[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 9,488 items for (author: jin & m)

EMDB-66732:
Cryo-EM structure of Ceg14 and AnkJ
Method: single particle / : Li Y, Zheng Q, Li S, Wu Y

EMDB-66735:
Cryo-EM structure of Ceg14-AnkJ-Actin complex
Method: single particle / : Li Y, Li S, Zheng Q, Wu Y

EMDB-66822:
Cryo-EM structure of Ceg14 and Actin complex
Method: single particle / : Li Y, Zheng Q, Li S, Wu Y

PDB-9xch:
Cryo-EM structure of Ceg14 and AnkJ
Method: single particle / : Li Y, Zheng Q, Li S

PDB-9xcm:
Cryo-EM structure of Ceg14-AnkJ-Actin complex
Method: single particle / : Li Y, Li S, Zheng Q

PDB-9xfh:
Cryo-EM structure of Ceg14 and Actin complex
Method: single particle / : Li Y, Zheng Q, Li S

EMDB-66860:
Cryo-EM structure of SARS-CoV-2 receptor binding domain in complex with CS-42 Fab (local refinement of RBD and Fv)
Method: single particle / : Kim UJ, Wang DM, Yoon GY, Cho HS

EMDB-66861:
Cryo-EM structure of SARS-CoV-2 receptor binding domain in complex with SR-23 Fab (local refinement of RBD and Fv)
Method: single particle / : Kim UJ, Wang DM, Yoon GY, Cho HS

PDB-9xgw:
Cryo-EM structure of SARS-CoV-2 receptor binding domain in complex with CS-42 Fab (local refinement of RBD and Fv)
Method: single particle / : Kim UJ, Wang DM, Yoon GY, Cho HS

PDB-9xgx:
Cryo-EM structure of SARS-CoV-2 receptor binding domain in complex with SR-23 Fab (local refinement of RBD and Fv)
Method: single particle / : Kim UJ, Wang DM, Yoon GY, Cho HS

EMDB-66969:
human ORAI1 in C6 symmetry
Method: single particle / : Chen L, Wang Y, Zhang Y

EMDB-66970:
human ORAI1 in C2 symmetry
Method: single particle / : Chen L, Wang Y, Zhang Y

EMDB-80823:
Cryo-EM structure of human Ceramide glucosyltransferase UGCG
Method: single particle / : Wu C, Jin S, Xu J, Wang JJ, Guo X, Li Y, Cao Z, Jiang M, Yuan Q, Hu W, Li C, Xu Y, Wang MW, Jiang Y, Xu HE

EMDB-80824:
Cryo-EM structure of human UGCG bound to UDP and C6-ceramide
Method: single particle / : Wu C, Jin S, Xu J, Wang JJ, Guo X, Li Y, Cao Z, Jiang M, Yuan Q, Hu W, Li C, Xu Y, Wang MW, Jiang Y, Xu HE

EMDB-80825:
Cryo-EM structure of human UGCG bound to Eliglustat
Method: single particle / : Wu C, Jin S, Xu J, Wang JJ, Guo X, Li Y, Cao Z, Jiang M, Yuan Q, Hu W, Li C, Xu Y, Wang MW, Jiang Y, Xu HE

EMDB-80826:
Cryo-EM structure of human UGCG bound to Ibiglustat
Method: single particle / : Wu C, Jin S, Xu J, Wang JJ, Guo X, Li Y, Cao Z, Jiang M, Yuan Q, Hu W, Li C, Xu Y, Wang MW, Jiang Y, Xu HE

EMDB-80827:
Cryo-EM structure of human UGCG bound to Miglustat
Method: single particle / : Wu C, Jin S, Xu J, Wang JJ, Guo X, Li Y, Cao Z, Jiang M, Yuan Q, Hu W, Li C, Xu Y, Wang MW, Jiang Y, Xu HE

