[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 4,693 items for (author: shu & b)

EMDB-72725:
Cryo-EM structure of ternary complex BCL6-CRBN-DDB1 with BMS-986458 (local refined), a potent and selective BCL6 ligand directed degrader (LDD)
Method: single particle / : Zhu J, Fang W, Pagarigan B

PDB-9ya9:
Cryo-EM structure of ternary complex BCL6-CRBN-DDB1 with BMS-986458 (local refined), a potent and selective BCL6 ligand directed degrader (LDD)
Method: single particle / : Zhu J, Fang W, Pagarigan B

EMDB-70592:
Membrane-associated human mitoribosome in complex with TACO1
Method: single particle / : Wang S, Xiong Y, Zhang Y

EMDB-70620:
In situ mitoribosome focused on the mtSSU
Method: single particle / : Wang S, Xiong Y, Zhang Y

EMDB-70621:
Consensus map of the mitoribosome complexed with TACO1
Method: single particle / : Wang S, Xiong Y, Zhang Y

EMDB-71797:
In Situ Structure of the Human Mitochondrial Large Subunit 39S in Complex with TACO1
Method: single particle / : Wang S, Xiong Y, Zhang Y

EMDB-71802:
In Situ Structure of the Human Mitoribosome Large Subunit 39S in Complex with EF-Tu
Method: single particle / : Wang S, Xiong Y, Zhang Y

EMDB-71809:
In situ structure of the human mitoribosome in the P state from TACO1-knockout cells
Method: single particle / : Wang S, Xiong Y, Zhang Y

EMDB-71811:
In situ structure of human mitoribosome in the A/T-P state from TACO1-knockout cells
Method: single particle / : Wang S, Xiong Y, Zhang Y

EMDB-71815:
In situ structure of the human mitoribosome in the A-P state from TACO1-knockout cells
Method: single particle / : Wang S, Xiong Y, Zhang Y

EMDB-71818:
In situ structure of the human mitoribosome in the A/P-P/E state from TACO1-knockout cells
Method: single particle / : Wang S, Xiong Y, Zhang Y

EMDB-71825:
In situ structure of the human mitoribosome in the A/T-P-E state from TACO1-knockout cells
Method: single particle / : Wang S, Xiong Y, Zhang Y

EMDB-71828:
In situ structure of the human mitoribosome in the A-P-E state from TACO1-knockout cells
Method: single particle / : Wang S, Xiong Y, Zhang Y

EMDB-71829:
In situ structure of the human mitoribosome in the A/P-P/E state
Method: single particle / : Shuhui W, Yong X

PDB-9olf:
Membrane-associated human mitoribosome in complex with TACO1
Method: single particle / : Wang S, Xiong Y, Zhang Y

PDB-9pr4:
In Situ Structure of the Human Mitochondrial Large Subunit 39S in Complex with TACO1
Method: single particle / : Wang S, Xiong Y, Zhang Y

PDB-9pra:
In Situ Structure of the Human Mitoribosome Large Subunit 39S in Complex with EF-Tu
Method: single particle / : Wang S, Xiong Y, Zhang Y

PDB-9prd:
In situ structure of the human mitoribosome in the P state from TACO1-knockout cells
Method: single particle / : Wang S, Xiong Y, Zhang Y

PDB-9prq:
In situ structure of human mitoribosome in the A/T-P state from TACO1-knockout cells
Method: single particle / : Wang S, Xiong Y, Zhang Y

PDB-9prx:
In situ structure of the human mitoribosome in the A-P state from TACO1-knockout cells
Method: single particle / : Wang S, Xiong Y, Zhang Y

PDB-9ps0:
In situ structure of the human mitoribosome in the A/P-P/E state from TACO1-knockout cells
Method: single particle / : Wang S, Xiong Y, Zhang Y

PDB-9ps7:
In situ structure of the human mitoribosome in the A/T-P-E state from TACO1-knockout cells
Method: single particle / : Wang S, Xiong Y, Zhang Y

PDB-9psi:
In situ structure of the human mitoribosome in the A-P-E state from TACO1-knockout cells
Method: single particle / : Wang S, Xiong Y, Zhang Y

