[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 216 items for (author: hall & je)

EMDB-53004:
Structure of eIF2B decamer bound to (P)eIF2 alpha and Compound A-(S)
Method: single particle / : Shilliday F, Maia de Oliveira T, Gancedo-Rodrigo M

PDB-9qc6:
Structure of eIF2B decamer bound to (P)eIF2 alpha and Compound A-(S)
Method: single particle / : Shilliday F, Maia de Oliveira T, Gancedo-Rodrigo M

EMDB-68747:
Structure of CXCR4 in complex with a de-novo designed mini-protein antagonist
Method: single particle / : Banerjee R, Ganguly M, Banerjee N, Tiwari D, Muratspahic E, Baker D, Shukla AK

PDB-22xc:
Structure of CXCR4 in complex with a de-novo designed mini-protein antagonist
Method: single particle / : Banerjee R, Ganguly M, Banerjee N, Tiwari D, Muratspahic E, Baker D, Shukla AK

EMDB-55303:
Adenovirus dodecahedron
Method: single particle / : Kabasakal BV, Buzas D, Bufton J, Berger-Schaffitzel C, Berger I

EMDB-55340:
Engineering the ADDomer Nanoparticle Vaccine Scaffold for Improved Assembly and Enhanced Stability.
Method: single particle / : Balchin G, Berger-Schaffitzel C, Berger I

EMDB-55341:
I4 map of CHIMPSELS_S57C full ADDomer.
Method: single particle / : Balchin G, Berger-Schaffitzel C, Berger I

EMDB-55342:
C1 CHIMPSELS_S57C ADDomer map.
Method: single particle / : Balchin G, Berger-Schaffitzel C, Berger I

PDB-9swa:
Adenovirus dodecahedron
Method: single particle / : Kabasakal BV, Buzas D, Bufton J, Berger-Schaffitzel C, Berger I

PDB-9sy5:
Engineering the ADDomer Nanoparticle Vaccine Scaffold for Improved Assembly and Enhanced Stability.
Method: single particle / : Balchin G, Berger-Schaffitzel C, Berger I

EMDB-53260:
Inward-occluded structure of human GABA transporter 3 bound to substrate GABA
Method: single particle / : Mortensen JS, Bavo F, Jensen MH, Pedersen APS, Storm JP, Pape T, Frolund B, Wellendorph P, Shahsavar A

PDB-9qo9:
Inward-occluded structure of human GABA transporter 3 bound to substrate GABA
Method: single particle / : Mortensen JS, Bavo F, Jensen MH, Pedersen APS, Storm JP, Pape T, Frolund B, Wellendorph P, Shahsavar A

EMDB-53259:
Inward-open structure of human GABA transporter 3 bound to selective inhibitor SR-THAP
Method: single particle / : Mortensen JS, Bavo F, Jensen MH, Pedersen APS, Storm JP, Pape T, Frolund B, Wellendorph P, Shahsavar A

PDB-9qo8:
Inward-open structure of human GABA transporter 3 bound to selective inhibitor SR-THAP
Method: single particle / : Mortensen JS, Bavo F, Jensen MH, Pedersen APS, Storm JP, Pape T, Frolund B, Wellendorph P, Shahsavar A

EMDB-52860:
Ku70/80 bound to 147 bp nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-52861:
Ku70/80 bound to 153 bp nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-52879:
Ku70/80 with Ku70 linker and SAP domain bound to a 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-52912:
Ku70/80 bound to a 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-52958:
DNA-PK bound to a 153 bp H2AX nucleosome model 1
Method: single particle / : Hall C, Chaplin AK

EMDB-53025:
DNA-PK bound to 153 bp H2AX nucleosome model 2
Method: single particle / : Hall C, Chaplin A

EMDB-53026:
Ku80 mediated DNA-PK dimer bound to 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

EMDB-53237:
DNA-PK bound to 153 bp H2AX nucleosome with ATPyS
Method: single particle / : Hall C, Chaplin AK

PDB-9igw:
Ku70/80 bound to 147 bp nucleosome
Method: single particle / : Hall C, Chaplin AK

PDB-9igx:
Ku70/80 bound to 153 bp nucleosome
Method: single particle / : Hall C, Chaplin AK

