[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 6,656 items for (author: chen & p)

EMDB-45962:
Cryo-EM structure of Tulane virus 9-6-17 variant capsid protein VP1 5-12-18
Method: single particle / : Sun C, Jiang W

EMDB-45963:
Cryo-EM structure of Tulane virus 9-6-17 variant capsid protein VP1 9-14-18
Method: single particle / : Sun C, Jiang W

EMDB-45964:
Cryo-EM structure of Tulane virus 9-6-17 variant capsid protein VP1 9-14-18, DTT-treated
Method: single particle / : Sun C, Jiang W

EMDB-41542:
Polyclonal immune complex of Fab binding the H2 HA from serum of subject 3-3 at week 4
Method: single particle / : Yang YR, Han J, Richey ST, Ward AB

EMDB-60099:
SARS-CoV-2 spike trimer (6P) in complex with two R1-26 Fabs
Method: single particle / : Yan Q, Gao X, Liu B, Hou R, He P, Li Z, Chen Q, Wang J, He J, Chen L, Zhao J, Xiong X

EMDB-60100:
SARS-CoV-2 spike trimer (6P) in complex with three R1-26 Fabs
Method: single particle / : Yan Q, Gao X, Liu B, Hou R, He P, Li Z, Chen Q, Wang J, He J, Chen L, Zhao J, Xiong X

EMDB-60101:
SARS-CoV-2 spike trimer (6P) in complex with R1-26 Fab, head-to-head aggregate
Method: single particle / : Yan Q, Gao X, Liu B, Hou R, He P, Li Z, Chen Q, Wang J, He J, Chen L, Zhao J, Xiong X

EMDB-60102:
SARS-CoV-2 spike trimer (6P) in complex with R1-26 Fab, focused refinement of RBD-Fab region
Method: single particle / : Yan Q, Gao X, Liu B, Hou R, He P, Li Z, Chen Q, Wang J, He J, Chen L, Zhao J, Xiong X

EMDB-60103:
SARS-CoV-2 spike trimer (6P) in complex with two H18 Fabs
Method: single particle / : Yan Q, Gao X, Liu B, Hou R, He P, Li Z, Chen Q, Wang J, He J, Chen L, Zhao J, Xiong X

EMDB-60104:
SARS-CoV-2 spike trimer (6P) in complex with three H18 Fabs
Method: single particle / : Yan Q, Gao X, Liu B, Hou R, He P, Li Z, Chen Q, Wang J, He J, Chen L, Zhao J, Xiong X

EMDB-60105:
SARS-CoV-2 spike trimer (6P) in complex with three H18 Fabs, head-to-head aggregate (C1 symmetry)
Method: single particle / : Yan Q, Gao X, Liu B, Hou R, He P, Li Z, Chen Q, Wang J, He J, Chen L, Zhao J, Xiong X

EMDB-60106:
SARS-CoV-2 spike trimer (6P) in complex with three H18 Fabs, head-to-head aggregate (C3 symmetry)
Method: single particle / : Yan Q, Gao X, Liu B, Hou R, He P, Li Z, Chen Q, Wang J, He J, Chen L, Zhao J, Xiong X

EMDB-60107:
SARS-CoV-2 spike trimer (6P) in complex with two H18 and two R1-32 Fabs
Method: single particle / : Yan Q, Gao X, Liu B, Hou R, He P, Li Z, Chen Q, Wang J, He J, Chen L, Zhao J, Xiong X

EMDB-60108:
SARS-CoV-2 spike trimer (6P) in complex with three H18 and three R1-32 Fabs
Method: single particle / : Yan Q, Gao X, Liu B, Hou R, He P, Li Z, Chen Q, Wang J, He J, Chen L, Zhao J, Xiong X

EMDB-60109:
SARS-CoV-2 spike trimer (6P) in complex with three H18 and three R1-32 Fabs (one RBD rotated)
Method: single particle / : Yan Q, Gao X, Liu B, Hou R, He P, Li Z, Chen Q, Wang J, He J, Chen L, Zhao J, Xiong X

EMDB-60110:
SARS-CoV-2 S1 in complex with H18 and R1-32 Fab
Method: single particle / : Yan Q, Gao X, Liu B, Hou R, He P, Li Z, Chen Q, Wang J, He J, Chen L, Zhao J, Xiong X

EMDB-60111:
Dimer of SARS-CoV-2 S1 in complex with H18 and R1-32 Fabs
Method: single particle / : Yan Q, Gao X, Liu B, Hou R, He P, Li Z, Chen Q, Wang J, He J, Chen L, Zhao J, Xiong X

EMDB-38845:
Icosahedrally averaged cryo-EM reconstruction of PhiKZ capsid before applying the "block-based" reconstruction method
Method: single particle / : Yang Y, Shao Q, Guo M, Han L, Zhao X, Wang A, Li X, Wang B, Pan J, Chen Z, Fokine A, Sun L, Fang Q

