[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 578 items for (author: lin & ty)

EMDB-40825:
10E8-GT10.2 immunogen in complex with human Fab 10E8 and mouse Fab W6-10
Method: single particle / : Huang J, Ozorowski G, Ward AB

PDB-8sx3:
10E8-GT10.2 immunogen in complex with human Fab 10E8 and mouse Fab W6-10
Method: single particle / : Huang J, Ozorowski G, Ward AB

EMDB-43753:
Yeast U1 snRNP with humanized U1C Zinc-Finger domain
Method: single particle / : Shi SS, Kuang ZL, Zhao R

PDB-8w2o:
Yeast U1 snRNP with humanized U1C Zinc-Finger domain
Method: single particle / : Shi SS, Kuang ZL, Zhao R

EMDB-17924:
Cryo-EM structure of human Elp123 in complex with tRNA, acetyl-CoA, 5'-deoxyadenosine and methionine
Method: single particle / : Abbassi N, Jaciuk M, Lin TY, Glatt S

EMDB-17925:
Cryo-EM structure of human Elp123 in complex with 5'-deoxyadenosine and methionine
Method: single particle / : Abbassi N, Jaciuk M, Lin TY, Glatt S

EMDB-17926:
Cryo-EM structure of human Elp123 in complex with tRNA, S-ethyl-CoA, 5'-deoxyadenosine and methionine
Method: single particle / : Abbassi N, Jaciuk M, Lin TY, Glatt S

EMDB-17927:
Cryo-EM structure of human Elp123 in complex with tRNA, desulpho-CoA, 5'-deoxyadenosine and methionine
Method: single particle / : Abbassi N, Jaciuk M, Lin TY, Glatt S

EMDB-17766:
CryoEM structure of Nal1 protein, allele SPIKE, from Oryza sativa japonica group
Method: single particle / : Huang LY, Rety S, Xi XG

EMDB-17768:
CryoEM structure of Nal1 protein, allele IR64, from Oryza sativa indica cultivar
Method: single particle / : Huang LY, Rety S, Xi XG

PDB-8pn1:
CryoEM structure of Nal1 protein, allele SPIKE, from Oryza sativa japonica group
Method: single particle / : Huang LY, Rety S, Xi XG

PDB-8pn2:
CryoEM structure of Nal1 protein, allele IR64, from Oryza sativa indica cultivar
Method: single particle / : Huang LY, Rety S, Xi XG

EMDB-37240:
SARS-CoV-2 Omicron spike in complex with 5817 Fab
Method: single particle / : Cao L, Wang X

EMDB-37241:
The interface structure of Omicron RBD binding to 5817 Fab
Method: single particle / : Cao L, Wang X

EMDB-16939:
cryo-EM structure of human tRNA(GlnUUG) - PUS3 and PUS7 modified
Method: single particle / : Biela AP

EMDB-16940:
cryo-EM structure of human tRNA(GlnUUG)
Method: single particle / : Biela AP

EMDB-16941:
cryo-EM structure of human tRNA(GlnUUG) - PUS4 and PUS7 modified
Method: single particle / : Biela AP

EMDB-16943:
cryo-EM structure of human tRNA(GlyCCC)
Method: single particle / : Biela AP

EMDB-16945:
cryo-EM structure of human tRNA(GlyCCC) - PUS4 and PUS7 modified
Method: single particle / : Biela AP

EMDB-16946:
cryo-EM structure of human tRNA(GlyCCC) - PUS3, PUS4 and PUS7 modified
Method: single particle / : Biela AP

EMDB-16947:
cryo-EM structure of human tRNA(GluUUC)
Method: single particle / : Biela AP

EMDB-16948:
cryo-EM structure of human tRNA(GluUUC) - PUS4 and PUS7 modified
Method: single particle / : Biela AP

EMDB-43658:
SARS-CoV-2 S (C.37 Lambda variant) plus S309, S2L20, and S2X303 Fabs
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-43659:
SARS-CoV-2 S NTD (C.37 Lambda variant) plus S2L20 and S2X303 Fabs, local refinement
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-43660:
SARS-CoV-2 S RBD (C.37 Lambda variant) plus S309 Fab, local refinement
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-8vye:
SARS-CoV-2 S (C.37 Lambda variant) plus S309, S2L20, and S2X303 Fabs
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-8vyf:
SARS-CoV-2 S NTD (C.37 Lambda variant) plus S2L20 and S2X303 Fabs, local refinement
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-8vyg:
SARS-CoV-2 S RBD (C.37 Lambda variant) plus S309 Fab, local refinement
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-29941:
HPV16 E6-E6AP-p53 complex
Method: single particle / : Bratkowski MA, Wang JCK, Hao Q, Nile AH

