[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,022 items for (author: li & tc)

EMDB-43269:
Cryo-EM structure of heparosan synthase 2 from Pasteurella multocida with polysaccharide in the GlcNAc-T active site
Method: single particle / : Krahn JM, Pedersen LC, Liu J, Stancanelli E, Borgnia M, Vivarette E

EMDB-17945:
Tick-borne encephalitis virus (strain HYPR) immature particle
Method: single particle / : Fuzik T, Plevka P, Smerdova L, Novacek J

EMDB-17946:
Tick-borne encephalitis virus (strain Neudoerfl) immature particle
Method: single particle / : Fuzik T, Plevka P, Smerdova L, Novacek J

EMDB-17947:
Trimeric prM/E spike of Tick-borne encephalitis virus immature particle
Method: single particle / : Fuzik T, Plevka P, Smerdova L, Novacek J

PDB-8puv:
Trimeric prM/E spike of Tick-borne encephalitis virus immature particle
Method: single particle / : Fuzik T, Plevka P, Smerdova L, Novacek J

EMDB-43296:
Constituent EM map: Focused refinement S100A1 of mouse RyR1 in complex with S100A1 (EGTA-only dataset)
Method: single particle / : Weninger G, Marks AR

EMDB-17749:
The ERAD misfolded glycoprotein checkpoint complex from Chaetomium thermophilum (EDEM:PDI heterodimer).
Method: single particle / : Roversi P, Hitchman CJ, Lia A, Bayo Y

PDB-8pko:
The ERAD misfolded glycoprotein checkpoint complex from Chaetomium thermophilum (EDEM:PDI heterodimer).
Method: single particle / : Roversi P, Hitchman CJ, Lia A, Bayo Y

EMDB-42527:
Pre-fusion Measles virus fusion protein complexed with Fab 77
Method: single particle / : Zyla D, Saphire EO

EMDB-42539:
Structure of the Measles virus Fusion protein in the post-fusion conformation
Method: single particle / : Zyla D, Saphire EO

EMDB-42593:
Structure of the Measles virus Fusion protein in the pre-fusion conformation
Method: single particle / : Zyla D, Saphire EO

EMDB-42595:
Structure of the Measles virus Fusion protein in the pre-fusion conformation with bound [FIP-HRC]2-PEG11
Method: single particle / : Zyla D, Saphire EO

EMDB-43827:
Fab 77-stabilized MeV F ectodomain fragment
Method: single particle / : Zyla D, Saphire EO

EMDB-17808:
Tick-borne encephalitis virus Kuutsalo-14 prM3E3 trimer
Method: single particle / : Anastasina M, Domanska A, Pulkkinen LIA, Butcher SJ

EMDB-17809:
Tick-borne encephalitis virus Kuutsalo-14 immature virus particle
Method: single particle / : Anastasina M, Domanska A, Pulkkinen LIA, Butcher SJ

PDB-8ppq:
Tick-borne encephalitis virus Kuutsalo-14 prM3E3 trimer
Method: single particle / : Anastasina M, Domanska A, Pulkkinen LIA, Butcher SJ

EMDB-50019:
cryoEM structure of Photosystem II averaged across S2-S3 states at 1.71 Angstrom resolution
Method: single particle / : Hussein R, Graca A, Zouni A, Messinger J, Schroder WP

PDB-9evx:
cryoEM structure of Photosystem II averaged across S2-S3 states at 1.71 Angstrom resolution
Method: single particle / : Hussein R, Graca A, Zouni A, Messinger J, Schroder WP

EMDB-18614:
Inactivated tick-borne encephalitis virus (TBEV) vaccine strain Sofjin-Chumakov
Method: single particle / : Moiseenko AV, Zhang Y, Vorovitch M, Ivanova A, Liu Z, Osolodkin DI, Egorov A, Ishmukhametov A, Sokolova OS

PDB-8qrh:
Inactivated tick-borne encephalitis virus (TBEV) vaccine strain Sofjin-Chumakov
Method: single particle / : Moiseenko AV, Zhang Y, Vorovitch M, Ivanova A, Liu Z, Osolodkin DI, Egorov A, Ishmukhametov A, Sokolova OS