EMDB-80829:
Cryo-EM structure of human UGCG bound to UDP-glucose and a phospholipid
Method: single particle / : Wu C, Jin S, Xu J, Wang JJ, Guo X, Li Y, Cao Z, Jiang M, Yuan Q, Hu W, Li C, Xu Y, Wang MW, Jiang Y, Xu HE

EMDB-80832:
Cryo-EM structure of human UGCG bound to UDP-Glucose
Method: single particle / : Wu C, Jin S, Xu J, Wang JJ, Guo X, Li Y, Cao Z, Jiang M, Yuan Q, Hu W, Li C, Xu Y, Wang MW, Jiang Y, Xu HE

EMDB-80833:
Cryo-EM structure of human UGCG bound to UDP
Method: single particle / : Wu C, Jin S, Xu J, Wang JJ, Guo X, Li Y, Cao Z, Jiang M, Yuan Q, Hu W, Li C, Xu Y, Wang MW, Jiang Y, Xu HE

PDB-26qf:
Cryo-EM structure of human Ceramide glucosyltransferase UGCG
Method: single particle / : Wu C, Jin S, Xu J, Wang JJ, Guo X, Li Y, Cao Z, Jiang M, Yuan Q, Hu W, Li C, Xu Y, Wang MW, Jiang Y, Xu HE

PDB-26qg:
Cryo-EM structure of human UGCG bound to UDP and C6-ceramide
Method: single particle / : Wu C, Jin S, Xu J, Wang JJ, Guo X, Li Y, Cao Z, Jiang M, Yuan Q, Hu W, Li C, Xu Y, Wang MW, Jiang Y, Xu HE

PDB-26qh:
Cryo-EM structure of human UGCG bound to Eliglustat
Method: single particle / : Wu C, Jin S, Xu J, Wang JJ, Guo X, Li Y, Cao Z, Jiang M, Yuan Q, Hu W, Li C, Xu Y, Wang MW, Jiang Y, Xu HE

PDB-26qi:
Cryo-EM structure of human UGCG bound to Ibiglustat
Method: single particle / : Wu C, Jin S, Xu J, Wang JJ, Guo X, Li Y, Cao Z, Jiang M, Yuan Q, Hu W, Li C, Xu Y, Wang MW, Jiang Y, Xu HE

PDB-26qj:
Cryo-EM structure of human UGCG bound to Miglustat
Method: single particle / : Wu C, Jin S, Xu J, Wang JJ, Guo X, Li Y, Cao Z, Jiang M, Yuan Q, Hu W, Li C, Xu Y, Wang MW, Jiang Y, Xu HE

PDB-26qm:
Cryo-EM structure of human UGCG bound to UDP-glucose and a phospholipid
Method: single particle / : Wu C, Jin S, Xu J, Wang JJ, Guo X, Li Y, Cao Z, Jiang M, Yuan Q, Hu W, Li C, Xu Y, Wang MW, Jiang Y, Xu HE

PDB-26qs:
Cryo-EM structure of human UGCG bound to UDP-Glucose
Method: single particle / : Wu C, Jin S, Xu J, Wang JJ, Guo X, Li Y, Cao Z, Jiang M, Yuan Q, Hu W, Li C, Xu Y, Wang MW, Jiang Y, Xu HE

PDB-26qt:
Cryo-EM structure of human UGCG bound to UDP
Method: single particle / : Wu C, Jin S, Xu J, Wang JJ, Guo X, Li Y, Cao Z, Jiang M, Yuan Q, Hu W, Li C, Xu Y, Wang MW, Jiang Y, Xu HE

EMDB-69160:
YghJ protein zymogen-like autoinhibited state
Method: single particle / : Gu JK, Zhang MH

EMDB-69161:
N-His tagged YghJ protein substrate-accessible state
Method: single particle / : Gu JK, Zhang MH

EMDB-69162:
C-His tagged YghJ protein substrate-accessible state
Method: single particle / : Gu JK, Zhang MH

