[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 236 items for (author: sharon & i)

EMDB-52330:
Cryo-EM structure of DDB1dB-CRBN-MRT-0031619, conformation 1
Method: single particle / : Langousis G, Hunkeler M, Chami M, Quan C, Townson S, Bonenfant D

EMDB-52331:
Cryo-EM structure of DDB1dB-CRBN-MRT-0031619, conformation 2
Method: single particle / : Langousis G, Hunkeler M, Chami M, Quan C, Townson S, Bonenfant D

PDB-9hpi:
Cryo-EM structure of DDB1dB-CRBN-MRT-0031619, conformation 1
Method: single particle / : Langousis G, Hunkeler M, Chami M, Quan C, Townson S, Bonenfant D

PDB-9hpj:
Cryo-EM structure of DDB1dB-CRBN-MRT-0031619, conformation 2
Method: single particle / : Langousis G, Hunkeler M, Chami M, Quan C, Townson S, Bonenfant D

EMDB-70458:
Cryo-EM structure of human full-length XPO1 (unliganded)
Method: single particle / : Wing CE, Fung HYJ, Chook YM

EMDB-70459:
Cryo-EM structure of human full-length XPO1 conjugated with selinexor
Method: single particle / : Wing CE, Fung HYJ, Chook YM

EMDB-70460:
Cryo-EM structure of human exportin-1 conjugated with selinexor and bound to yeast RAN-GTP and human ASB8-ELOB/C
Method: single particle / : Wing CE, Fung HYJ, Chook YM

EMDB-70461:
Cryo-EM structure of human exportin-1 conjugated with KPT-185 and bound to human ASB8-ELOB/C
Method: single particle / : Wing CE, Fung HYJ, Chook YM

EMDB-70462:
Cryo-EM structure of human exportin-1 conjugated with selinexor and bound to human ASB8(R197A)-ELOB/C
Method: single particle / : Wing CE, Fung HYJ, Chook YM

EMDB-70463:
Cryo-EM structure of human exportin-1 conjugated with KPT-127 and bound to human ASB8-ELOB/C
Method: single particle / : Wing CE, Fung HYJ, Chook YM

EMDB-70464:
Cryo-EM structure of human exportin-1 conjugated with KPT-UTSW1 and bound to human ASB8-ELOB/C
Method: single particle / : Wing CE, Fung HYJ, Chook YM

PDB-9og9:
Cryo-EM structure of human full-length XPO1 (unliganded)
Method: single particle / : Wing CE, Fung HYJ, Chook YM

PDB-9oga:
Cryo-EM structure of human full-length XPO1 conjugated with selinexor
Method: single particle / : Wing CE, Fung HYJ, Chook YM

PDB-9ogb:
Cryo-EM structure of human exportin-1 conjugated with selinexor and bound to yeast RAN-GTP and human ASB8-ELOB/C
Method: single particle / : Wing CE, Fung HYJ, Chook YM

PDB-9ogc:
Cryo-EM structure of human exportin-1 conjugated with KPT-185 and bound to human ASB8-ELOB/C
Method: single particle / : Wing CE, Fung HYJ, Chook YM

PDB-9ogd:
Cryo-EM structure of human exportin-1 conjugated with selinexor and bound to human ASB8(R197A)-ELOB/C
Method: single particle / : Wing CE, Fung HYJ, Chook YM

PDB-9oge:
Cryo-EM structure of human exportin-1 conjugated with KPT-127 and bound to human ASB8-ELOB/C
Method: single particle / : Wing CE, Fung HYJ, Chook YM

PDB-9ogf:
Cryo-EM structure of human exportin-1 conjugated with KPT-UTSW1 and bound to human ASB8-ELOB/C
Method: single particle / : Wing CE, Fung HYJ, Chook YM

EMDB-49708:
cryo-EM structure of broad betacoronavirus binding antibody 1871 in complex with OC43 S2 subunit
Method: single particle / : Muthuraman K, Jackman MJ, Julien JP

PDB-9nqz:
cryo-EM structure of broad betacoronavirus binding antibody 1871 in complex with OC43 S2 subunit
Method: single particle / : Muthuraman K, Jackman MJ, Julien JP

EMDB-70340:
FH_302_07 Fab in complex with BG505 MD39.3 SOSIP (negative stain)
Method: single particle / : Lee WH, Ozorowski G, Ward AB

EMDB-70341:
FH_302_14 Fab in complex with BG505 MD39.3 SOSIP (negative stain)
Method: single particle / : Lee WH, Ozorowski G, Ward AB

EMDB-70342:
FH_302_23 Fab in complex with BG505 MD39.3 SOSIP (negative stain)
Method: single particle / : Lee WH, Ozorowski G, Ward AB

