[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 209 items for (author: craig & ta)

EMDB-49393:
In-situ cryo-EM structure of outer membrane cap (OMC) of the Dot/Icm machine
Method: single particle / : Yue J, Jun L

EMDB-49394:
In-situ cryo-EM structure of periplasmic ring (PR) of the Dot/Icm machine
Method: single particle / : Yue J, Jun L

EMDB-49395:
In-situ cryo-EM structure of Dome of the Dot/Icm machine
Method: single particle / : Yue J, Liu J

EMDB-49396:
In-situ cryo-EM structure of protochannel of the Dot/Icm machine
Method: single particle / : Yue J, Liu J

EMDB-49398:
In-situ cryo-EM structure of PR and DotA-IcmX of the Dot/Icm machine at C1
Method: single particle / : Yue J, Liu J

EMDB-49399:
In-situ cryo-EM structure of porinI of the Dot/Icm machine
Method: single particle / : Yue J, Liu J

PDB-9ngu:
In situ cryo-EM structure of outer membrane cap (OMC) of the Legionella Dot/Icm T4SS machine
Method: single particle / : Yue J, Jun L

PDB-9ngv:
In situ cryo-EM structure of periplasmic ring (PR) of the Legionella Dot/Icm T4SS machine.
Method: single particle / : Yue J, Jun L

PDB-9ngw:
In-situ cryo-EM structure of Dome of the Legionella Dot/Icm machine
Method: single particle / : Yue J, Liu J

PDB-9ngy:
In situ cryo-EM structure of protochannel (DotA-IcmX) of the Legionella Dot/Icm T4SS machine
Method: single particle / : Yue J, Liu J

PDB-9nh0:
In situ cryo-EM structure of PR and DotA-IcmX of the Legionella Dot/Icm T4SS machine at C1 symmetry
Method: single particle / : Yue J, Liu J

PDB-9nh1:
In situ cryo-EM structure of porin I of the Legionella Dot/Icm T4SS machine
Method: single particle / : Yue J, Liu J

PDB-9nh2:
In situ cryo-EM structure of porin III of the Legionella Dot/Icm T4SS machine
Method: single particle / : Yue J, Liu J

EMDB-48650:
Structure of HKU5 spike C-terminal domain in complex with ACE2 from Pipistrellus abramus
Method: single particle / : Li N, Tsybovsky Y, Teng I, Zhou T

PDB-9mv0:
Structure of HKU5 spike C-terminal domain in complex with ACE2 from Pipistrellus abramus
Method: single particle / : Li N, Tsybovsky Y, Teng I, Zhou T

EMDB-44962:
Tetrameric Complex of full-length HIV-1 integrase protein bound to the integrase binding domain of LEDGF/p75
Method: single particle / : Jing T, Shan Z, Lyumkis D, Biswas A

EMDB-45103:
Consensus map of NL4-3 WT HIV-1 intasome
Method: single particle / : Lyumkis D, Jing T, Zhang Z

EMDB-45104:
Top half of NL4-3 WT HIV-1 intasome
Method: single particle / : Lyumkis D, Jing T, Zhang Z

EMDB-45150:
Bottom half of NL4-3 WT HIV-1 intasome
Method: single particle / : Lyumkis D, Jing T, Zhang Z

EMDB-45151:
Hexadecamer of NL4-3 WT HIV-1 intasome
Method: single particle / : Lyumkis D, Jing T, Zhang Z, Biswas A

PDB-9bw9:
Tetrameric Complex of full-length HIV-1 integrase protein bound to the integrase binding domain of LEDGF/p75
Method: single particle / : Jing T, Shan Z, Lyumkis D, Biswas A

PDB-9c29:
Hexadecamer of NL4-3 WT HIV-1 intasome
Method: single particle / : Lyumkis D, Jing T, Zhang Z

EMDB-70530:
Tetrameric full-length HIV-1 integrase protein complex
Method: single particle / : Jing T, Lyumkis D, Shan Z

EMDB-45448:
Double-stacked pore and prepore-like complex (C1 symmetry)
Method: single particle / : Johnstone BA, Christie MP, Morton CJ, Brown HG, Hanssen E, Parker MW

EMDB-45449:
Double-stacked pore and prepore-like complex (C30 symmetry)
Method: single particle / : Johnstone BA, Christie MP, Morton CJ, Brown HG, Hanssen E, Parker MW

EMDB-45450:
EaCDCL pore complex (C1 symmetry)
Method: single particle / : Johnstone BA, Christie MP, Morton CJ, Brown HG, Hanssen E, Parker MW

EMDB-45451:
Cryo-EM structure of the EaCDCL pore
Method: single particle / : Johnstone BA, Christie MP, Morton CM, Brown HG, Hanssen E, Parker MW

EMDB-45452:
Prepore-like EaCDCL short oligomer (C1 symmetry)
Method: single particle / : Johnstone BA, Christie MP, Morton CJ, Brown HG, Hanssen E, Parker MW

EMDB-45453:
Cryo-EM structure of the prepore-like EaCDCL short oligomer
Method: single particle / : Johnstone BA, Christie MP, Morton CM, Brown HG, Hanssen E, Parker MW

EMDB-45454:
EaCDCL pore complex, non-stacked control (C1)
Method: single particle / : Johnstone BA, Christie MP, Morton CJ, Brown HG, Hanssen E, Parker MW

EMDB-45455:
EaCDCL pore complex, non-stacked control (C30 symmetry)
Method: single particle / : Johnstone BA, Christie MP, Morton CJ, Brown HG, Hanssen E, Parker MW

PDB-9ccp:
Cryo-EM structure of the EaCDCL pore
Method: single particle / : Johnstone BA, Christie MP, Morton CM, Brown HG, Hanssen E, Parker MW

PDB-9ccq:
Cryo-EM structure of the prepore-like EaCDCL short oligomer
Method: single particle / : Johnstone BA, Christie MP, Morton CM, Brown HG, Hanssen E, Parker MW

EMDB-47823:
Structure of the prefusion HKU5-19s Spike trimer (conformation 1)
Method: single particle / : Park YJ, Gen R, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-48048:
Structure of the prefusion HKU5-19s Spike trimer (conformation 2)
Method: single particle / : Park YJ, Gen R, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-9ea0:
Structure of the prefusion HKU5-19s Spike trimer (conformation 1)
Method: single particle / : Park YJ, Gen R, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-9eh8:
Structure of the prefusion HKU5-19s Spike trimer (conformation 2)
Method: single particle / : Park YJ, Gen R, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-46512:
Structure of the HKU5 RBD bound to the P. abramus ACE2 receptor
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-47358:
Structure of the HKU5-19s RBD bound to the Bos taurus ACE2 receptor
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-9d32:
Structure of the HKU5 RBD bound to the P. abramus ACE2 receptor
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-9e0i:
Structure of the HKU5-19s RBD bound to the Bos taurus ACE2 receptor
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-47577:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV NTD-I53-50 in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

EMDB-47580:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV S-2P in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

EMDB-47583:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV S-2P in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

EMDB-47584:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV S-2P-I53-50 in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

EMDB-47585:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV S-2P-I53-50 in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

EMDB-47586:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV S-2P-T33_dn10 in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

EMDB-47587:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV S-2P-T33_dn10 in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

EMDB-47588:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV RBD-I53-50 in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

EMDB-47589:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV RBD-I53-50 in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more