[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 38 items for (author: ravelli & r)

EMDB-18594:
Cryo-EM structure of E. coli cytochrome bo3 quinol oxidase assembled in peptidiscs

PDB-8qqk:
Cryo-EM structure of E. coli cytochrome bo3 quinol oxidase assembled in peptidiscs

EMDB-18010:
Charging of vitreous samples in cryogenic electron microscopy mitigated by graphene - BfrB - Dataset 4 - Quantifoil 300 mesh R1.2/1.3 with Graphene - Large Beam

EMDB-18028:
Charging of vitreous samples in cryogenic electron microscopy mitigated by graphene - BfrB - Dataset 2 - Quantifoil 300 mesh R1.2/1.3 with Graphene - Small Beam

EMDB-18029:
Charging of vitreous samples in cryogenic electron microscopy mitigated by graphene - BfrB - Dataset 1 - Quantifoil 300 mesh R1.2/1.3 - Small Beam

EMDB-18030:
Charging of vitreous samples in cryogenic electron microscopy mitigated by graphene - BfrB - Dataset 3 - Quantifoil 300 mesh R1.2/1.3 - Large Beam

EMDB-27121:
CryoEM structure of human orphan GPCR GPR179 in complex with extracellular matrix protein pikachurin

PDB-8d1b:
CryoEM structure of human orphan GPCR GPR179 in complex with extracellular matrix protein pikachurin

EMDB-15389:
3 A CRYO-EM STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS FERRITIN FROM TIMEPIX3 detector

PDB-8aey:
3 A CRYO-EM STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS FERRITIN FROM TIMEPIX3 detector

EMDB-13164:
Cryo-EM structure of encapsulin from Mycobacterium tuberculosis

PDB-7p1t:
Cryo-EM structure of encapsulin from Mycobacterium tuberculosis

EMDB-13153:
2.43 A Mycobacterium marinum EspB.

EMDB-13154:
2.29 A Mycobacterium tuberculosis EspB.

PDB-7p0z:
2.43 A Mycobacterium marinum EspB.

PDB-7p13:
2.29 A Mycobacterium tuberculosis EspB.

EMDB-12738:
2.12 A cryo-EM structure of Mycobacterium tuberculosis Ferritin

PDB-7o6e:
2.12 A cryo-EM structure of Mycobacterium tuberculosis Ferritin

EMDB-11905:
In situ subtomogram averaging structure of the type III secretion system of yersinia enterocolitica - sorting platform

EMDB-11906:
In situ subtomogram averaging structure of the type III secretion system of yersinia enterocolitica - basal body

EMDB-11907:
In situ subtomogram averaging structure of the type III secretion system of yersinia enterocolitica - needle tip

EMDB-10792:
Hybrid structure of the SPP1 tail tube by solid-state NMR and cryo EM - Final EM Refinement

PDB-6yeg:
Hybrid structure of the SPP1 tail tube by solid-state NMR and cryo EM - Final EM Refinement

PDB-6yq5:
Hybrid structure of the SPP1 tail tube by solid-state NMR and cryo EM - NMR Ensemble

EMDB-10669:
Amyloid fibril structure of islet amyloid polypeptide

EMDB-10670:
Amyloid fibril structure of islet amyloid polypeptide - polymorph 2

EMDB-10671:
Amyloid fibril structure of islet amyloid polypeptide - polymorph 3

PDB-6y1a:
Amyloid fibril structure of islet amyloid polypeptide

EMDB-0790:
GluK3 receptor complex with kainate

EMDB-0839:
GluK3 receptor complex with UBP301

PDB-6kzm:
GluK3 receptor complex with kainate

PDB-6l6f:
GluK3 receptor complex with UBP301

EMDB-4727:
Cryo-EM Structure of the PI3-Kinase SH3 Domain Amyloid Fibril

PDB-6r4r:
Cryo-EM Structure of the PI3-Kinase SH3 Domain Amyloid Fibril

PDB-5m3l:
Single-particle cryo-EM using alignment by classification (ABC): the structure of Lumbricus terrestris hemoglobin

EMDB-3851:
Near-atomic resolution fibril structure of complete amyloid-beta(1-42) by cryo-EM

PDB-5oqv:
Near-atomic resolution fibril structure of complete amyloid-beta(1-42) by cryo-EM

EMDB-3434:
Single-particle cryo-EM using alignment by classification (ABC):Lumbricus terrestris hemoglobin at near-atomic resolution

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more