EMDB-70343:
BG505 MD39.3-CC5 SOSIP in complex with V1V3 epitope polyclonal Fabs isolated from HVTN302 human trial after dose 3 of mRNA-gp151-CD4KO immunization
Method: single particle / : Lee WH, Ozorowski G, Ward AB

EMDB-70344:
BG505 MD39.3-CC5 SOSIP in complex with gp41-base epitope polyclonal Fabs isolated from HVTN302 human trial after dose 3 of mRNA-gp151-CD4KO immunization
Method: single particle / : Lee WH, Ozorowski G, Ward AB

EMDB-70345:
BG505 MD39.3-CC5 SOSIP in complex with C3V5 epitope polyclonal Fabs isolated from HVTN302 human trial after dose 3 of mRNA-gp151-CD4KO immunization
Method: single particle / : Lee WH, Ozorowski G, Ward AB

EMDB-48575:
G002-293-0536 Fab in complex with 001428_T278M_L14 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-48591:
G002-480-0546 Fab in complex with V703-0537_T278M_L14 SOSIP and BG18 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9msd:
G002-293-0536 Fab in complex with 001428_T278M_L14 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9msy:
G002-480-0546 Fab in complex with V703-0537_T278M_L14 SOSIP and BG18 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-53197:
Dual-axis CSTET tomogram of mitochondria from MFF-/- U2-OS cells under fission-inducing conditions
Method: electron tomography / : Kirchweger P, Wolf SG, Elbaum M

EMDB-46892:
Structure of SARS-CoV-2 spike in complex with antibody Fab COVIC-154
Method: single particle / : Yu X, Saphire EO

PDB-9dhy:
Structure of SARS-CoV-2 spike in complex with antibody Fab COVIC-154
Method: single particle / : Yu X, Saphire EO

EMDB-50258:
CryoEM structure of recombinant Trypanosoma cruzi apo proteasome 20S subunit
Method: single particle / : Rowland P

EMDB-50260:
CryoEM structure of native Trypanosoma cruzi apo proteasome 20S subunit
Method: single particle / : Rowland P

PDB-9f9p:
CryoEM structure of recombinant Trypanosoma cruzi apo proteasome 20S subunit
Method: single particle / : Rowland P

PDB-9f9t:
CryoEM structure of native Trypanosoma cruzi apo proteasome 20S subunit
Method: single particle / : Rowland P

EMDB-45833:
KZ52 Fab fragment bound to Ebola GP, subtomogram average from a tight mask
Method: subtomogram averaging / : Ke Z, Saphire EO, Briggs JAG

EMDB-45834:
KZ52 Fab fragment bound to Ebola GP, subtomogram average from a cylinder mask
Method: subtomogram averaging / : Ke Z, Saphire EO, Briggs JAG

EMDB-45835:
3A6 Fab fragment bound to Ebola GP, subtomogram average from a cylinder mask
Method: subtomogram averaging / : Ke Z, Saphire EO, Briggs JAG

EMDB-45836:
3A6 and KZ52 Fab fragments bound to Ebola GP, subtomogram average from a tight mask
Method: subtomogram averaging / : Ke Z, Saphire EO, Briggs JAG

EMDB-45837:
3A6 and KZ52 Fab fragments bound to Ebola GP, subtomogram average from a cylinder mask
Method: subtomogram averaging / : Ke Z, Saphire EO, Briggs JAG

EMDB-51759:
Dual-Axis cryo-STEM tomogram of a Mitochondrion from MFF-/- MEFs
Method: electron tomography / : Kirchweger P, Wolf SG, Elbaum M, Fass D

EMDB-51763:
CSTET Tomogram of a Mitochondrion from MFF-/- MEFs under fission inducing conditions
Method: electron tomography / : Kirchweger P, Wolf SG, Elbaum M, Fass D

EMDB-51764:
Dual-axis CSTET tomogram of mitochondria from a MFF-/- MEF cell, under fission-inducing conditions
Method: electron tomography / : Kirchweger P, Wolf SG, Elbaum M, Fass D

EMDB-42049:
Cryo-EM Structure of FBOX22-BACH1BTB
Method: single particle / : Shi H, Cao S, Zheng N

EMDB-42051:
Cryo-EM Structure of SCF-FBOX22-BACH1BTB
Method: single particle / : Shi H, Cao S, Zheng N

EMDB-42064:
Structure of BACH1 BTB domain-bound FBXL17 ubiquitin ligase
Method: single particle / : Shi H, Cao S, Zheng N

EMDB-42102:
Structure of SCF-FBXL17-BACH1BTB E3 ligase complex
Method: single particle / : Shi H, Cao S

EMDB-42105:
Cryo-EM structure of dimeric SCF-FBXL17-BACH1BTB E3 ligase complex close conformation
Method: single particle / : Shi H, Cao S, Zheng N

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more