[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 76 items for (author: gerard & s)

EMDB-48227:
Structure of zebrafish OTOP1 in nanodisc in complex with inhibitor C2.2
Method: single particle / : Burendei B, Ward AB

EMDB-48234:
Structure of zebrafish OTOP1 in nanodisc in the presence of inhibitor C11
Method: single particle / : Burendei B, Ward AB

EMDB-48235:
Structure of zebrafish OTOP1 in nanodisc in complex with inhibitor C2.36
Method: single particle / : Burendei B, Ward AB

PDB-9mff:
Structure of zebrafish OTOP1 in nanodisc in complex with inhibitor C2.2
Method: single particle / : Burendei B, Ward AB

PDB-9mfl:
Structure of zebrafish OTOP1 in nanodisc in the presence of inhibitor C11
Method: single particle / : Burendei B, Ward AB

PDB-9mfm:
Structure of zebrafish OTOP1 in nanodisc in complex with inhibitor C2.36
Method: single particle / : Burendei B, Ward AB

EMDB-70618:
Cryo-EM structure of the C. neoformans lipid flippase Apt1-Cdc50 bound with butyrolactol A in the E2P state
Method: single particle / : Duan HD, Li H

PDB-9omv:
Cryo-EM structure of the C. neoformans lipid flippase Apt1-Cdc50 bound with butyrolactol A in the E2P state
Method: single particle / : Duan HD, Li H

EMDB-19790:
Restriction on Ku Inward Translocation Caps Telomere Ends
Method: single particle / : Mattarocci S, Baconnais S, Roisne-Hamelin F, Pobiega S, Alibert O, Morin V, Deshayes A, Veaute X, Ropars V, Mazon G, Busso D, Fernandez Varela P, Le Cam E, Charbonnier J, Cuniasse P, Marcand S

EMDB-19811:
Restriction on Ku Inward Translocation Caps Telomere Ends
Method: single particle / : Mattarocci S, Baconnais S, Roisne-Hamelin F, Pobiega S, Alibert O, Morin V, Deshayes A, Veaute X, Ropars V, Mazon G, Busso D, Fernandez Varela P, Le Cam E, Charbonnier J, Cuniasse P, Marcand S

PDB-8s82:
Restriction on Ku Inward Translocation Caps Telomere Ends
Method: single particle / : Mattarocci S, Baconnais S, Roisne-Hamelin F, Pobiega S, Alibert O, Morin V, Deshayes A, Veaute X, Ropars V, Mazon G, Busso D, Fernandez Varela P, Le Cam E, Charbonnier J, Cuniasse P, Marcand S

PDB-8s8p:
Restriction on Ku Inward Translocation Caps Telomere Ends
Method: single particle / : Mattarocci S, Baconnais S, Roisne-Hamelin F, Pobiega S, Alibert O, Morin V, Deshayes A, Veaute X, Ropars V, Mazon G, Busso D, Fernandez Varela P, Le Cam E, Charbonnier J, Cuniasse P, Marcand S

EMDB-47339:
Cryo-EM structure of the C. neoformans lipid flippase Apt1-Cdc50 in the E1 state
Method: single particle / : Duan HD, Li H

PDB-9dzv:
Cryo-EM structure of the C. neoformans lipid flippase Apt1-Cdc50 in the E1 state
Method: single particle / : Duan HD, Li H

EMDB-29883:
CLC-ec1 E202Y at pH 4.5 100mM Cl Turn
Method: single particle / : Fortea E, Lee S, Argyos Y, Chadda R, Ciftci D, Huysmans G, Robertson JL, Boudker O, Accardi A

EMDB-29884:
CLC-ec1 R230C/L249C/C85A at pH 4.5 100mM Cl Swap
Method: single particle / : Fortea E, Lee S, Argyos Y, Chadda R, Ciftci D, Huysmans G, Robertson JL, Boudker O, Accardi A

EMDB-29885:
CLC-ec1 R230C/L249C/C85A at pH 4.5 100mM Cl Turn
Method: single particle / : Fortea E, Lee S, Argyos Y, Chadda R, Ciftci D, Huysmans G, Robertson JL, Boudker O, Accardi A

EMDB-29890:
CLC-ec1 L25C/A450C/C85A at pH 4.5 100mM Cl Intermediate
Method: single particle / : Fortea E, Lee S, Argyos Y, Chadda R, Ciftci D, Huysmans G, Robertson JL, Boudker O, Accardi A

EMDB-29899:
CLC-ec1 L25C/A450C/C85A at pH 4.5 100mM Cl Twist
Method: single particle / : Fortea E, Lee S, Argyos Y, Chadda R, Ciftci D, Huysmans G, Robertson JL, Boudker O, Accardi A

PDB-8ga0:
CLC-ec1 E202Y at pH 4.5 100mM Cl Turn
Method: single particle / : Fortea E, Lee S, Argyos Y, Chadda R, Ciftci D, Huysmans G, Robertson JL, Boudker O, Accardi A

PDB-8ga1:
CLC-ec1 R230C/L249C/C85A at pH 4.5 100mM Cl Swap
Method: single particle / : Fortea E, Lee S, Argyos Y, Chadda R, Ciftci D, Huysmans G, Robertson JL, Boudker O, Accardi A

