[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,465 items for (author: gil & c)

EMDB-18990:
CryoEM map of tau PHF sarkosyl-extracted from a human AD patient (associated with in situ tomography)
Method: helical / : Wilkinson MW, Gilbert MAG, Fatima N, Jenkins J, O'Sullivan TJ, Schertel A, Halfon Y, Morrema THJ, Geibel M, Ranson NA, Radford SE, Hoozemans JJM, Frank RAW

EMDB-16825:
Structure of human terminal uridylyltransferase 7 (hTUT7/ZCCHC6)
Method: single particle / : Yi G, Ye M, Gilbert RJ

EMDB-17084:
Structure of human terminal uridylyltransferase 7 (hTUT7/ZCCHC6) bound with pre-let7g miRNA and UTPalphaS
Method: single particle / : Yi G, Ye M, Gilbert RJ

EMDB-17086:
Human terminal uridylyltransferase 7 (TUT7/ZCCHC6) bound with pre-let7g miRNA and Lin28A - complex 1
Method: single particle / : Yi G, Ye M, Gilbert RJ

EMDB-17087:
Human terminal uridylyltransferase 7 (TUT7/ZCCHC6) bound with pre-let7g miRNA and Lin28A - complex 2
Method: single particle / : Yi G, Ye M, Gilbert RJ

EMDB-43144:
MicroED structure of SARS-CoV-2 main protease (MPro/3CLPro) with missing cone eliminated by suspended drop
Method: electron crystallography / : Bu G, Gillman C, Danelius E, Hattne J, Nannenga BL, Gonen T

PDB-8vd7:
MicroED structure of SARS-CoV-2 main protease (MPro/3CLPro) with missing cone eliminated by suspended drop
Method: electron crystallography / : Bu G, Gillman C, Danelius E, Hattne J, Nannenga BL, Gonen T

EMDB-17164:
Structure of human terminal uridylyltransferase 4 (TUT4, ZCCHC11) in complex with pre-let7g miRNA and Lin28A
Method: single particle / : Gilbert RJ, Yi G, Ye M

EMDB-50148:
Tau PHF subtomogram average relating to CS1 extended data Figure 9A
Method: subtomogram averaging / : Jenkins J

EMDB-50152:
Tau PHF subtomogram average relating to CS2 Figure 3i-j.
Method: subtomogram averaging / : Jenkins J

EMDB-50153:
Tau PHF subtomogram average relating to CS3 extended data Figure 9c
Method: subtomogram averaging / : Jenkins J

EMDB-50155:
Tau PHF subtomogram average relating to CS4 extended data Figure 9d
Method: subtomogram averaging / : Jenkins J

EMDB-50156:
Tau PHF subtomogram average relating to CS5 extended data Figure 9b
Method: subtomogram averaging / : Jenkins J

EMDB-50157:
Tau PHF subtomogram average relating to CS6 extended data Figure 9e
Method: subtomogram averaging / : Jenkins J

EMDB-50159:
Tau PHF subtomogram average relating to CS7 extended data Figure 9f
Method: subtomogram averaging / : Jenkins J

EMDB-50160:
Tau PHF subtomogram average relating to LOL1_PHF Figure 4g-h
Method: subtomogram averaging / : Jenkins J

EMDB-50161:
Tau SF subtomogram average relating to LOL1_SF Figure 4g-h
Method: subtomogram averaging / : Jenkins J

EMDB-50162:
Tau SF subtomogram average relating to LOL2_SF Figure 4i-j
Method: subtomogram averaging / : Jenkins J

EMDB-42527:
Pre-fusion Measles virus fusion protein complexed with Fab 77
Method: single particle / : Zyla D, Saphire EO

EMDB-42539:
Structure of the Measles virus Fusion protein in the post-fusion conformation
Method: single particle / : Zyla D, Saphire EO

EMDB-42593:
Structure of the Measles virus Fusion protein in the pre-fusion conformation
Method: single particle / : Zyla D, Saphire EO

EMDB-42595:
Structure of the Measles virus Fusion protein in the pre-fusion conformation with bound [FIP-HRC]2-PEG11
Method: single particle / : Zyla D, Saphire EO

EMDB-43827:
Fab 77-stabilized MeV F ectodomain fragment
Method: single particle / : Zyla D, Saphire EO

PDB-8ut2:
Pre-fusion Measles virus fusion protein complexed with Fab 77
Method: single particle / : Zyla D, Saphire EO

PDB-8utf:
Structure of the Measles virus Fusion protein in the post-fusion conformation
Method: single particle / : Zyla D, Saphire EO

PDB-8uup:
Structure of the Measles virus Fusion protein in the pre-fusion conformation
Method: single particle / : Zyla D, Saphire EO

PDB-8uuq:
Structure of the Measles virus Fusion protein in the pre-fusion conformation with bound [FIP-HRC]2-PEG11
Method: single particle / : Zyla D, Saphire EO

PDB-9at8:
Fab 77-stabilized MeV F ectodomain fragment
Method: single particle / : Zyla D, Saphire EO

EMDB-41041:
Open human HCN1 F186C S264C bound to cAMP, reconstituted in LMNG + SPL
Method: single particle / : Burtscher V, Mount J, Cowgill J, Chang Y, Bickel K, Yuan P, Chanda B