PDB-9euu:
Structure of recombinant alpha-synuclein fibrils 1B capable of seeding GCIs in vivo
Method: helical / : Burger D, Kashyrina M, Lewis A, De Nuccio F, Mohammed I, de La Seigliere H, van den Heuvel L, Feuillie C, Verchere J, Berbon M, Arotcarena M, Retailleau A, Bezard E, Laferriere F, Loquet A, Bousset L, Baron T, Lofrumento DD, De Giorgi F, Stahlberg H, Ichas F

EMDB-50218:
Negative staining EM map for Mis18 core complex
Method: single particle / : Jeyaprakash AA, Medina-Pritchard B

EMDB-50219:
Negative staining EM map for Mis18 core complex
Method: single particle / : Jeyaprakash AA, Medina-Pritchard B

EMDB-50220:
Negative staining EM map for Mis18 core complex
Method: single particle / : Jeyaprakash AA, Medina-Pritchard B

EMDB-18134:
Cryo-EM structure of the DNA polymerase holoenzyme E9-A20-D4 of vaccinia virus
Method: single particle / : Burmeister WP, Ballandras-Colas A, Boettcher B, Grimm C

PDB-8q3r:
Cryo-EM structure of the DNA polymerase holoenzyme E9-A20-D4 of vaccinia virus
Method: single particle / : Burmeister WP, Ballandras-Colas A, Boettcher B, Grimm C

EMDB-43683:
Cryo-EM structure of FLVCR2 in the inward-facing state with choline bound
Method: single particle / : Cater RJ, Mancia F

EMDB-43684:
Cryo-EM structure of FLVCR2 in the outward-facing state with choline bound
Method: single particle / : Cater RJ, Mancia F

PDB-8vzn:
Cryo-EM structure of FLVCR2 in the inward-facing state with choline bound
Method: single particle / : Cater RJ, Mancia F

PDB-8vzo:
Cryo-EM structure of FLVCR2 in the outward-facing state with choline bound
Method: single particle / : Cater RJ, Mancia F

EMDB-40180:
MsbA bound to cerastecin C
Method: single particle / : Chen Y, Klein D

PDB-8gk7:
MsbA bound to cerastecin C
Method: single particle / : Chen Y, Klein D

EMDB-17626:
E. coli RNA polymerase paused at ops site
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

EMDB-17632:
fully recruited RfaH bound to E. coli transcription complex paused at ops site (alternative state of RfaH)
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

EMDB-17646:
transcription complex paused at ops site and bound to autoinhibited RfaH, not fully complementary scaffold
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

EMDB-17647:
fully recruited RfaH bound to E. coli transcription complex paused at ops site (not fully complementary scaffold; alternative state of RfaH)
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

EMDB-17657:
E. coli RNA polymerase paused at ops site (non-complementary scaffold)
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

EMDB-17668:
E. coli transcription complex paused at ops site with fully recruited RfaH
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

EMDB-17679:
autoinhibited RfaH bound to E. coli transcription complex paused at ops site (encounter complex)
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

EMDB-17681:
backtracked E. coli transcription complex paused at ops site and bound to RfaH
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

EMDB-17685:
E. coli transcription complex paused at ops site and bound to RfaH and NusA
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

EMDB-17686:
fully recruited RfaH bound to E. coli transcription complex paused at ops site (not complementary scaffold)
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

PDB-8pdy:
E. coli RNA polymerase paused at ops site
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

PDB-8pen:
fully recruited RfaH bound to E. coli transcription complex paused at ops site (alternative state of RfaH)
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

PDB-8pfg:
autoinhibited RfaH bound to E. coli transcription complex paused at ops site (encounter complex), not fully complementary scaffold
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

PDB-8pfj:
fully recruited RfaH bound to E. coli transcription complex paused at ops site (not fully complementary scaffold; alternative state of RfaH)
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

PDB-8ph9:
E. coli RNA polymerase paused at ops site (non-complementary scaffold)
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

PDB-8phk:
fully recruited RfaH bound to E. coli transcription complex paused at ops site
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

PDB-8pib:
autoinhibited RfaH bound to E. coli transcription complex paused at ops site (encounter complex)
Method: single particle / : Zuber PK, Said N, Hilal T, Loll B, Wahl MC, Knauer SH

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more