[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 347 items for (author: klein & c)

EMDB-52576:
High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum
Method: single particle / : Wild K, Klein MA, Sinning I

PDB-9i1w:
High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum
Method: single particle / : Wild K, Klein MA, Sinning I

EMDB-60263:
Cryo-EM structure of R-eLACCO2 in the lactate-bound state
Method: single particle / : Kamijo Y, Kusakizako T, Nureki O, Campbell RE, Nasu Y

PDB-8zmz:
Cryo-EM structure of R-eLACCO2 in the lactate-bound state
Method: single particle / : Kamijo Y, Kusakizako T, Nureki O, Campbell RE, Nasu Y

EMDB-70018:
BG505-DS SOSIP in complex with 007 bNAb Fabs - Class 0 (unbound)
Method: single particle / : DeLaitsch AT, Bjorkman PJ

EMDB-70019:
BG505-DS SOSIP in complex with 007 bNAb Fabs - Class 1 (1 Fab bound)
Method: single particle / : DeLaitsch AT, Bjorkman PJ

EMDB-70020:
BG505-DS SOSIP in complex with 007 bNAb Fabs - Class 2 (2 Fabs bound)
Method: single particle / : DeLaitsch AT, Bjorkman PJ

EMDB-70021:
BG505-DS SOSIP in complex with 007 bNAb Fabs - Class 3 (3 Fabs bound)
Method: single particle / : DeLaitsch AT, Bjorkman PJ

EMDB-70022:
BG505 SOSIP in complex with 007 bNAb IgG1 - trimer-dimer class
Method: single particle / : DeLaitsch AT, Bjorkman PJ

PDB-9o2q:
BG505-DS SOSIP in complex with 007 bNAb Fabs - Class 0 (unbound)
Method: single particle / : DeLaitsch AT, Bjorkman PJ

PDB-9o2r:
BG505-DS SOSIP in complex with 007 bNAb Fabs - Class 1 (1 Fab bound)
Method: single particle / : DeLaitsch AT, Bjorkman PJ

PDB-9o2s:
BG505-DS SOSIP in complex with 007 bNAb Fabs - Class 2 (2 Fabs bound)
Method: single particle / : DeLaitsch AT, Bjorkman PJ

PDB-9o2t:
BG505-DS SOSIP in complex with 007 bNAb Fabs - Class 3 (3 Fabs bound)
Method: single particle / : DeLaitsch AT, Bjorkman PJ

PDB-9o2u:
BG505 SOSIP in complex with 007 bNAb IgG1 - trimer-dimer class
Method: single particle / : DeLaitsch AT, Bjorkman PJ

EMDB-54278:
Electron tomogram of resin-embedded, apoptosis-induced HeLa cell expressing Apaf1-GFP
Method: electron tomography / : Borgeaud AC, Ganeva I, Klein C, Stooss A, Ross-Kaschitza D, Wu L, Riley JS, Tait SWG, Lemmin T, Kaufmann T, Kukulski W

EMDB-54279:
Cryo-electron tomogram of apoptosis-induced HeLa cell expressing Apaf1-GFP
Method: electron tomography / : Borgeaud AC, Ganeva I, Klein C, Stooss A, Ross-Kaschitza D, Wu L, Riley JS, Tait SWG, Lemmin T, Kaufmann T, Kukulski W

EMDB-54280:
Cryo-electron tomogram of apoptosis-induced HeLa cell expressing Apaf1-SNAP
Method: electron tomography / : Borgeaud AC, Ganeva I, Klein C, Stooss A, Ross-Kaschitza D, Wu L, Riley JS, Tait SWG, Lemmin T, Kaufmann T, Kukulski W

EMDB-54281:
Electron tomogram of resin-embedded, apoptosis-induced HeLa cell expressing Apaf1-GFP
Method: electron tomography / : Borgeaud AC, Ganeva I, Klein C, Stooss A, Ross-Kaschitza D, Wu L, Riley JS, Tait SWG, Lemmin T, Kaufmann T, Kukulski W

EMDB-46649:
Cryo-EM structure of the BG505 SOSIPv2
Method: single particle / : DeLaitsch AT, Bjorkman PJ

PDB-9d8v:
Cryo-EM structure of the BG505 SOSIPv2
Method: single particle / : DeLaitsch AT, Bjorkman PJ

EMDB-51901:
SARS-CoV-2 S protein in complex with pT1679 Fab
Method: single particle / : Hansen G, Benecke T, Vollmer B, Gruenewald K, Krey T

PDB-9h6u:
SARS-CoV-2 S protein in complex with pT1679 Fab
Method: single particle / : Hansen G, Benecke T, Vollmer B, Gruenewald K, Krey T

EMDB-51868:
Escherichia phage EmilHeitz (Bas49) baseplate and tail fibers
Method: single particle / : Klein-Sousa V, Roa-Eguiara A, Taylor NMI

EMDB-51869:
Escherichia phage MaxBurger (Bas54) baseplate and tail fibers
Method: single particle / : Klein-Sousa V, Roa-Eguiara A, Taylor NMI

