Manger S

EMDB-51409:
Mycoplasma pneumoniae protein P116 ectodomain in the full conformation
Method: single particle / : Manger S

EMDB-51410:
Mycoplasma pneumoniae protein P116 truncated ectodomain (aa 246-818) dimer in the empty conformation
Method: single particle / : Manger S

EMDB-51411:
Mycoplasma pneumoniae protein P116 truncated ectodomain (aa 246-818) monomer in the empty conformation
Method: single particle / : Manger S

EMDB-51412:
Mycoplasma pneumoniae protein P116 truncated ectodomain (aa 246-818) monomer in the empty conformation
Method: single particle / : Manger S

EMDB-50314:
P116 (amino acids 246-818) dimer in the full state
Method: single particle / : Mager S

PDB-9fch:
P116 dimer in the full state (PDB structure of the full-length ectodomain truncated to amino acids 246-818)
Method: single particle / : Mager S

EMDB-17994:
Cryo-EM structure of a full-length HACE1 dimer
Method: single particle / : Duering J, Wolter M, Dienemann C, Lorenz S

EMDB-18056:
HACE1 in complex with RAC1 Q61L
Method: single particle / : Wolter M, Duering J, Dienemann C, Lorenz S

PDB-8pwl:
Cryo-EM structure of a full-length HACE1 dimer
Method: single particle / : Duering J, Wolter M, Dienemann C, Lorenz S

PDB-8q0n:
HACE1 in complex with RAC1 Q61L
Method: single particle / : Wolter M, Duering J, Dienemann C, Lorenz S

EMDB-18476:
P116 (ectodomain AA 30-957) from Mycoplasma pneumoniae filled with a hydrophobic peptide.
Method: single particle / : Manger S

EMDB-15052:
CryoEM structure of DHS-eIF5A1 complex
Method: single particle / : Wator E, Wilk P, Biela AP, Rawski M, Grudnik P

PDB-8a0e:
CryoEM structure of DHS-eIF5A1 complex
Method: single particle / : Wator E, Wilk P, Biela AP, Rawski M, Grudnik P

EMDB-26486:
70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B
Method: single particle / : Rundlet EJ, Wieland M, Holm M, Koller TO, Blanchard SC, Wilson DN

PDB-7ug7:
70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B
Method: single particle / : Rundlet EJ, Wieland M, Holm M, Koller TO, Blanchard SC, Wilson DN

EMDB-13058:
Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin B
Method: single particle / : Wieland M, Koller TO

PDB-7otc:
Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin B
Method: single particle / : Wieland M, Koller TO, Wilson DN

EMDB-12734:
Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound
Method: single particle / : Kratzat H, Czech L

EMDB-12735:
Cryo-EM map of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with GMPPNP-SRP bound
Method: single particle / : Kratzat H, Berninghausen O, Beckmann R

EMDB-13839:
Cryo-EM structure of an Escherichia coli TnaC-stalled FtsQ ribosome-nascent chain complex with GMPPNP-SRP bound
Method: single particle / : Esser HF, Kratzat H, Musial J, Berninghausen O, Beckmann R

EMDB-13840:
Cryo-EM structure of an Escherichia coli TnaC-stalled FtsQ ribosome-nascent chain complex with (p)ppGpp-SRP bound
Method: single particle / : Esser HF, Kratzat H, Musial J, Berninghausen O, Beckmann R

PDB-7o5b:
Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound
Method: single particle / : Kratzat H, Czech L, Berninghausen O, Bange G, Beckmann R

EMDB-11059:
ATP-dependent partner switch links flagellar C-ring assembly with gene expression
Method: subtomogram averaging / : Blagotinsek V, Schwan M, Steinchen W, Mrusek D, Hook J, Rossmann FM, Freibert SA, Kressler D, Beeby M, Thormann KM, Bange G

EMDB-11060:
Flagellar motor of Shewanella putrefaciens in situ, flhG deletion
Method: subtomogram averaging / : Blagotinsek V, Schwan M, Steinchen W, Mrusek D, Hook J, Rossmann FM, Freibert SA, Kressler D, Beeby M, Thormann KM, Bange G

EMDB-0270:
Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
Method: single particle / : Wilson DN, Abdelshahid M

PDB-6htq:
Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
Method: single particle / : Wilson DN, Abdelshahid M

EMDB-3720:
The structure of the COPI coat leaf
Method: subtomogram averaging / : Dodonova SO, Aderhold P

EMDB-3721:
The structure of the COPI coat leaf in complex with the ArfGAP2 uncoating factor
Method: subtomogram averaging / : Dodonova SO, Aderhold P

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more