[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 2,117 items for (author: gil & c)

EMDB-57888:
HIV-1 CA hexamer (MX2 bound)
Method: single particle / : Goodale A, DiMaio F, Bergeron JRC

EMDB-57889:
Unbound HIV-1 CA hexamer
Method: single particle / : Goodale A, DiMaio F, Bergeron JRC

EMDB-57890:
HIV-1 capsid tri-hexamer bound to MX2
Method: single particle / : Goodale A, DiMaio F, Bergeron JRC

EMDB-57891:
HIV-1 CA tri-hexamer interface
Method: single particle / : Goodale A, DiMaio F, Bergeron JRC

PDB-30od:
HIV-1 CA hexamer (MX2 bound)
Method: single particle / : Goodale A, DiMaio F, Bergeron JRC

PDB-30oe:
Unbound HIV-1 CA hexamer
Method: single particle / : Goodale A, DiMaio F, Bergeron JRC

PDB-30of:
HIV-1 capsid tri-hexamer bound to MX2
Method: single particle / : Goodale A, DiMaio F, Bergeron JRC

PDB-30og:
HIV-1 CA tri-hexamer interface
Method: single particle / : Goodale A, DiMaio F, Bergeron JRC

EMDB-54010:
Human Signal Peptidase in complex with artificial Signal Peptide L11
Method: single particle / : Liaci AM, Vismpas D, Skalidis I, Koh FA, Abhay K, Forster GF

EMDB-54011:
Apo Structure of the Human Signal Peptidase
Method: single particle / : Liaci AM, Vismpas D, Skalidis I, Koh FA, Abhay K, Forster GF

PDB-9rjb:
Human Signal Peptidase in complex with artificial Signal Peptide L11
Method: single particle / : Liaci AM, Vismpas D, Skalidis I, Koh FA, Abhay K, Forster GF

PDB-9rjc:
Apo Structure of the Human Signal Peptidase
Method: single particle / : Liaci AM, Vismpas D, Skalidis I, Koh FA, Abhay K, Forster GF

EMDB-54255:
Mammalian AP3 complex on tubular membranes (AP3 centered)
Method: subtomogram averaging / : Kaufman JGG, Tagiltsev G, Briggs JAG, Owen DJ

EMDB-54256:
Mammalian AP3 complex on tubular membranes (ARF1 centered Beta3-ARF1 dimer-Beta3 interface)
Method: subtomogram averaging / : Kaufman JGG, Tagiltsev G, Briggs JAG, Owen DJ

EMDB-54257:
Mammalian AP3 complex on tubular membranes (ARF1 centered Beta3-ARF1 dimer-Delta interface)
Method: subtomogram averaging / : Kaufman JGG, Tagiltsev G, Briggs JAG, Owen DJ

EMDB-54258:
Mammalian AP3 complex on tubular membranes (ARF1 centered Delta-ARF1 dimer-Delta3 interface)
Method: subtomogram averaging / : Kaufman JGG, Tagiltsev G, Briggs JAG, Owen DJ

PDB-9rtw:
Mammalian AP3 complex on tubular membranes (AP3 centered)
Method: subtomogram averaging / : Kaufman JGG, Tagiltsev G, Briggs JAG, Owen DJ

PDB-9rtx:
Mammalian AP3 complex on tubular membranes (ARF1 centered Beta3-ARF1 dimer-Beta3 interface)
Method: subtomogram averaging / : Kaufman JGG, Tagiltsev G, Briggs JAG, Owen DJ

PDB-9rty:
Mammalian AP3 complex on tubular membranes (ARF1 centered Beta3-ARF1 dimer-Delta interface)
Method: subtomogram averaging / : Kaufman JGG, Tagiltsev G, Briggs JAG, Owen DJ

PDB-9rtz:
Mammalian AP3 complex on tubular membranes (ARF1 centered Delta-ARF1 dimer-Delta3 interface)
Method: subtomogram averaging / : Kaufman JGG, Tagiltsev G, Briggs JAG, Owen DJ

EMDB-55043:
CM1-activated gTuRC in complex with nascent alpha-E254D mutant microtubules
Method: single particle / : Llorca O, Serna M, Lopez-Perrote A

EMDB-55044:
CM1-activated gTuRC in complex with nascent wildtype microtubules
Method: single particle / : Llorca O, Serna M, Lopez-Perrote A

PDB-9smx:
CM1-activated gTuRC in complex with nascent alpha-E254D mutant microtubules
Method: single particle / : Llorca O, Serna M, Lopez-Perrote A

EMDB-75662:
STA of Capsid Protein from Gag VLPs derived from NL4.3 Plasmid
Method: subtomogram averaging / : Preece B, Saffarian S

