[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 12,184 items for (author: hua & s)

EMDB-73720:
Mitochondrial Creatine Kinase in complex with uncompetitive inhibitor uci
Method: single particle / : Demir M, Zhao J, Sergienko E

PDB-9z0p:
Mitochondrial Creatine Kinase in complex with uncompetitive inhibitor uci
Method: single particle / : Demir M, Zhao J, Sergienko E

EMDB-57888:
HIV-1 CA hexamer (MX2 bound)
Method: single particle / : Goodale A, DiMaio F, Bergeron JRC

EMDB-57889:
Unbound HIV-1 CA hexamer
Method: single particle / : Goodale A, DiMaio F, Bergeron JRC

EMDB-57890:
HIV-1 capsid tri-hexamer bound to MX2
Method: single particle / : Goodale A, DiMaio F, Bergeron JRC

EMDB-57891:
HIV-1 CA tri-hexamer interface
Method: single particle / : Goodale A, DiMaio F, Bergeron JRC

PDB-30od:
HIV-1 CA hexamer (MX2 bound)
Method: single particle / : Goodale A, DiMaio F, Bergeron JRC

PDB-30oe:
Unbound HIV-1 CA hexamer
Method: single particle / : Goodale A, DiMaio F, Bergeron JRC

PDB-30of:
HIV-1 capsid tri-hexamer bound to MX2
Method: single particle / : Goodale A, DiMaio F, Bergeron JRC

PDB-30og:
HIV-1 CA tri-hexamer interface
Method: single particle / : Goodale A, DiMaio F, Bergeron JRC

EMDB-67848:
Cryo-EM structure of TLP-IPT
Method: helical / : Yan N, Li Z, Wang T

EMDB-67849:
Cryo-EM structure of TLP-4b
Method: helical / : Yan N, Li Z, Wang T

EMDB-67850:
Cryo-EM structure of TLP-3
Method: helical / : Yan N, Li Z, Wang T

EMDB-68122:
Cryo-EM structure of TLP-2
Method: helical / : Yan N, Li Z, Wang T

EMDB-68132:
Cryo-EM structure of TLP-0
Method: helical / : Yan N, Li Z, Wang T

PDB-21nr:
Cryo-EM structure of TLP-IPT
Method: helical / : Yan N, Li Z, Wang T

PDB-21ns:
Cryo-EM structure of TLP-4b
Method: helical / : Yan N, Li Z, Wang T

PDB-21nt:
Cryo-EM structure of TLP-3
Method: helical / : Yan N, Li Z, Wang T

PDB-21zt:
Cryo-EM structure of TLP-2
Method: helical / : Yan N, Li Z, Wang T

PDB-22ag:
Cryo-EM structure of TLP-0
Method: helical / : Yan N, Li Z, Wang T

EMDB-63485:
The consensus map of HBx-Smc5/6 ubiquitination complex
Method: single particle / : Tong C, Lili D, Hongshuai L, Jinhong Z, Qian X, Lanfeng W

EMDB-41497:
Structure of the H-lobe of human MED12
Method: single particle / : Chen SF, Chao TC, Kim HJ, Tang HC, Khadka S, Li T, Murakami K, Boyer TG, Tsai KL

EMDB-41500:
Structure of the kinase and central lobes of human CDK8 kinase module
Method: single particle / : Chen SF, Chao TC, Kim HJ, Tang HC, Khadka S, Li T, Murakami K, Boyer TG, Tsai KL

EMDB-48133:
Cryo-EM local map of 4 VRC35 Fabs bound to HIV-1 BG505 DS-SOSIP.664 Env trimer
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Pierson TC, Doria-Rose NA, Kwong PD, Zhou T

EMDB-48131:
Cryo-EM map of 12 VRC35 Fabs bound to HIV-1 Env trimer
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Pierson TC, Doria-Rose NA, Kwong PD, Zhou T

EMDB-48134:
Cryo-EM local map of 2 VRC35 Fabs bound to HIV-1 BG505 DS-SOSIP.664 Env trimer
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Pierson TC, Doria-Rose NA, Kwong PD, Zhou T

EMDB-77046:
Thermotoga maritima threonylcarbamoyl transfer complex (TsaB2D) in complex with Escherichia coli tRNA(THR)
Method: single particle / : Kutchuashvili A, Swairjo MA

EMDB-77048:
Thermotoga maritima threonylcarbamoyl transfer complex (TsaB2D) in complex with Thermotoga maritima tRNA(LYS)
Method: single particle / : Kutchuashvili A, Swairjo MA

