[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 487 items for (author: ni & dc)

EMDB-43255:
Protective effect of human non-neutralizing cross-reactive spike antibodies elicited by SARS-CoV-2 mRNA vaccination

EMDB-41869:
BG505.664 SOSIP in complex with polyclonal antibodies from NHP 8131 (gp120 glycan hole, gp41 glycan hole/fusion peptide and trimer base epitopes)

EMDB-41870:
BG505.664 Env SOSIP in complex with polyclonal antibodies from NHP 8131 (gp120-gp120 interface epitope)

EMDB-41871:
BG505.664 Env SOSIP in complex with polyclonal antibodies from NHP 8147 (C3/V5, V1/V2/V3 apex, gp41 glycan hole/fusion peptide and trimer base epitopes)

EMDB-41872:
BG505.664 Env SOSIP in complex with polyclonal antibodies from NHP 8147 (gp120 glycan hole epitope)

EMDB-41972:
GT1.1 SOSIP in complex with wk39 polyclonal antibodies from NHP A12N030 (CD4bs, C3V5 and base epitopes)

EMDB-41973:
GT1.1 SOSIP in complex with wk39 polyclonal antibodies from NHP A12N030 (gp41GH/FP and base epitopes)

EMDB-41974:
GT1.1 SOSIP in complex with wk39 polyclonal antibodies from NHP DC8G (gp41GH/FP and gp120GH epitopes)

EMDB-41975:
GT1.1 SOSIP in complex with wk39 polyclonal antibodies from NHP DC8G (gp120GH and base epitopes)

EMDB-41976:
GT1.1 SOSIP in complex with wk39 polyclonal antibodies from NHP DC8G (V1V2V3 and gp120GH epitopes)

EMDB-41977:
GT1.1 SOSIP-CC2 in complex with wk80 polyclonal antibodies from NHP 8229 (V1V2V3, C3V5, CD4bs, gp41GH/FP and base epitopes)

EMDB-41978:
GT1.1 SOSIP-CC2 in complex with wk80 polyclonal antibodies from NHP 8239 (gp120GH, gp41GH/FP, CD4bs, and base epitopes)

EMDB-40796:
BG505 GT1.1 SOSIP in complex with NHP Fabs 12C11 and RM20A3

EMDB-42578:
Subtomogram average of the Metallosphaera javensis AS-7 Surface layer

EMDB-42579:
Subtomogram average of the the Metallosphaera javensis AS-7 primed nanotube

EMDB-44246:
Cryo-EM structure of HIV-1 JRFL v6 Env in complex with vaccine-elicited, Membrane Proximal External Region (MPER) directed antibody DH1317.4.

EMDB-41578:
mGluR3 class 1 in the presence of the antagonist LY 341495

EMDB-45242:
mGluR3 in the presence of the antagonist LY 341495 and positive allosteric modulator VU6023326 class 2

EMDB-43779:
Rat GluN1-GluN2B NMDA receptor channel in complex with glycine, glutamate, and EU-1622-A, in open-channel conformation

EMDB-43780:
Rat GluN1-GluN2B NMDA receptor channel in complex with glycine, glutamate, and EU-1622-A, in nonactive1 conformation

EMDB-43781:
Rat GluN1-GluN2B NMDA receptor channel in apo conformation

EMDB-43782:
Rat GluN1-GluN2B NMDA receptor channel in complex with glycine

EMDB-43783:
Rat GluN1-GluN2B NMDA receptor channel in complex with glutamate

EMDB-44586:
Rat GluN1-GluN2B NMDA receptor channel in complex with glycine, glutamate, and EU-1622-A, in open-channel conformation, C1 symmetry

EMDB-41501:
mGluR3 in the presence of the agonist LY379268 and PAM VU6023326

EMDB-41567:
Metabotropic glutamate receptor 3 class 3 bound to antagonist LY 341495

EMDB-41568:
mGluR3 in the presence of the agonist LY379268

EMDB-41577:
mGluR3 in the presence of the antagonist LY 341495 and positive allosteric modulator VU6023326

EMDB-44861:
metabotropic glutamate receptor subtype three bound to the antagonist LY 341495, class two

EMDB-44552:
Septin Hexameric Complex SEPT2/SEPT6/SEPT7 of Ciona intestinalis by Cryo-EM

EMDB-44555:
Septin Tetrameric Complex SEPT7/SEPT9 of Ciona intestinalis by Cryo-EM

EMDB-18878:
Cryo-EM structure of the Asgard archaeal Argonaute HrAgo1 bound to a guide RNA

EMDB-43712:
Human EBP complexed with compound 1

EMDB-43713:
Human EBP complexed with compound 3a

EMDB-28966:
CryoEM map of de novo designed oligomeric protein C4-71_6x

EMDB-28967:
CryoEM map of de novo designed oligomeric protein C4-71_8x

EMDB-28968:
CryoEM map of de novo designed oligomeric protein C6-71

EMDB-28969:
CryoEM map of de novo designed oligomeric protein C6-71_6x

EMDB-28970:
CryoEM map of de novo designed oligomeric protein C6-71_8x

EMDB-28971:
CryoEM map of de novo designed oligomeric protein C8-71_6x

EMDB-28972:
CryoEM map of de novo designed oligomeric protein C8-71_8x

EMDB-28973:
CryoEM map of de novo designed oligomeric protein C4-81

EMDB-28974:
CryoEM map of designed oligomeric protein C4-71

EMDB-40797:
BG505 GT1.1 SOSIP in complex with NHP Fabs 21N13, 21M20 and RM20A3

EMDB-42375:
Deinococcus aerius TR0125 C-glucosyl deglycosidase (CGD), cryo-EM

EMDB-40815:
BG505 SOSIP.664 in complex with wk26 human polyclonal antibodies C3V5, V1V3, N611 and base from participant 017

EMDB-40816:
BG505 SOSIP.664 in complex with wk26 human polyclonal antibodies gp41-N611/FP and base from participant 03

EMDB-40817:
BG505 SOSIP.664 in complex with wk26 human polyclonal antibodies gp41-N611/FP and base from participant 07

EMDB-40818:
BG505 SOSIP.664 in complex with wk26 human polyclonal antibodies gp120-GH and base from participant 09

EMDB-40819:
BG505 SOSIP.664 in complex with wk26 human polyclonal antibodies C3V5, V1V3, gp41-GH/FP and base from participant 11

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more