EMDB-52603:
CryoEM structure of the Themis:Grb2 complex with bound ProMacrobody 256
Method: single particle / : Clancy DM, Felix J, Bloch Y, Savvides SN

EMDB-52604:
3D reconstruction of Themis:Grb2:ProMacrobody256 after 3D classification (Class 1)
Method: single particle / : Clancy DM, Felix J, Bloch Y, Savvides SN

EMDB-52605:
3D reconstruction of Themis:Grb2:ProMacrobody256 after 3D classification (Class 2)
Method: single particle / : Clancy DM, Felix J, Bloch Y, Savvides SN

EMDB-52606:
3D reconstruction of Themis:Grb2:ProMacrobody256 after 3D classification (Class 3)
Method: single particle / : Clancy DM, Felix J, Bloch Y, Savvides SN

EMDB-52607:
3D reconstruction of Themis:Grb2:ProMacrobody256 after 3D classification (Class 4)
Method: single particle / : Clancy DM, Felix J, Bloch Y, Savvides SN

EMDB-52608:
CryoEM map of Themis bound to ProMacrobody 256
Method: single particle / : Clancy DM, Felix J, Bloch Y, Savvides SN

EMDB-52609:
3D reconstruction of Themis:ProMacrobody256 after 3D classification (Class 1)
Method: single particle / : Clancy DM, Felix J, Bloch Y, Savvides SN

EMDB-52610:
3D reconstruction of Themis:ProMacrobody256 after 3D classification (Class 2)
Method: single particle / : Clancy DM, Felix J, Bloch Y, Savvides SN

EMDB-52787:
CryoEM structure of the Themis:Grb2 complex with bound ProMacrobody 256, local refinement
Method: single particle / : Clancy DM, Felix J, Bloch Y, Savvides SN

PDB-9i3p:
CryoEM structure of the Themis:Grb2 complex with bound ProMacrobody 256
Method: single particle / : Clancy DM, Felix J, Bloch Y, Savvides SN

PDB-9iaz:
CryoEM structure of the Themis:Grb2 complex with bound ProMacrobody 256, local refinement
Method: single particle / : Clancy DM, Felix J, Bloch Y, Savvides SN

EMDB-74157:
LDLRAD3-vLA1-VLDLR-LA2 in complex with VEEV TC-83 VLPs (ASU)
Method: single particle / : Raju S, Diamond MS

EMDB-74158:
LDLRAD3-vLA1-VLDLR-LA2 in complex with EEEV PE-6 VLPs (ASU)
Method: single particle / : Raju S, Diamond MS

EMDB-74043:
Cryo-EM structure of the engineered vector AAV2.ATX002
Method: single particle / : Betegon M, Byrne LC, Conway JF

EMDB-72906:
Structure of GPR61 bound to inverse agonist compound 15
Method: single particle / : Lees JA, Dias JM, Han S

PDB-9yfu:
Structure of GPR61 bound to inverse agonist compound 15
Method: single particle / : Lees JA, Dias JM, Han S

EMDB-54031:
a5b3 GABAAR bound to Topiramate, GABA, and Mb25 in a desensitized state in saposin nanodiscs
Method: single particle / : Cowgirl J, Lindahl E, Howard RJ

EMDB-54151:
a5b3 GABAAR bound to GABA, and Mb25 in a desensitized state in saposin nanodiscs, topiramate-free
Method: single particle / : Cowgill J, Lindahl E, Howard RJ

PDB-9rl5:
a5b3 GABAAR bound to Topiramate, GABA, and Mb25 in a desensitized state in saposin nanodiscs
Method: single particle / : Cowgirl J, Lindahl E, Howard RJ

PDB-9rpb:
a5b3 GABAAR bound to GABA, and Mb25 in a desensitized state in saposin nanodiscs, topiramate-free
Method: single particle / : Cowgill J, Lindahl E, Howard RJ

EMDB-54430:
Lectin/toxin 2 from Coprinopsis cinerea
Method: single particle / : Cordara G, Ali Ahmad A, Krengel U

PDB-9s11:
Lectin/toxin 2 from Coprinopsis cinerea
Method: single particle / : Cordara G, Krengel U

EMDB-65619:
Globally refined map of odorant-bound mouse class II odorant receptor G protein complex
Method: single particle / : Choi CW, Gil MS, Chio HJ

EMDB-65620:
Receptor-focused map of odorant-bound mouse class II odorant receptor G protein complex
Method: single particle / : Gil MS, Choi CW, Choi HJ

EMDB-65621:
The structure of odorant-bound mouse class II odorant receptor-miniGs complex
Method: single particle / : Choi CW, Gil MS, Choi HJ

PDB-9w45:
The structure of odorant-bound mouse class II odorant receptor-miniGs complex
Method: single particle / : Choi CW, Gil MS, Choi HJ

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more