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- EMDB-25444: CryoEM map of the CNN-picked stalled contraction intermediate sta... -
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Open data
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Basic information
Entry | ![]() | |||||||||
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Title | CryoEM map of the CNN-picked stalled contraction intermediate state of bacteriophage A511. | |||||||||
![]() | CryoEM map of the CNN-picked stalled contraction intermediate state of bacteriophage A511. | |||||||||
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Biological species | ![]() | |||||||||
Method | single particle reconstruction / cryo EM / Resolution: 12.8 Å | |||||||||
![]() | Fraser A / Leiman PG | |||||||||
Funding support | 1 items
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![]() | ![]() Title: Identification of Low Population States in Cryo-EM Using Deep Learning Authors: Fraser A / Prokhorov NS / Miller JM / Knyazhanskaya ES / Leiman PG | |||||||||
History |
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Structure visualization
Supplemental images |
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Downloads & links
-EMDB archive
Map data | ![]() | 727.6 MB | ![]() | |
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Header (meta data) | ![]() ![]() | 6.8 KB 6.8 KB | Display Display | ![]() |
Images | ![]() | 37.8 KB | ||
Archive directory | ![]() ![]() | HTTPS FTP |
-Validation report
Summary document | ![]() | 458.1 KB | Display | ![]() |
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Full document | ![]() | 457.7 KB | Display | |
Data in XML | ![]() | 7.9 KB | Display | |
Data in CIF | ![]() | 9.2 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
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Links
EMDB pages | ![]() ![]() |
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Map
File | ![]() | ||||||||||||||||||||
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Annotation | CryoEM map of the CNN-picked stalled contraction intermediate state of bacteriophage A511. | ||||||||||||||||||||
Voxel size | X=Y=Z: 2.75 Å | ||||||||||||||||||||
Density |
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Symmetry | Space group: 1 | ||||||||||||||||||||
Details | EMDB XML:
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-Supplemental data
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Sample components
-Entire : Listeria virus A511
Entire | Name: ![]() |
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Components |
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-Supramolecule #1: Listeria virus A511
Supramolecule | Name: Listeria virus A511 / type: virus / ID: 1 / Parent: 0 / NCBI-ID: 40523 / Sci species name: Listeria virus A511 / Virus type: VIRION / Virus isolate: STRAIN / Virus enveloped: No / Virus empty: No |
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-Experimental details
-Structure determination
Method | cryo EM |
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![]() | single particle reconstruction |
Aggregation state | particle |
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Sample preparation
Buffer | pH: 7 |
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Vitrification | Cryogen name: ETHANE |
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Electron microscopy
Microscope | FEI TITAN KRIOS |
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Image recording | Film or detector model: GATAN K3 BIOQUANTUM (6k x 4k) / Average electron dose: 40.0 e/Å2 |
Electron beam | Acceleration voltage: 300 kV / Electron source: ![]() |
Electron optics | Illumination mode: FLOOD BEAM / Imaging mode: BRIGHT FIELD |
Experimental equipment | ![]() Model: Titan Krios / Image courtesy: FEI Company |
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Image processing
Final reconstruction | Resolution.type: BY AUTHOR / Resolution: 12.8 Å / Resolution method: FSC 0.143 CUT-OFF / Number images used: 955 |
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Initial angle assignment | Type: MAXIMUM LIKELIHOOD |
Final angle assignment | Type: MAXIMUM LIKELIHOOD |