PDB-8ga3:
CLC-ec1 R230C/L249C/C85A at pH 4.5 100mM Cl Turn
Method: single particle / : Fortea E, Lee S, Argyos Y, Chadda R, Ciftci D, Huysmans G, Robertson JL, Boudker O, Accardi A

PDB-8ga5:
CLC-ec1 L25C/A450C/C85A at pH 4.5 100mM Cl Intermediate
Method: single particle / : Fortea E, Lee S, Argyos Y, Chadda R, Ciftci D, Huysmans G, Robertson JL, Boudker O, Accardi A

PDB-8gah:
CLC-ec1 L25C/A450C/C85A at pH 4.5 100mM Cl Twist
Method: single particle / : Fortea E, Lee S, Argyos Y, Chadda R, Ciftci D, Huysmans G, Robertson JL, Boudker O, Accardi A

EMDB-28013:
Cryo-EM structure of the Glutaminase C core filament (fGAC)
Method: single particle / : Ambrosio AL, Dias SM, Quesnay JE, Portugal RV, Cassago A, van Heel MG, Islam Z, Rodrigues CT

PDB-8ec6:
Cryo-EM structure of the Glutaminase C core filament (fGAC)
Method: single particle / : Ambrosio AL, Dias SM, Quesnay JE, Portugal RV, Cassago A, van Heel MG, Islam Z, Rodrigues CT

EMDB-30881:
Human Pannexin1 channel
Method: single particle / : Zhang SS, Yang MJ

EMDB-30880:
Human Pannexin1 model
Method: single particle / : Zhang SS, Yang MJ

EMDB-31025:
Phenix sharpen map of a membrane ion channel
Method: single particle / : Zhang SS

PDB-7dwb:
Human Pannexin1 model
Method: single particle / : Zhang SS, Yang MJ

EMDB-10239:
Structure of the native full-length HIV-1 capsid protein A92E in helical assembly (-12,11)
Method: helical / : Ni T, Gerard S

EMDB-10240:
Structure of the native full-length HIV-1 capsid protein A92E in helical assembly (-13,11)
Method: helical / : Ni T, Gerard S

EMDB-10246:
Structure of the native full-length HIV-1 capsid protein in helical assembly (-13,12)
Method: helical / : Ni T, Gerard S

PDB-6slq:
Structure of the native full-length HIV-1 capsid protein A92E in helical assembly (-12,11)
Method: helical / : Ni T, Gerard S, Zhao G, Ning J, Zhang P

PDB-6slu:
Structure of the native full-length HIV-1 capsid protein A92E in helical assembly (-13,11)
Method: helical / : Ni T, Gerard S, Zhao G, Ning J, Zhang P

PDB-6smu:
Structure of the native full-length HIV-1 capsid protein in helical assembly (-13,12)
Method: helical / : Ni T, Gerard S, Zhao G, Ning J, Zhang P

EMDB-10226:
Structure of the native full-length HIV-1 capsid protein in helical assembly (-13,8)
Method: helical / : Ni T, Gerard S

EMDB-10228:
Structure of the native full-length HIV-1 capsid protein A92E in helical assembly (-13,12)
Method: helical / : Ni T, Gerard S

EMDB-10229:
Structure of the native full-length HIV-1 capsid protein in helical assembly (-13,8)
Method: helical / : Ni T, Gerard S

PDB-6skk:
Structure of the native full-length HIV-1 capsid protein in helical assembly (-13,8)
Method: helical / : Ni T, Gerard S, Zhao G, Ning J, Zhang P

PDB-6skm:
Structure of the native full-length HIV-1 capsid protein A92E in helical assembly (-13,12)
Method: helical / : Ni T, Gerard S, Zhao G, Ning J, Zhang P

PDB-6skn:
Structure of the native full-length HIV-1 capsid protein in helical assembly (-13,8)
Method: helical / : Ni T, Gerard S, Zhao G, Ning J, Zhang P

EMDB-10738:
Structure of the native full-length HIV-1 capsid protein in complex with Cyclophilin A from helical assembly (-8,13)
Method: single particle / : Ni T, Gerard S

EMDB-10739:
Structure of the native full-length HIV-1 capsid protein in complex with Cyclophilin A from helical assembly (-13,8)
Method: single particle / : Ni T, Gerard S

EMDB-10740:
Structure of the native full-length HIV-1 capsid protein in complex with Cyclophilin A from helical assembly (-13,7)
Method: single particle / : Ni T, Gerard S

EMDB-10741:
Structure of the native full-length HIV-1 capsid protein in complex with Cyclophilin A from helical assembly (-7,13)
Method: single particle / : Ni T, Gerard S

EMDB-10742:
Structure of the native full-length HIV-1 capsid protein in complex with Cyclophilin A from helical assembly (-13,9)
Method: single particle / : Ni T, Gerard S

EMDB-11176:
Structure of the native full-length HIV-1 capsid protein in complex with Cyclophilin A from helical assembly (-13,10)
Method: single particle / : Ni T, Gerard S

PDB-6y9v:
Structure of the native full-length HIV-1 capsid protein in complex with Cyclophilin A from helical assembly (-8,13)
Method: single particle / : Ni T, Gerard S, Zhao G, Ning J, Zhang P

PDB-6y9w:
Structure of the native full-length HIV-1 capsid protein in complex with Cyclophilin A from helical assembly (-13,8)
Method: single particle / : Ni T, Gerard S, Zhao G, Ning J, Zhang P

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more