[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 393 items for (author: ishikawa & i)

EMDB-63392:
The chimeric flagellar motor complex between MotA1B1 from Paenibacillus sp. TCA20 and MotAB from E.coli, state 1

EMDB-63393:
The chimeric flagellar motor complex between MotA1B1 from Paenibacillus sp. TCA20 and MotAB from E.coli, state 2

EMDB-63394:
The chimeric flagellar motor complex between MotA1B1 from Paenibacillus sp. TCA20 and MotAB from E.coli, state 3

PDB-9lu9:
The chimeric flagellar motor complex between MotA1B1 from Paenibacillus sp. TCA20 and MotAB from E.coli, state 1

PDB-9lub:
The chimeric flagellar motor complex between MotA1B1 from Paenibacillus sp. TCA20 and MotAB from E.coli, state 2

PDB-9luc:
The chimeric flagellar motor complex between MotA1B1 from Paenibacillus sp. TCA20 and MotAB from E.coli, state 3

EMDB-39544:
Iota toxin Ib pore serine-clamp mutant

PDB-8yrm:
Iota toxin Ib pore serine-clamp mutant

EMDB-39052:
Cryo-EM structure of AQP3 in DDM micelle

EMDB-39053:
Cryo-EM structure of AQP3 in POPC nanodisc

EMDB-39054:
Cryo-EM structure of AQP3 Y212F in POPC nanodisc

EMDB-39055:
Cryo-EM structure of AQP3 Y212T in POPC nanodisc

EMDB-39056:
Cryo-EM structure of AQP3 Y212T in DDM micelle

EMDB-39057:
Cryo-EM structure of AQP3 in DMPC nanodisc

EMDB-39060:
Cryo-EM structure of AQP7 in POPC nanodisc

EMDB-39061:
Cryo-EM map of GlpF in DDM micelle

EMDB-39062:
Cryo-EM structure of GlpF in POPC nanodisc

EMDB-39063:
Cryo-EM structure of GlpF with P177 deletion in POPC nanodisc

PDB-8y8n:
Cryo-EM structure of AQP3 in DDM micelle

PDB-8y8o:
Cryo-EM structure of AQP3 in POPC nanodisc

PDB-8y8p:
Cryo-EM structure of AQP3 Y212F in POPC nanodisc

PDB-8y8q:
Cryo-EM structure of AQP3 Y212T in POPC nanodisc

PDB-8y8r:
Cryo-EM structure of AQP3 Y212T in DDM micelle

PDB-8y8s:
Cryo-EM structure of AQP3 in DMPC nanodisc

PDB-8y8v:
Cryo-EM structure of AQP7 in POPC nanodisc

PDB-8y8w:
Cryo-EM structure of GlpF in POPC nanodisc

PDB-8y8x:
Cryo-EM structure of GlpF with P177 deletion in POPC nanodisc

EMDB-37489:
Structure of the dPspCas13b-ADAR2-crRNA-target RNA complex

PDB-8wfb:
Structure of the dPspCas13b-ADAR2-crRNA-target RNA complex

EMDB-37488:
Structure of the PspCas13b-crRNA-target RNA complex (State 2)

PDB-8wfa:
Structure of the PspCas13b-crRNA-target RNA complex

EMDB-37487:
Structure of the PspCas13b-crRNA-target RNA complex (State 1)

PDB-8wf9:
Structure of the PspCas13b-crRNA-target RNA complex (State 1)

EMDB-37486:
Structure of the PspCas13b-crRNA complex

PDB-8wf8:
Structure of the PspCas13b-crRNA complex

EMDB-61204:
Cryo-EM Structure of calcium sensing receptor in complex gamma-glutamyl-valyl-glycine as a kokumi substance

PDB-9j7i:
Cryo-EM Structure of calcium sensing receptor in complex gamma-glutamyl-valyl-glycine as a kokumi substance

EMDB-36627:
Cryo-EM structure of the anamorelin-bound ghrelin receptor and Gq complex

PDB-8jsr:
Cryo-EM structure of the anamorelin-bound ghrelin receptor and Gq complex

EMDB-62478:
Cryo-EM structure of human pannexin-3 protomer

EMDB-62526:
Cryo-EM structure of human pannexin-3 heptamer

PDB-9kom:
Cryo-EM structure of human pannexin-3 protomer

PDB-9krg:
Cryo-EM structure of human pannexin-3 heptamer

EMDB-39184:
Cryo-EM structure of SARS-CoV-2 spike ectodomain (HexaPro, Omicron BA.2 variant) in complex with CeSPIACE

EMDB-39185:
Cryo-EM structure of SARS-CoV-2 spike ectodomain (HexaPro, Omicron BA.5 variant) in complex with CeSPIACE, class 1

EMDB-39186:
Cryo-EM structure of SARS-CoV-2 spike ectodomain (HexaPro, Omicron BA.5 variant) in complex with CeSPIACE, class 2

EMDB-60580:
Bacterial flagellar sodium-driven stator PomA5PomB2 with 100 mM NaCl

EMDB-60581:
Bacterial flagellar sodium-driven stator PomA5PomB2 with 100 mM KCl

EMDB-60584:
Bacterial flagellar sodium-driven stator PomA5PomB2(D24N) with 100 mM NaCl

EMDB-60585:
Bacterial flagellar sodium-driven stator PomA5PomB2(D24N) with 100 mM KCl

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more