[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 90 items for (author: ng & bg)

EMDB-18594:
Cryo-EM structure of E. coli cytochrome bo3 quinol oxidase assembled in peptidiscs
Method: single particle / : Gao Y, Zhang Y, Hakke S, Peters PJ, Ravelli RBG

EMDB-29279:
Cryo-EM structure of a group II intron immediately before branching
Method: single particle / : Haack DB, Rudolfs BG, Zhang C, Lyumkis D, Toor N

EMDB-35904:
AtSLAC1 8D mutant in closed state
Method: single particle / : Lee Y, Lee S

EMDB-35920:
AtSLAC1 in open state
Method: single particle / : Lee Y, Lee S

EMDB-34303:
AtSLAC1 6D mutant in closed state
Method: single particle / : Lee Y, Lee S

EMDB-34304:
AtSLAC1 6D mutant in open state
Method: single particle / : Lee Y, Lee S

EMDB-41617:
CryoEM structure of PI3Kalpha
Method: single particle / : Valverde R, Shi H, Holliday M, Sun M

EMDB-18010:
Charging of vitreous samples in cryogenic electron microscopy mitigated by graphene - BfrB - Dataset 4 - Quantifoil 300 mesh R1.2/1.3 with Graphene - Large Beam
Method: single particle / : van schayck JP, Zhang Y, Ravelli RBG

EMDB-18028:
Charging of vitreous samples in cryogenic electron microscopy mitigated by graphene - BfrB - Dataset 2 - Quantifoil 300 mesh R1.2/1.3 with Graphene - Small Beam
Method: single particle / : van schayck JP, Zhang Y, Ravelli RBG

EMDB-18029:
Charging of vitreous samples in cryogenic electron microscopy mitigated by graphene - BfrB - Dataset 1 - Quantifoil 300 mesh R1.2/1.3 - Small Beam
Method: single particle / : van schayck JP, Zhang Y, Ravelli RBG

EMDB-18030:
Charging of vitreous samples in cryogenic electron microscopy mitigated by graphene - BfrB - Dataset 3 - Quantifoil 300 mesh R1.2/1.3 - Large Beam
Method: single particle / : van schayck JP, Zhang Y, Ravelli RBG

EMDB-29419:
Cryo-EM structure of engineered hepatitis C virus E1E2 ectodomain in complex with antibodies AR4A, HEPC74, and IGH520
Method: single particle / : Metcalf MC, Ofek G

EMDB-40890:
Human heavy chain apoferritin prepared with axisymmetric blotting.
Method: single particle / : Glaeser RM, Han BG, Avila-Sakar A, Remis JP

EMDB-14619:
Cryo-EM structure of POLRMT mutant.
Method: single particle / : Das H, Hallberg BM

EMDB-15389:
3 A CRYO-EM STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS FERRITIN FROM TIMEPIX3 detector
Method: single particle / : Zhang Y, van Schayck JP, Knoops K, Peters PJ, Ravelli RBG

EMDB-13736:
Cryo-EM structure of POLRMT in free form.
Method: single particle / : Das H, Hallberg BM

EMDB-13796:
2021-10-18
Method: single particle / : Das H, Hallberg BM

EMDB-13735:
Mitochondrial DNA dependent RNA polymerase homodimer.
Method: single particle / : Das H, Hallberg BM

EMDB-31559:
Cryo-EM structure of BsClpP-ADEP1 complex at pH 6.5
Method: single particle / : Kim L, Lee BG, Kim MK, Kwon DH, Kim H, Brotz-Oesterhelt H, Roh SH, Song HK

EMDB-31560:
Cryo-EM structure of apo BsClpP at pH 6.5
Method: single particle / : Kim L, Lee BG

EMDB-31561:
Cryo-EM structure of BsClpP-ADEP1 complex at pH 4.2
Method: single particle / : Kim L, Lee BG, Kim MK, Kwon DH, Kim H, Brotz-Oesterhelt H, Roh SH, Song HK

EMDB-31562:
Cryo-EM structure of apo BsClpP at pH 4.2
Method: single particle / : Kim L, Lee BG

EMDB-31454:
Cryo-EM structure of TELO2-TTI1-TTI2 complex
Method: single particle / : Cho Y, Kim Y

EMDB-13036:
Cryo-EM structure of the human TRPA1 ion channel in complex with the antagonist 3-60, conformation 2
Method: single particle / : Grieben M, Pike ACW, Saward BG, Wang D, Mukhopadhyay SMM, Moreira T, Chalk R, MacLean EM, Marsden BD, Burgess-Brown NA, Bountra C, Schofield CJ, Carpenter EP

