[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 865 items for (author: kay & le)

EMDB-56129:
Octameric C. elegans BORC, containing BORCS5, BORCS6, BORCS7, BORCS8, KXD1 and the shared BORC and BLoC-1 subunits, BLOC1S1, BLOC1S2 and Snapin
Method: single particle / : Amann SJ, de Araujo MEG, Grishkovskaya I, Huber LA, Haselbach D

EMDB-60263:
Cryo-EM structure of R-eLACCO2 in the lactate-bound state
Method: single particle / : Kamijo Y, Kusakizako T, Nureki O, Campbell RE, Nasu Y

PDB-8zmz:
Cryo-EM structure of R-eLACCO2 in the lactate-bound state
Method: single particle / : Kamijo Y, Kusakizako T, Nureki O, Campbell RE, Nasu Y

EMDB-12318:
Nematocida Huwe1 in closed conformation
Method: single particle / : Petrova O, Grishkovskaya I

PDB-7nh1:
Nematocida Huwe1 in closed conformation
Method: single particle / : Petrova O, Grishkovskaya I, Grabarczyk DB, Kessler D, Haselbach D, Clausen T

EMDB-48897:
Composite map for GluK2 in the apo state with asymmetric ligand binding domain
Method: single particle / : Gangwar SP, Yelshanskaya MV, Yen LY, Newton TP, Sobolevsky AI

EMDB-48898:
Composite map for GluK2 in the apo state with 2-fold symmetrical ligand-binding domain
Method: single particle / : Gangwar SP, Yelshanskaya MV, Yen LY, Newton TP, Sobolevsky AI

EMDB-48899:
Composite map for GluK2 in the open state, in complex with the positive allosteric modulator BPAM344 and agonist kainate
Method: single particle / : Gangwar SP, Yelshanskaya MV, Yen LY, Newton TP, Sobolevsky AI

EMDB-48900:
Composite map for GluK2-0xNeto2 in the apo state with asymmetric ligand-binding domain
Method: single particle / : Gangwar SP, Yelshanskaya MV, Yen LY, Newton TP, Sobolevsky AI

EMDB-48901:
Composite map for GluK2-1xNeto2 in the apo state
Method: single particle / : Gangwar SP, Yelshanskaya MV, Yen LY, Newton TP, Sobolevsky AI

EMDB-48902:
Composite map for GluK2-2xNeto2 in the apo state
Method: single particle / : Gangwar SP, Yelshanskaya MV, Yen LY, Newton TP, Sobolevsky AI

EMDB-48903:
Composite map for GluK2-0xNeto2 in the open state, in complex with the positive allosteric modulator BPAM344 and agonist kainate
Method: single particle / : Gangwar SP, Yelshanskaya MV, Yen LY, Newton TP, Sobolevsky AI

EMDB-48904:
Composite map for GluK2-1xNeto2 in the open state, in complex with the positive allosteric modulator BPAM344 and agonist kainate
Method: single particle / : Gangwar SP, Yelshanskaya MV, Yen LY, Newton TP, Sobolevsky AI

EMDB-48905:
Composite map for GluK2-2xNeto2 in the open state, in complex with the positive allosteric modulator BPAM344 and agonist kainate
Method: single particle / : Gangwar SP, Yelshanskaya MV, Yen LY, Newton TP, Sobolevsky AI

PDB-9n4l:
Composite map for GluK2 in the apo state with asymmetric ligand binding domain
Method: single particle / : Gangwar SP, Yelshanskaya MV, Yen LY, Newton TP, Sobolevsky AI

PDB-9n4m:
Composite map for GluK2 in the apo state with 2-fold symmetrical ligand-binding domain
Method: single particle / : Gangwar SP, Yelshanskaya MV, Yen LY, Newton TP, Sobolevsky AI

PDB-9n4n:
Composite map for GluK2 in the open state, in complex with the positive allosteric modulator BPAM344 and agonist kainate
Method: single particle / : Gangwar SP, Yelshanskaya MV, Yen LY, Newton TP, Sobolevsky AI

PDB-9n4o:
Composite map for GluK2-0xNeto2 in the apo state with asymmetric ligand-binding domain
Method: single particle / : Gangwar SP, Yelshanskaya MV, Yen LY, Newton TP, Sobolevsky AI

PDB-9n4p:
Composite map for GluK2-1xNeto2 in the apo state
Method: single particle / : Gangwar SP, Yelshanskaya MV, Yen LY, Newton TP, Sobolevsky AI

PDB-9n4q:
Composite map for GluK2-2xNeto2 in the apo state
Method: single particle / : Gangwar SP, Yelshanskaya MV, Yen LY, Newton TP, Sobolevsky AI

PDB-9n4r:
Composite map for GluK2-0xNeto2 in the open state, in complex with the positive allosteric modulator BPAM344 and agonist kainate
Method: single particle / : Gangwar SP, Yelshanskaya MV, Yen LY, Newton TP, Sobolevsky AI

PDB-9n4s:
Composite map for GluK2-1xNeto2 in the open state, in complex with the positive allosteric modulator BPAM344 and agonist kainate
Method: single particle / : Gangwar SP, Yelshanskaya MV, Yen LY, Newton TP, Sobolevsky AI