PDB-8t50:
Open human HCN1 F186C S264C bound to cAMP, reconstituted in LMNG + SPL
Method: single particle / : Burtscher V, Mount J, Cowgill J, Chang Y, Bickel K, Yuan P, Chanda B

EMDB-50229:
Cryo-tomogram of FIB-milled vegetatively growing yeast cell with mitochondria
Method: electron tomography / : Wettstein R, Hugener J, Gillet L, Hernandez-Armenta Y, Henggeler A, Xu J, Van Gerwen J, Wollweber F, Arter M, Aebersold R, Beltrao P, Pilhofer M, Matos J

EMDB-50230:
Cryo-tomogram of FIB-milled pre-meiotic yeast cell with mitochondria
Method: electron tomography / : Wettstein R, Hugener J, Gillet L, Hernandez-Armenta Y, Henggeler A, Xu J, Van Gerwen J, Wollweber F, Arter M, Aebersold R, Beltrao P, Pilhofer M, Matos J

EMDB-50231:
Cryo-tomogram of FIB-milled meiotic yeast cell containing mitochondria with filaments
Method: electron tomography / : Wettstein R, Hugener J, Gillet L, Hernandez-Armenta Y, Henggeler A, Xu J, Van Gerwen J, Wollweber F, Arter M, Aebersold R, Beltrao P, Pilhofer M, Matos J

EMDB-50232:
Cryo-tomogram of FIB-milled yeast spore with mitochondria
Method: electron tomography / : Wettstein R, Hugener J, Gillet L, Hernandez-Armenta Y, Henggeler A, Xu J, Van Gerwen J, Wollweber F, Arter M, Aebersold R, Beltrao P, Pilhofer M, Matos J

EMDB-50233:
Cryo-tomogram of FIB-milled meiotic yeast cell containing mitochondria with filament arrays
Method: electron tomography / : Wettstein R, Hugener J, Gillet L, Hernandez-Armenta Y, Henggeler A, Xu J, Van Gerwen J, Wollweber F, Arter M, Aebersold R, Beltrao P, Pilhofer M, Matos J

EMDB-50234:
Cryo-tomogram of purified meiotic yeast mitochondria with Ald4 filaments
Method: electron tomography / : Wettstein R, Hugener J, Gillet L, Hernandez-Armenta Y, Henggeler A, Xu J, Van Gerwen J, Wollweber F, Arter M, Aebersold R, Beltrao P, Pilhofer M, Matos J

EMDB-19929:
Structural basis of D9-THC analog activity at the Cannabinoid 1 receptor
Method: single particle / : Thorsen TS, Kulkarni Y, Boggild A, Drace T, Nissen P, Gajhede M, Boesen T, Kastrup JS, Gloriam D

PDB-9erx:
Structural basis of D9-THC analog activity at the Cannabinoid 1 receptor
Method: single particle / : Thorsen TS, Kulkarni Y, Boggild A, Drace T, Nissen P, Gajhede M, Boesen T, Kastrup JS, Gloriam D

EMDB-18592:
E.coli DNA gyrase in complex with 217 bp substrate DNA and LEI-800
Method: single particle / : Ghilarov D, Martin NI, van der Stelt M

PDB-8qqi:
E.coli DNA gyrase in complex with 217 bp substrate DNA and LEI-800
Method: single particle / : Ghilarov D, Martin NI, van der Stelt M

EMDB-41040:
Human HCN1 F186C S264C C309A bound to cAMP, reconstituted in LMNG + SPL
Method: single particle / : Burtscher V, Mount J, Cowgill J, Chang Y, Bickel K, Yuan P, Chanda B

PDB-8t4y:
Human HCN1 F186C S264C C309A bound to cAMP, reconstituted in LMNG + SPL
Method: single particle / : Burtscher V, Mount J, Cowgill J, Chang Y, Bickel K, Yuan P, Chanda B

EMDB-16375:
SARS-CoV2 Omicron BA.1 RBD in complex with CAB-A17 antibody
Method: single particle / : Das H, Hallberg BM

PDB-8c0y:
SARS-CoV2 Omicron BA.1 RBD in complex with CAB-A17 antibody
Method: single particle / : Das H, Hallberg BM

EMDB-41036:
Closed human HCN1 F186C S264C bound to cAMP, reconstituted in LMNG + SPL
Method: single particle / : Burtscher V, Mount J, Cowgill J, Chang Y, Bickel K, Yuan P, Chanda B

PDB-8t4m:
Closed human HCN1 F186C S264C bound to cAMP, reconstituted in LMNG + SPL
Method: single particle / : Burtscher V, Mount J, Cowgill J, Chang Y, Bickel K, Yuan P, Chanda B

EMDB-42970:
Model and map from local refinement of a CAB-A17 - Omicron Ba.1 spike complex
Method: single particle / : Hallberg BM, Das H

PDB-8v4f:
Model and map from local refinement of a CAB-A17 - Omicron Ba.1 spike complex
Method: single particle / : Hallberg BM, Das H

EMDB-17362:
Homotypic interacting B1 fab bound to Chondroitin Sulfate A
Method: single particle / : Raghavan SSR, Dagil R, Wang KT, Salanti A

EMDB-42430:
Structure of synaptic vesicle protein 2B with padsevonil
Method: single particle / : Martin MF, Mittal A, Levin E, Adams C, Yang M, Ledecq M, Horanyi PS, Coleman JA

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more