EMDB-13037:
Cryo-EM structure of the human TRPA1 ion channel in complex with the antagonist 3-60, conformation 1
Method: single particle / : Grieben M, Pike ACW, Saward BG, Wang D, Mukhopadhyay SMM, Moreira T, Chalk R, MacLean EM, Marsden BD, Burgess-Brown NA, Bountra C, Schofield CJ, Carpenter EP, Structural Genomics Consortium (SGC)

EMDB-14153:
SARS-CoV-2 Spike, C3 symmetry
Method: single particle / : Naismith JH, Yang Y, Liu JW

EMDB-14152:
SARS-CoV-2 Spike with ethylbenzamide-tri-iodo Siallyllactose, C3 symmetry
Method: single particle / : Naismith JH, Yang Y, Liu JW

EMDB-14154:
SARS-CoV-2 Spike with ethylbenzamide-tri-iodo Siallyllactose, C1 symmetry
Method: single particle / : Naismith JH, Yang Y, Liu JW

EMDB-14155:
SARS-CoV-2 Spike, C1 symmetry
Method: single particle / : Naismith JH, Yang Y, Liu JW

EMDB-13785:
Cryo-EM map of clamped S.cerevisiae condensin-DNA complex (pentamer dataset)
Method: single particle / : Lee BG, Rhodes J, Lowe J

EMDB-13786:
Cryo-EM structure of S.cerevisiae condensin Ycg1-Brn1-DNA complex
Method: single particle / : Lee BG, Rhodes J, Lowe J

EMDB-13787:
Cryo-EM map of clamped S.cerevisiae condensin complex on circular DNA
Method: single particle / : Lee BG, Rhodes J, Lowe J

EMDB-13788:
Cryo-EM map of S.cerevisiae condensin Ycg1-Brn1 complex on circular DNA
Method: single particle / : Lee BG, Rhodes J, Lowe J

EMDB-13783:
Cryo-EM structure of clamped S.cerevisiae condensin-DNA complex (Form I)
Method: single particle / : Lee BG, Rhodes J, Lowe J

EMDB-13784:
Cryo-EM structure of clamped S.cerevisiae condensin-DNA complex (form II)
Method: single particle / : Lee BG, Rhodes J, Lowe J

EMDB-24928:
Cryo-EM Structure of dolphin Prestin: Sensor Up (compact) state
Method: single particle / : Bavi N, Perozo E

EMDB-24930:
Cryo-EM Structure of dolphin Prestin: Inhibited I (Chloride + Salicylate)
Method: single particle / : Bavi N, Clark MD

EMDB-24931:
Cryo-EM Structure of dolphin Prestin: Sensor Down I (Expanded) state
Method: single particle / : Bavi N, Clark MD

EMDB-24932:
Cryo-EM Structure of dolphin Prestin: Sensor Down II (Expanded II) state
Method: single particle / : Bavi N, Clark MD

EMDB-24933:
Cryo-EM Structure of dolphin Prestin: Intermediate state
Method: single particle / : Bavi N, Clark MD

EMDB-24934:
Cryo-EM Structure of dolphin Prestin: Inhibited II (Sulfate +Salicylate) state
Method: single particle / : Bavi N, Clark MD

EMDB-13153:
2.43 A Mycobacterium marinum EspB.
Method: single particle / : Gijsbers A, Zhang Y, Vinciauskaite V, Siroy A, Ye G, Tria G, Mathew A, Sanchez-Puig N, Lopez-Iglesias C, Peters PJ, Ravelli RBG

EMDB-13154:
2.29 A Mycobacterium tuberculosis EspB.
Method: single particle / : Gijsbers A, Zhang Y, Vinciauskaite V, Siroy A, Gao Y, Tria G, Mathew A, Sanchez-Puig N, Lopez-Iglesias C, Peters PJ, Ravelli RBG

EMDB-12876:
Cryo-EM map of Scc2 bound to cohesin trimer
Method: single particle / : Gonzalez Llamazares A, Lee B, Lowe J

EMDB-12880:
Scc2 bound to cohesin ATPase heads
Method: single particle / : Gonzalez Llamazares A, Lee B, Lowe J

EMDB-12887:
Folded elbow of cohesin
Method: single particle / : Gonzalez Llamazares A, Lee BG, Collier J, Nasmyth KA, Lowe J

EMDB-12888:
Pds5 bound to cohesin ATPase heads
Method: single particle / : Gonzalez Llamazares A, Lee B, Lowe J

EMDB-12889:
Engaged ATPase heads of cohesin
Method: single particle / : Gonzalez Llamazares A, Lee B, Lowe J

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more