PDB-9psm:
In situ structure of the human mitoribosome in the A/P-P/E state
Method: single particle / : Shuhui W, Yong X

EMDB-70129:
KICSTOR-GATOR1 complex (SZT2 [1300-2400]) focused refinement
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70130:
KICSTOR-GATOR1 complex (SZT2 [2000-3200], KPTN, ITFG2) focused refinement
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70131:
KICSTOR-GATOR1 complex (SZT2 [2800-3432], C12orf66) focused refinement
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70132:
KICSTOR-GATOR1 (SZT2 [1-2000], NPRL3) focused refinement
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70134:
KICSTOR-GATOR1 (DEPDC5, NPRL2, NPRL3) focused refinement
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70135:
The KICSTOR-GATOR1 complex
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70137:
KICSTOR-GATOR1 dimer supercomplex (DEPDC5) focused refinement
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70138:
KICSTOR-GATOR1 dimer supercomplex (SZT2, NPRL2, NPRL3) focused refinement
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

PDB-9o5a:
The KICSTOR-GATOR1 complex
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-66412:
mouse PDCD5-TRiC-ADP complex
Method: single particle / : Song QQ, Cong Y

EMDB-70395:
Ab1999 in complex with HIV-1 Env RC1
Method: single particle / : Lin ZJ, Cui J, Du J, Relano-Rodriguez I, Escolano A, Pallesen J

PDB-9oed:
Ab1999 in complex with HIV-1 Env RC1
Method: single particle / : Lin ZJ, Cui J, Du J, Relano-Rodriguez I, Escolano A, Pallesen J

EMDB-67602:
Cryo-EM structure of the apomorphine bound ADGRG6-Gs complex
Method: single particle / : Han S, Wu B, Zhao Q

PDB-21du:
Cryo-EM structure of the apomorphine bound ADGRG6-Gs complex
Method: single particle / : Han S, Wu B, Zhao Q

EMDB-53030:
CRYO-EM STRUCTURE OF THE YEAST RESPIRATORY COMPLEX II WITH THE INHIBITOR BIXAFEN
Method: single particle / : Pinotsis N, Marechal A, Berry EA, Shu C

PDB-9qdm:
CRYO-EM STRUCTURE OF THE YEAST RESPIRATORY COMPLEX II WITH THE INHIBITOR BIXAFEN
Method: single particle / : Pinotsis N, Marechal A, Berry EA, Shu C

EMDB-70116:
The KICSTOR-GATOR1 complex (consensus)
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70117:
KICSTOR-GATOR1 complex (SZT2 [1-1330], NPRL2, NPRL3, DEPDC5) focused refinement.
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70136:
KICSTOR-GATOR1 dimer supercomplex (consensus)
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-63995:
The structure of mCAT1 in complex with its substrate ornithine and the RBD of FrMLV.
Method: single particle / : Xia LY, Yang Y, Chen XM

PDB-9uat:
The structure of mCAT1 in complex with its substrate ornithine and the RBD of FrMLV.
Method: single particle / : Xia LY, Yang Y, Chen XM

EMDB-70231:
Ab1983 in complex with HIV-1 Env variant WIN332
Method: single particle / : Lin ZJ, Cui J, Du J, Relano-Rodriguez I, Escolano A, Pallesen J

PDB-9o8m:
Ab1983 in complex with HIV-1 Env variant WIN332
Method: single particle / : Lin ZJ, Cui J, Du J, Relano-Rodriguez I, Escolano A, Pallesen J

EMDB-49892:
Cryo-EM structure of DDB1dB:CRBN:mezigdomide:SALL4(392-449)
Method: single particle / : Park J, Hunkeler M, Roy Burman SS, Fishcer ES

EMDB-49893:
Cryo-EM structure of DDB1dB:CRBN:mezigdomide:SALL4(392-449;G416A)
Method: single particle / : Park J, Hunkeler M, Roy Burman SS, Fischer ES

PDB-9nws:
Cryo-EM structure of DDB1dB:CRBN:mezigdomide:SALL4(392-449)
Method: single particle / : Park J, Hunkeler M, Roy Burman SS, Fishcer ES

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more