EMDB-38313:
Structure of yeast replisome associated with FACT and histone hexamer, the region of FACT-Histones optimized local map
Method: single particle / : Li N, Gao Y, Yu D, Gao N, Zhai Y

EMDB-38314:
Structure of yeast replisome associated with FACT and histone hexamer,Conformation-2
Method: single particle / : Li N, Gao Y, Yu D, Gao N, Zhai Y

EMDB-38315:
Structure of yeast replisome associated with FACT and histone hexamer, the region of polymerase epsilon optimized local map
Method: single particle / : Li N, Gao Y, Yu D, Gao N, Zhai Y

EMDB-38316:
Structure of yeast replisome associated with FACT and histone hexamer, Conformation-1
Method: single particle / : Li N, Gao Y, Yu D, Gao N, Zhai Y

EMDB-38317:
Structure of yeast replisome associated with FACT and histone hexamer, Composite map
Method: single particle / : Li N, Gao Y, Yu D, Gao N, Zhai Y

PDB-8xgc:
Structure of yeast replisome associated with FACT and histone hexamer, Composite map
Method: single particle / : Li N, Gao Y, Yu D, Gao N, Zhai Y

EMDB-29227:
cryoEM structure of a broadly neutralizing antibody STI-9167
Method: single particle / : Bajic G

EMDB-17445:
Cryo-EM structure of the c-di-GMP-free FleQ-FleN master regulator complex of P. aeruginosa
Method: single particle / : Torres-Sanchez L, Krasteva PV

EMDB-17581:
Cryo-EM structure of the c-di-GMP-bound FleQ-FleN master regulator complex from Pseudomonas aeruginosa
Method: single particle / : Torres-Sanchez LT, Krasteva PV

PDB-8p53:
Cryo-EM structure of the c-di-GMP-free FleQ-FleN master regulator complex of P. aeruginosa
Method: single particle / : Torres-Sanchez L, Krasteva PV

PDB-8pb9:
Cryo-EM structure of the c-di-GMP-bound FleQ-FleN master regulator complex from Pseudomonas aeruginosa
Method: single particle / : Torres-Sanchez LT, Krasteva PV

EMDB-40242:
BG505 MD39 SOSIP in complex with Rh.NJ85 wk12 gp120GH, N611/FP, and base epitope polyclonal antibodies
Method: single particle / : Lee WH, Ozorowski G, Torres JL, Ward AB

EMDB-40243:
BG505 MD39 SOSIP in complex with Rh.NJ86 wk12 V1V3, C3V5, N611/FP, and base epitope polyclonal antibodies
Method: single particle / : Lee WH, Ozorowski G, Torres JL, Ward AB

EMDB-40244:
BG505 MD39 SOSIP in complex with Rh.NJ76 wk12 C3V5, N611/FP, and base epitope polyclonal antibodies
Method: single particle / : Lee WH, Ozorowski G, Torres JL, Ward AB

EMDB-40252:
BG505 MD39 SOSIP in complex with Rh.NK04 wk12 gp120 glycan hole and base epitope polyclonal antibodies
Method: single particle / : Lee WS, Ozorowski G, Torres JL, Ward AB

EMDB-40254:
BG505 MD39 SOSIP in complex with Rh.NJ75 wk12 gp120 glycan hole and base epitope polyclonal antibodies
Method: single particle / : Lee WS, Ozorowski G, Torres JL, Ward AB

EMDB-40255:
BG505 MD39 SOSIP in complex with Rh.NJ87 wk12 C3V5 and base epitope polyclonal antibodies
Method: single particle / : Lee WS, Ozorowski G, Torres JL, Ward AB

EMDB-40256:
BG505 MD39 SOSIP in complex with Rh.NJ84 wk12 V1V3, gp120 glycan hole and base epitope polyclonal antibodies
Method: single particle / : Lee WS, Ozorowski G, Torres JL, Ward AB

EMDB-40257:
BG505 MD39 SOSIP in complex with Rh.NJ77 wk12 V1V3, C3V5, N611/FP and base epitope polyclonal
Method: single particle / : Lee WS, Ozorowski G, Torres JL, Ward AB

EMDB-16328:
Outer membrane attachment porin OmpM1 from Veillonella parvula
Method: single particle / : Silale A, van den Berg B

EMDB-16332:
Outer membrane attachment porin OmpM1 from Veillonella parvula, native
Method: single particle / : Silale A, van den Berg B

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more