PDB-23px:
YghJ protein zymogen-like autoinhibited state
Method: single particle / : Gu JK, Zhang MH

PDB-23py:
N-His tagged YghJ protein substrate-accessible state
Method: single particle / : Gu JK, Zhang MH

PDB-23pz:
C-His tagged YghJ protein substrate-accessible state
Method: single particle / : Gu JK, Zhang MH

EMDB-66141:
Cryo-EM structure of the insect sex pheromone receptor ApisOR22-Orco heterocomplex
Method: single particle / : Dong Z, Wang YD, Guan ZY, Wang GR, Yin P

EMDB-66142:
Cryo-EM structure of the insect sex pheromone receptor ApisOR22-Orco heterocomplex bound with nepetalactone in the open state
Method: single particle / : Dong Z, Guan ZY, Wang GR, Yin P

PDB-9wpf:
Cryo-EM structure of the insect sex pheromone receptor ApisOR22-Orco heterocomplex
Method: single particle / : Dong Z, Wang YD, Guan ZY, Wang GR, Yin P

PDB-9wpg:
Cryo-EM structure of the insect sex pheromone receptor ApisOR22-Orco heterocomplex bound with nepetalactone in the open state
Method: single particle / : Dong Z, Guan ZY, Wang GR, Yin P

EMDB-73600:
SARS-CoV-2 SL5 rotated junction
Method: single particle / : Kretsch RC, Xu L, Chiu W, Das R

PDB-9yx9:
SARS-CoV-2 SL5 rotated junction
Method: single particle / : Kretsch RC, Xu L, Chiu W, Das R

EMDB-66140:
Cryo-EM structure of the insect sex pheromone receptor ApisOR22-Orco heterocomplex bound with nepetalactone in the closed state.
Method: single particle / : Dong Z, Wang YD, Guan ZY, Wang GR, Yin P

PDB-9wpe:
Cryo-EM structure of the insect sex pheromone receptor ApisOR22-Orco heterocomplex bound with nepetalactone in the closed state.
Method: single particle / : Dong Z, Wang YD, Guan ZY, Wang GR, Yin P

EMDB-73601:
BtCoV SL5 with SL5c truncated
Method: single particle / : Kretsch RC, Xu L, Chiu W, Das R

PDB-9yxa:
BtCoV SL5 with SL5c truncated
Method: single particle / : Kretsch RC, Xu L, Chiu W, Das R

EMDB-48426:
Cryo-EM local map of six VRC35 Fabs bound to influenza H3N2 Victoria 2011 hemagglutinin head
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Kanekiyo M, Pierson TC, Doria-Rose NA, Kwong PD, Zhou T

EMDB-48427:
Cryo-EM local map of dimeric VRC35 Fabs bound to N-linked glycans N126, N165, and N246 on influenza H3N2 Victoria 2011 hemagglutinin head
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Kanekiyo M, Pierson TC, Doria-Rose NA, Kwong PD, Zhou T

EMDB-49628:
Composite map of three pairs of dimeric VRC36 Fabs bound to HIV-1 BG505.T332N DS-SOSIP.664 Env trimer
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Pierson TC, Doria-Rose NA, Zhou T, Kwong PD

EMDB-49633:
Global map of six VRC36 Fabs bound to HIV-1 BG505.T332N DS-SOSIP.664 Env trimer
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Pierson TC, Doria-Rose NA, Zhou T, Kwong PD

EMDB-74798:
Cryo-EM local density map of VRC35 Fab bound to N-linked glycans on the SARS-CoV-2 LP.8.1.9 spike protein
Method: single particle / : Cheng J, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Pierson TC, Doria-Rose NA, Kwong PD, Zhou T

EMDB-74801:
Cryo-EM map of VRC35 Fab bound to the SARS-CoV-2 LP.8.1.9 spike protein
Method: single particle / : Cheng J, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Pierson TC, Doria-Rose NA, Kwong PD, Zhou T

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more