PDB-9n4t:
Composite map for GluK2-2xNeto2 in the open state, in complex with the positive allosteric modulator BPAM344 and agonist kainate
Method: single particle / : Gangwar SP, Yelshanskaya MV, Yen LY, Newton TP, Sobolevsky AI

EMDB-48397:
Cryo-EM structure of CRAF/MEK1/14-3-3 complex (autoinhibited conformation)
Method: single particle / : Jang DM, Jeon H, Eck MJ

EMDB-48399:
Cryo-EM structure of CRAF/MEK1 complex (kinase domain)
Method: single particle / : Jang DM, Jeon H, Eck MJ

EMDB-48401:
Cryo-EM structure of CRAF/MEK1/14-3-3 complex (open monomer conformation, CRAF Y340D/Y341D mutant)
Method: single particle / : Jang DM, Jeon H, Eck MJ

EMDB-48402:
Cryo-EM structure of CRAF/MEK1 complex (kinase domain, CRAF Y340D/Y341D mutant)
Method: single particle / : Jang DM, Jeon H, Eck MJ

PDB-9mmp:
Cryo-EM structure of CRAF/MEK1/14-3-3 complex (autoinhibited conformation)
Method: single particle / : Jang DM, Jeon H, Eck MJ

PDB-9mmq:
Cryo-EM structure of CRAF/MEK1 complex (kinase domain)
Method: single particle / : Jang DM, Jeon H, Eck MJ

PDB-9mmr:
Cryo-EM structure of CRAF/MEK1/14-3-3 complex (open monomer conformation, CRAF Y340D/Y341D mutant)
Method: single particle / : Jang DM, Jeon H, Eck MJ

PDB-9mms:
Cryo-EM structure of CRAF/MEK1 complex (kinase domain, CRAF Y340D/Y341D mutant)
Method: single particle / : Jang DM, Jeon H, Eck MJ

EMDB-47547:
Cryo-EM structure of mechanosensitive channel YnaI in DOPC nanodiscs
Method: single particle / : Hiotis G, Will N, Walz T

EMDB-47548:
Cryo-EM structure of mechanosensitive channel YnaI in DOPC nanodiscs treated with beta-cyclodextrin
Method: single particle / : Hiotis G, Will N, Walz T

EMDB-47549:
Cryo-EM structure of mechanosensitive channel YnaI in DOPC nanodiscs treated with lysophosphatidylcholine
Method: single particle / : Hiotis G, Will N, Walz T

EMDB-47550:
Cryo-EM structure of mechanosensitive channel YnaI A155V mutant in conformation 1
Method: single particle / : Hiotis G, Will N, Walz T

EMDB-47551:
Cryo-EM structure of mechanosensitive channel YnaI A155V mutant in conformation 2
Method: single particle / : Hiotis G, Will N, Walz T

EMDB-47552:
Cryo-EM structure of mechanosensitive channel YnaI in DDPC nanodiscs
Method: single particle / : Hiotis G, Will N, Walz T

EMDB-47553:
Cryo-EM structure of MscS/YnaI chimera in DOPC nanodiscs
Method: single particle / : Hiotis G, Will N, Walz T

PDB-9e62:
Cryo-EM structure of mechanosensitive channel YnaI in DOPC nanodiscs
Method: single particle / : Hiotis G, Will N, Walz T

PDB-9e63:
Cryo-EM structure of mechanosensitive channel YnaI in DOPC nanodiscs treated with beta-cyclodextrin
Method: single particle / : Hiotis G, Will N, Walz T

PDB-9e64:
Cryo-EM structure of mechanosensitive channel YnaI in DOPC nanodiscs treated with lysophosphatidylcholine
Method: single particle / : Hiotis G, Will N, Walz T

PDB-9e65:
Cryo-EM structure of mechanosensitive channel YnaI A155V mutant in conformation 1
Method: single particle / : Hiotis G, Will N, Walz T

PDB-9e66:
Cryo-EM structure of mechanosensitive channel YnaI A155V mutant in conformation 2
Method: single particle / : Hiotis G, Will N, Walz T

PDB-9e67:
Cryo-EM structure of mechanosensitive channel YnaI in DDPC nanodiscs
Method: single particle / : Hiotis G, Will N, Walz T

PDB-9e68:
Cryo-EM structure of MscS/YnaI chimera in DOPC nanodiscs
Method: single particle / : Hiotis G, Will N, Walz T

EMDB-51901:
SARS-CoV-2 S protein in complex with pT1679 Fab
Method: single particle / : Hansen G, Benecke T, Vollmer B, Gruenewald K, Krey T

PDB-9h6u:
SARS-CoV-2 S protein in complex with pT1679 Fab
Method: single particle / : Hansen G, Benecke T, Vollmer B, Gruenewald K, Krey T

EMDB-50645:
Single particle cryo-EM maps of AcrB wildtype monomers reconstituted in salipro nanodiscs
Method: single particle / : Lazarova M, Frangakis A, Pos KM

EMDB-50328:
Single particle cryo-EM maps of AcrB wildtype monomer classes in DDM
Method: single particle / : Lazarova M, Boernsen C, Frangakis A, Pos KM

EMDB-50329:
Single particle cryo-EM maps of AcrB V612F monomer classes in DDM
Method: single particle / : Lazarova M, Boernsen C, Frangakis A, Pos KM

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more