EMDB-51870:
Escherichia phage Paracelsus (Bas36) baseplate, proximal tail fiber and tail.
Method: single particle / : Klein-Sousa V, Roa-Eguiara A, Taylor NMI

EMDB-45757:
Human 39S mitoribosome in complex with antibiotic Linezolid
Method: single particle / : Raskar T, Bibel B, Galonic Fujimori D, Fraser J

PDB-9cn3:
Human 39S mitoribosome in complex with antibiotic Linezolid
Method: single particle / : Raskar T, Bibel B, Galonic Fujimori D, Fraser J

EMDB-42363:
Cryo-EM structure of the BG505 SOSIPv2 in complex with bNAb 05_B08 Fabs
Method: single particle / : DeLaitsch AT, Bjorkman PJ

EMDB-42364:
Cryo-EM structure of the BG505 SOSIPv2 in complex with bNAb 01_D03 Fabs
Method: single particle / : DeLaitsch AT, Bjorkman PJ

EMDB-42365:
Cryo-EM structure of the BG505 SOSIPv2 in complex with bNAb 04_A06 Fabs
Method: single particle / : DeLaitsch AT, Bjorkman PJ

EMDB-42366:
Cryo-EM structure of the BG505 SOSIPv2 in complex with bNAb 04_A06 and PGDM1400 Fabs
Method: single particle / : DeLaitsch AT, Bjorkman PJ

PDB-8ulr:
Cryo-EM structure of the BG505 SOSIPv2 in complex with bNAb 05_B08 Fabs
Method: single particle / : DeLaitsch AT, Bjorkman PJ

PDB-8uls:
Cryo-EM structure of the BG505 SOSIPv2 in complex with bNAb 01_D03 Fabs
Method: single particle / : DeLaitsch AT, Bjorkman PJ

PDB-8ult:
Cryo-EM structure of the BG505 SOSIPv2 in complex with bNAb 04_A06 Fabs
Method: single particle / : DeLaitsch AT, Bjorkman PJ

PDB-8ulu:
Cryo-EM structure of the BG505 SOSIPv2 in complex with bNAb 04_A06 and PGDM1400 Fabs
Method: single particle / : DeLaitsch AT, Bjorkman PJ

EMDB-45443:
Dissecting human monoclonal antibody responses from mRNA and protein-based booster vaccinations against XBB1.5 SARS-CoV-2
Method: single particle / : Bajic G, Jaiswal D

EMDB-45444:
Dissecting human monoclonal antibody responses from mRNA and protein-based booster vaccinations against XBB1.5 SARS-CoV-2
Method: single particle / : Bajic G, Civljak A

PDB-9cci:
Dissecting human monoclonal antibody responses from mRNA and protein-based booster vaccinations against XBB1.5 SARS-CoV-2
Method: single particle / : Bajic G, Jaiswal D

PDB-9ccj:
Dissecting human monoclonal antibody responses from mRNA and protein-based booster vaccinations against XBB1.5 SARS-CoV-2
Method: single particle / : Bajic G, Civljak A

EMDB-52724:
cryoEM structure of HIV-1 KAKA/G225R mature CA hexamer
Method: single particle / : Zhu Y, Shen J, Shen Y, Xu J, Zhang P

PDB-9i8i:
cryoEM structure of HIV-1 KAKA/G225R mature CA hexamer
Method: single particle / : Zhu Y, Shen J, Shen Y, Xu J, Zhang P

EMDB-51821:
The structure from subtomogram averaging of HIV immature Gag with G225R mutation
Method: subtomogram averaging / : Zhu Y, Kleinpeter AB, Shen J, Freed OE, Zhang P

EMDB-51822:
The structure from subtomogram averaging of HIV-1 immature Gag with KAKA/G225R mutations
Method: subtomogram averaging / : Zhu Y, Kleinpeter AB, Shen J, Freed OE, Zhang P

EMDB-51823:
The structure from subtomogram averaging of HIV-1 immature Gag with KAKA/T8I/G225R mutations
Method: subtomogram averaging / : Zhu Y, Kleinpeter AB, Shen J, Freed OE, Zhang P

EMDB-51824:
The structure from subtomogram averaging of HIV-1 immature Gag with A77V/KAKA/T8I/G225R mutations
Method: subtomogram averaging / : Zhu Y, Kleinpeter AB, Shen J, Freed OE, Zhang P

EMDB-51825:
The structure from subtomogram averaging of HIV-1 immature Gag with KAKA/T8I mutations
Method: subtomogram averaging / : Zhu Y, Lucic A, Kleinpeter AB, Shen J, Freed OE, Zhang P

EMDB-51826:
The structure from subtomogram averaging of HIV-1 Gag with K227A mutation
Method: subtomogram averaging / : Zhu Y, Chen L, Kleinpeter AB, Shen J, Freed OE, Zhang P

EMDB-44556:
Structure of the extracellular domain of Protein Sevenless
Method: single particle / : Zhang J, Klein DE

PDB-9bhx:
Structure of the extracellular domain of Protein Sevenless
Method: single particle / : Zhang J, Klein DE

EMDB-18948:
Zorya anti-bacteriophage defense system ZorC WT
Method: single particle / : Hu H, Taylor NMI

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more