PDB-13fn:
Thermotoga maritima threonylcarbamoyl transfer complex (TsaB2D) in complex with Escherichia coli tRNA(THR)
Method: single particle / : Kutchuashvili A, Swairjo MA

PDB-13fo:
Thermotoga maritima threonylcarbamoyl transfer complex (TsaB2D) in complex with Thermotoga maritima tRNA(LYS)
Method: single particle / : Kutchuashvili A, Swairjo MA

EMDB-73380:
Pr-pr homodimer state of Stigmatella aurantiaca bacteriophytochrome 2
Method: single particle / : Karki P, Stojkovic EA, Schmidt M

EMDB-73612:
Pr-Pfr heterodimer state of Stigmatella aurantiaca bacteriophytochrome 2
Method: single particle / : Karki P, Stojkovic EA, Schmidt M

PDB-9ys3:
Pr-pr homodimer state of Stigmatella aurantiaca bacteriophytochrome 2
Method: single particle / : Karki P, Stojkovic EA, Schmidt M

PDB-9yxn:
Pr-Pfr heterodimer state of Stigmatella aurantiaca bacteriophytochrome 2
Method: single particle / : Karki P, Stojkovic EA, Schmidt M

EMDB-75011:
MP1104-bound Kappa Opioid Receptor in complex with beta-arrestin1
Method: single particle / : Han J, Chen M, Che T

PDB-9zzo:
MP1104-bound Kappa Opioid Receptor in complex with beta-arrestin1
Method: single particle / : Han J, Chen M, Che T

EMDB-55239:
CryoEM structure of transcribing RNA polymerase II elongation complex with ATP and Elf1
Method: single particle / : Yi G, Li Q, Wang D, Zhang P

EMDB-55240:
CryoEM structure of transcribing RNA polymerase II elongation complex with ATP and Elf1_3D classification map containing the complete nucleic acid scaffold
Method: single particle / : Yi G, Li Q, Wang D, Zhang P

PDB-9sv6:
CryoEM structure of transcribing RNA polymerase II elongation complex with ATP and Elf1
Method: single particle / : Yi G, Li Q, Wang D, Zhang P

EMDB-52224:
ROCK2 bound with TDI01
Method: single particle / : Aijia W, Shenghai C, Qinghua L, Yan H, Haohao D, Bisen D

PDB-9hjq:
ROCK2 bound with TDI01
Method: single particle / : Aijia W, Shenghai C, Qinghua L, Yan H, Haohao D, Bisen D

EMDB-65483:
In situ Tspan-7 spiral structure in retraction fiber
Method: helical / : Jia X, Wang DJ, Li XP, Liu N, Yu L, Wang HW

EMDB-73803:
Cryo-EM structure of human Wntless in complex with Wnt5a at 1:1 stoichiometry
Method: single particle / : Ge Y, de Almeida Magalhaes T, Wu H, Wang Z, Salic A, Jiang J, Huang P

EMDB-73810:
Cryo-EM structure of human Wntless in its apo state
Method: single particle / : Ge Y, de Almeida Magalhaes T, Wu H, Yadav GP, Wang Z, Salic A, Jiang J, Huang P

EMDB-73835:
Cryo-EM structure of human Wntless-Wnt5a 2:2 complex - Focused map A
Method: single particle / : Ge Y, de Almeida Magalhaes T, Wu H, Yadav GP, Wang Z, Salic A, Jiang J, Huang P

EMDB-73836:
Cryo-EM structure of human Wntless-Wnt5a 2:2 complex - Focused map B
Method: single particle / : Ge Y, de Almeida Magalhaes T, Wu H, Yadav GP, Wang Z, Salic A, Jiang J, Huang P

EMDB-73837:
Cryo-EM structure of human Wntless-Wnt5a 2:2 complex - Consensus map
Method: single particle / : Ge Y, de Almeida Magalhaes T, Wu H, Yadav GP, Wang Z, Salic A, Jiang J, Huang P

EMDB-73838:
Cryo-EM structure of human Wntless-Wnt5a 2:2 complex - Composite map
Method: single particle / : Ge Y, de Almeida Magalhaes T, Wu H, Yadav GP, Wang Z, Salic A, Jiang J, Huang P

PDB-9z4h:
Cryo-EM structure of human Wntless in complex with Wnt5a at 1:1 stoichiometry
Method: single particle / : Ge Y, de Almeida Magalhaes T, Wu H, Wang Z, Salic A, Jiang J, Huang P

PDB-9z4o:
Cryo-EM structure of human Wntless in its apo state
Method: single particle / : Ge Y, de Almeida Magalhaes T, Wu H, Yadav GP, Wang Z, Salic A, Jiang J, Huang P

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more