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Showing 1 - 50 of 113 items for (author: cruz & ve)

EMDB-54637: 
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in intermediate state (AP*)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-54638: 
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in initial hybrid state (H1)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-54639: 
Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in open state (open COX1-mtRNC-OXA1L/MITRAC)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-54640: 
Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in closed state (closed COX1-mtRNC-OXA1L/MITRAC)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-55836: 
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with peptidyl-tRNA (P)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-55837: 
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in classical pre-translocation state (AP)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-55838: 
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in late hybrid state (H2)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

PDB-9s7b: 
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in intermediate state (AP*)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

PDB-9s7c: 
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in initial hybrid state (H1)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

PDB-9s7d: 
Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in open state (open COX1-mtRNC-OXA1L/MITRAC)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

PDB-9s7e: 
Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in closed state (closed COX1-mtRNC-OXA1L/MITRAC)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-48420: 
Human 80S ribosome bound to small molecule SW393071
Method: single particle / : Erzberger JP, Cruz VE

EMDB-49941: 
Cryo-EM structure of NVL bound the the MM927 inhibitor
Method: single particle / : Cruz VE, Erzberger JP

EMDB-74113: 
Competition for different elements of the nucleosome acidic patch yields distinct functional outcomes. VHH 1B2
Method: single particle / : Chakraborty U, Saccone EC, Becerra GC, Khan LF, Arslanovic N, Aguilar R, Gloor SL, Hunt SR, Folkwein HJ, Husby NL, Maier KE, Marunde MR, Schomburg NK, Vaidya A, Cowles MW, Venters BJ, Kassavetis G, Sun ZW, Kadonaga JT, Armache JP, Keogh MC, Tyler JK

EMDB-74114: 
Competition for different elements of the nucleosome acidic patch yields distinct functional outcomes. VHH 1G1
Method: single particle / : Chakraborty U, Saccone EC, Becerra GC, Khan LF, Arslanovic N, Aguilar R, Gloor SL, Hunt SR, Folkwein HJ, Husby NL, Maier KE, Marunde MR, Schomburg NK, Vaidya A, Cowles MW, Venters BJ, Kassavetis G, Sun ZW, Kadonaga JT, Armache JP, Keogh MC, Tyler JK

PDB-9zen: 
Competition for different elements of the nucleosome acidic patch yields distinct functional outcomes. VHH 1B2
Method: single particle / : Chakraborty U, Saccone EC, Becerra GC, Khan LF, Arslanovic N, Aguilar R, Gloor SL, Hunt SR, Folkwein HJ, Husby NL, Maier KE, Marunde MR, Schomburg NK, Vaidya A, Cowles MW, Venters BJ, Kassavetis G, Sun ZW, Kadonaga JT, Armache JP, Keogh MC, Tyler JK

PDB-9zeo: 
Competition for different elements of the nucleosome acidic patch yields distinct functional outcomes. VHH 1G1
Method: single particle / : Chakraborty U, Saccone EC, Becerra GC, Khan LF, Arslanovic N, Aguilar R, Gloor SL, Hunt SR, Folkwein HJ, Husby NL, Maier KE, Marunde MR, Schomburg NK, Vaidya A, Cowles MW, Venters BJ, Kassavetis G, Sun ZW, Kadonaga JT, Armache JP, Keogh MC, Tyler JK

EMDB-44633: 
Cryo-EM structure of apo NVL
Method: single particle / : Cruz VE, Erzberger JP

EMDB-44634: 
Cryo-EM structure of NVL bound the the MM017 inhibitor
Method: single particle / : Cruz VE, Erzberger JP

EMDB-49911: 
LmuA_conformation 1
Method: single particle / : Chakravarti A, Zhang Z

EMDB-49915: 
LmuA_conformation 2_assymetric
Method: single particle / : Chakravarti A, Zhang Z

EMDB-49922: 
LmuABC_apo
Method: single particle / : Chakravarti A, Zhang Z

EMDB-49934: 
LmuABC-DNA
Method: single particle / : Chakravarti A, Zhang Z

PDB-9nxx: 
LmuA_conformation 1
Method: single particle / : Chakravarti A, Zhang Z

PDB-9ny1: 
LmuA_conformation 2_assymetric
Method: single particle / : Chakravarti A, Zhang Z

PDB-9ny5: 
LmuABC_apo
Method: single particle / : Chakravarti A, Zhang Z

PDB-9nyg: 
LmuABC-DNA
Method: single particle / : Chakravarti A, Zhang Z

EMDB-46536: 
Two Dsup molecules in complex with the nucleosome open from both sides
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

EMDB-46537: 
Two Dsup molecules in complex with the nucleosome open from the left side
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

EMDB-46538: 
Two HMGN2s in complex with the nucleosome
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

EMDB-46539: 
Two HMGN5s in complex with the nucleosome
Method: single particle / : Alegrio-Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

EMDB-46540: 
167-bp 5S rDNA nucleosome cross-linked with glutaraldehyde
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

EMDB-46541: 
167-bp 5S rDNA nucleosome cross-linked with formaldehyde (stretched due to preferential views but relevant for assessing DNA flexibility)
Method: single particle / : Alegrio-Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

EMDB-46542: 
167-bp 5S rDNA nucleosome - closed
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

EMDB-46543: 
167-bp 5S rDNA nucleosome - open I (open only on the downstream side)
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

EMDB-46544: 
167-bp 5S rDNA nucleosome - open II
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

EMDB-46545: 
147-bp 5S rDNA nucleosome - closed
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

EMDB-46546: 
147-bp 5S rDNA nucleosome - open I (open on the downstream side)
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

EMDB-46547: 
147-bp 5S rDNA nucleosome cross-linked with glutaraldehyde
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

PDB-9d3k: 
Two Dsup molecules in complex with the nucleosome open from both sides
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

PDB-9d3l: 
Two Dsup molecules in complex with the nucleosome open from the left side
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

PDB-9d3m: 
Two HMGN2s in complex with the nucleosome
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

PDB-9d3n: 
167-bp 5S rDNA nucleosome cross-linked with glutaraldehyde
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

PDB-9d3o: 
167-bp 5S rDNA nucleosome - closed
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

PDB-9d3p: 
167-bp 5S rDNA nucleosome - open I (open only on the downstream side)
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

PDB-9d3q: 
167-bp 5S rDNA nucleosome - open II
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

PDB-9d3r: 
147-bp 5S rDNA nucleosome - closed
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

PDB-9d3s: 
147-bp 5S rDNA nucleosome - open I (open on the downstream side)
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

PDB-9d3t: 
147-bp 5S rDNA nucleosome cross-linked with glutaraldehyde
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

EMDB-45170: 
Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.
Method: single particle / : Erzberger JP, Cruz VE
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