PDB-9q80:
Ku70/80 with Ku70 linker and SAP domain bound to a 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

PDB-9q8x:
Ku70/80 bound to a 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

PDB-9q9f:
DNA-PK bound to a 153 bp H2AX nucleosome model 1
Method: single particle / : Hall C, Chaplin AK

PDB-9qcr:
DNA-PK bound to 153 bp H2AX nucleosome model 2
Method: single particle / : Hall C, Chaplin A

PDB-9qcs:
Ku80 mediated DNA-PK dimer bound to 153 bp H2AX nucleosome
Method: single particle / : Hall C, Chaplin AK

PDB-9qms:
DNA-PK bound to 153 bp H2AX nucleosome with ATPyS
Method: single particle / : Hall C, Chaplin AK

EMDB-52550:
Ku70/80, DNA bound to Polymerase Mu
Method: single particle / : Chaplin AK, Amin H

PDB-9i04:
Ku70/80, DNA bound to Polymerase Mu
Method: single particle / : Chaplin AK, Amin H

EMDB-48424:
CGRP Receptor in complex with dC2_050
Method: single particle / : Cao J, Cary BP, Belousoff MJ, Wootten DL

PDB-9mni:
CGRP Receptor in complex with dC2_050
Method: single particle / : Cao J, Cary BP, Belousoff MJ, Wootten DL

EMDB-44278:
Chimeric flavivirus between BinJV and YFV-17D
Method: single particle / : Bibby S, Jung J, Modhiran N, Watterson D

EMDB-44279:
Chimeric flavivirus between BinJV and YFV-ES504
Method: single particle / : Bibby S, Jung J, Modhiran N, Watterson D

EMDB-44280:
Chimeric flavivirus between BinJV and YFV-17D in complex with 2C9 Fab
Method: single particle / : Bibby S, Jung J, Modhiran N, Watterson D

EMDB-44281:
Chimeric flavivirus between BinJV and YFV-ES504 in complex with 2C9 Fab
Method: single particle / : Bibby S, Jung J, Modhiran N, Watterson D

EMDB-44282:
Chimeric flavivirus between BinJV and YFV-17D in complex with 5A Fab
Method: single particle / : Bibby S, Jung J, Modhiran N, Watterson D

EMDB-44283:
Chimeric flavivirus between BinJV and YFV-ES504 in complex with 5A Fab
Method: single particle / : Bibby S, Jung J, Modhiran N, Watterson D

EMDB-44284:
Chimeric flavivirus between BinJV and YFV-ES504 with YFV-17D DIII
Method: single particle / : Bibby S, Jung J, Modhiran N, Watterson D

EMDB-44285:
Chimeric flavivirus between BinJV and YFV-ES504 with YFV-17D DIII in complex with 2C9 Fab
Method: single particle / : Bibby S, Jung J, Modhiran N, Watterson D

EMDB-44286:
Chimeric flavivirus between BinJV and YFV-Asibi with YFV-17D DIII
Method: single particle / : Bibby S, Jung J, Modhiran N, Watterson D

EMDB-44287:
Chimeric flavivirus between BinJV and YFV-ES504 T380R
Method: single particle / : Bibby S, Jung J, Modhiran N, Watterson D

EMDB-44288:
Envelope protein ASU of YFV-17D in complex with 2C9 Fab
Method: single particle / : Bibby S, James J, Modhiran N, Watterson D

EMDB-44289:
Envelope protein ASU of YFV-ES504 with YFV-17D DIII
Method: single particle / : Bibby S, James J, Modhiran N, Watterson D

EMDB-44290:
Envelope protein ASU of YFV-ES504 with YFV-17D DIII in complex with 2C9 Fab
Method: single particle / : Bibby S, James J, Modhiran N, Watterson D

EMDB-44291:
Envelope protein ASU of YFV-Asibi with YFV-17D DIII
Method: single particle / : Bibby S, James J, Modhiran N, Watterson D

EMDB-44292:
Envelope protein ASU of YFV-ES504 T380R
Method: single particle / : Bibby S, James J, Modhiran N, Watterson D

EMDB-49804:
Chimeric flavivirus between BinJV and YFV-Asibi
Method: single particle / : Bibby S, Jung J, Modhiran N, Watterson D

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more