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Showing all 41 items for (author: prokhorov & ns)

EMDB-73228:
Local refinement of Fab-14/SARS-CoV-2 D614G spike complex, Mode I
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73231:
Cryo-EM map of D614G spike, 1-up-RBD
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73244:
SARS-CoV-2 D614G spike, 3-RBD-downn
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73245:
Local refinement of Fab-14/SARS-CoV-2 D614G spike complex, Mode I, Subgroup I conformation
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73247:
Fab-14/SARS-CoV-2 D614G spike complex, Mode V conformation
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73260:
Fab-14/SARS-CoV-2 D614G spike complex, Mode I conformation
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73263:
Fab-14/SARS-CoV-2 D614G spike complex, Mode II, subgroup I conformation
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73265:
Fab-14/SARS-CoV-2 D614G spike complex, Mode II, subgroup II conformation
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73267:
Fab-14/SARS-CoV-2 D614G spike complex, Mode II, subgroup III conformation
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73270:
Fab-14/SARS-CoV-2 Omicron BA.1 spike complex
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73271:
SARS-CoV-2 Omicron BA.1 spike, 3-RBD-down
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73273:
SARS-CoV-2 Omicron BA.1 spike, 1-RBD-up
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73290:
Fab-14/SARS-CoV-2 D614G spike complex, Mode III conformation
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73291:
Unbound SARS-CoV-2 D614G spike
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73292:
Fab-14/SARS-CoV-2 D614G spike complex, Mode IV, subgroup II conformation
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73306:
Fab-14/SARS-CoV-2 D614G spike complex, Mode IV, subgroup II conformation
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-43792:
phi29 empty capsid lacking pentons and portal
Method: single particle / : Woodson ME, Morais MC, Seth S, Zhang W, Jardine PJ

EMDB-43793:
phi29 empty capsid maturation intermediate with wild-type pRNA
Method: single particle / : Woodson ME, Morais MC, Zhang W, Jardine PJ

EMDB-28820:
phi-29 prohead MCP gp8 penton maturation intermediate, with associated scaffold gp7 tetramer
Method: single particle / : Woodson ME, Morais MC, Jardine PJ, Zhang W, Prokhorov NS

EMDB-28821:
bacteriophage phi-29 MCP gp-8 penton in intermediate maturation state, with associated scaffold gp7 dimer
Method: single particle / : Woodson ME, Morais MC, Prokhorov NS, Zhang W, Jardine PJ

EMDB-28822:
Phi-29 scaffolding protein bound to intermediate-state MCP
Method: single particle / : Woodson ME, Morais MC, Jardine PJ, Scott SD

EMDB-28823:
Phi-29 partially-expanded fiberless prohead
Method: single particle / : Woodson ME, Morais MC, Scott SD, Choi KH, Jardine PJ, Zhang W

EMDB-28824:
Phi-29 expanded, DNA-packaged fiberless prohead
Method: single particle / : Woodson ME, Morais MC, Jardine PJ, Zhang W

EMDB-25675:
Structure of bacteriophage lambda tube protein V in C3
Method: single particle / : Prokhorov NS, Yang Q

EMDB-25611:
Structure of bacteriophage lambda tube protein V in C6
Method: single particle / : Prokhorov NS, Yang Q

EMDB-25443:
CryoEM map of the manually-picked stalled contraction intermediate state of bacteriophage A511.
Method: single particle / : Fraser A, Leiman PG

EMDB-25444:
CryoEM map of the CNN-picked stalled contraction intermediate state of bacteriophage A511.
Method: single particle / : Fraser A, Leiman PG

EMDB-25182:
Procapsid of bacteriophage lambda
Method: single particle / : Maruthi K, Prokhorov NS, Morais MC

EMDB-20526:
CryoEM Structure of Pyocin R2 - precontracted - trunk
Method: helical / : Ge P, Avaylon J

EMDB-20643:
CryoEM Structure of Pyocin R2 - precontracted - baseplate
Method: single particle / : Ge P, Avaylon J

EMDB-20644:
CryoEM Structure of Pyocin R2 - precontracted - collar
Method: single particle / : Ge P, Avaylon J

EMDB-20646:
CryoEM Structure of Pyocin R2 - precontracted - hub
Method: single particle / : Ge P, Avaylon J

EMDB-20647:
CryoEM Structure of Pyocin R2 - postcontracted - collar
Method: single particle / : Ge P, Avaylon J

EMDB-20648:
CryoEM Structure of Pyocin R2 - postcontracted - baseplate
Method: single particle / : Ge P, Avaylon J

EMDB-3374:
Cryo-electron microscopy structure of the hexagonal pre-attachment T4 baseplate-tail tube complex
Method: single particle / : Taylor NMI, Guerrero-Ferreira RC, Goldie KN, Stahlberg H, Leiman PG

EMDB-3392:
Cryo-electron microscopy structure of the hexagonal pre-attachment T4 baseplate-tail tube complex: locally masked refinement of the inner baseplate
Method: single particle / : Taylor NMI, Guerrero-Ferreira RC, Goldie KN, Stahlberg H, Leiman PG

EMDB-3393:
Cryo-electron microscopy structure of the hexagonal pre-attachment T4 baseplate-tail tube complex: locally masked refinement of the intermediate baseplate
Method: single particle / : Taylor NMI, Guerrero-Ferreira RC, Goldie KN, Stahlberg H, Leiman PG

EMDB-3394:
Cryo-electron microscopy structure of the hexagonal pre-attachment T4 baseplate-tail tube complex: locally masked refinement of the upper peripheral baseplate
Method: single particle / : Taylor NMI, Guerrero-Ferreira RC, Goldie KN, Stahlberg H, Leiman PG

EMDB-3395:
Cryo-electron microscopy structure of the hexagonal pre-attachment T4 baseplate-tail tube complex: locally masked refinement of the lower peripheral baseplate
Method: single particle / : Taylor NMI, Guerrero-Ferreira RC, Goldie KN, Stahlberg H, Leiman PG

EMDB-3396:
Cryo-electron microscopy structure of the star-shaped, hubless post-attachment T4 baseplate
Method: single particle / : Taylor NMI, Guerrero-Ferreira RC, Goldie KN, Stahlberg H, Leiman PG

EMDB-3397:
Cryo-electron microscopy structure of the hexagonal pre-attachment T4 baseplate-tail tube complex: locally masked refinement of the tail tube
Method: single particle / : Taylor NMI, Guerrero-Ferreira RC, Goldie KN, Stahlberg H, Leiman PG

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

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External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

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