EMDB-38846:
Block 1 of PhiKZ capsid
Method: single particle / : Yang Y, Shao Q, Guo M, Han L, Zhao X, Wang A, Li X, Wang B, Pan J, Chen Z, Fokine A, Sun L, Fang Q

EMDB-38848:
Block 2 of PhiKZ capsid
Method: single particle / : Yang Y, Shao Q, Guo M, Han L, Zhao X, Wang A, Li X, Wang B, Pan J, Chen Z, Fokine A, Sun L, Fang Q

EMDB-39002:
Composite cryo-EM map of PhiKZ capsid after applying the "block-based" reconstruction method
Method: single particle / : Yang Y, Shao Q, Guo M, Han L, Zhao X, Wang A, Li X, Wang B, Pan J, Chen Z, Fokine A, Sun L, Fang Q

PDB-8y6v:
Near-atomic structure of icosahedrally averaged jumbo bacteriophage PhiKZ capsid
Method: single particle / : Yang Y, Shao Q, Guo M, Han L, Zhao X, Wang A, Li X, Wang B, Pan J, Chen Z, Fokine A, Sun L, Fang Q

EMDB-44246:
Cryo-EM structure of HIV-1 JRFL v6 Env in complex with vaccine-elicited, Membrane Proximal External Region (MPER) directed antibody DH1317.4.
Method: single particle / : Acharya P, Parsons R, Janowska K, Williams WB, Alam M, Haynes BF

EMDB-41854:
Structure of Human Mitochondrial Chaperonin V72I Mutant
Method: single particle / : Chen L, Wang J

PDB-8u39:
Structure of Human Mitochondrial Chaperonin V72I mutant
Method: single particle / : Chen L, Wang J

EMDB-37139:
Structure of SARS-CoV Spike protein complexed with antibody PW5-5
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37143:
The local refined map of SARS-CoV-2 XBB Variant Spike protein complexed with antibody PW5-535
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37144:
Trimer state of SARS-CoV Spike protein complexed with antibody PW5-535
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37145:
The local refined map of SARS-CoV Spike protein complexed with antibody PW5-5
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37160:
Monomer state of SARS-CoV-2 XBB Variant Spike protein trimer complexed with antibody PW5-5
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37161:
Monomer state of SARS-CoV Spike protein complexed with antibody PW5-535
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37162:
Structure of SARS-CoV-2 Omicron BA.1 Spike complexed with antibody PW5-570
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37163:
The local refined map of SARS-CoV-2 Omicron BA.1 Spike complexed with antibody PW5-570
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37164:
State 1 of SARS-CoV-2 XBB Variant Spike protein trimer complexed with antibody PW5-5
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37165:
Structure of SARS-CoV-2 XBB Variant Spike protein complexed with broadly neutralizing antibody PW5-535
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8kdm:
Structure of SARS-CoV Spike protein complexed with antibody PW5-5
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8kdr:
The local refined map of SARS-CoV-2 XBB Variant Spike protein complexed with antibody PW5-535
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8kds:
Trimer state of SARS-CoV Spike protein complexed with antibody PW5-535
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8kdt:
The local refined map of SARS-CoV Spike protein complexed with antibody PW5-5
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8kej:
Monomer state of SARS-CoV-2 XBB Variant Spike protein trimer complexed with antibody PW5-5
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8kek:
Monomer state of SARS-CoV Spike protein complexed with antibody PW5-535
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8keo:
Structure of SARS-CoV-2 Omicron BA.1 Spike complexed with antibody PW5-570
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8kep:
The local refined map of SARS-CoV-2 Omicron BA.1 Spike complexed with antibody PW5-570
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8keq:
State 1 of SARS-CoV-2 XBB Variant Spike protein trimer complexed with antibody PW5-5
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8ker:
Structure of SARS-CoV-2 XBB Variant Spike protein complexed with broadly neutralizing antibody PW5-535
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-41849:
Structure of 310-18A5 Fab in complex with A/Solomon Islands/3/2006(H1N1) influenza virus hemagglutinin
Method: single particle / : Lei R, Wu NC

EMDB-17696:
Structure of human 48S translation initiation complex in open codon scanning state (48S-1)
Method: single particle / : Petrychenko V, Yi SH, Liedtke D, Peng BZ, Rodnina MV, Fischer N

EMDB-17697:
Structure of human 48S translation initiation complex in AUG recognition state after eIF5-induced GTP hydrolysis by eIF2 (48S-2)
Method: single particle / : Petrychenko V, Yi SH, Liedtke D, Peng BZ, Rodnina MV, Fischer N

EMDB-17698:
Structure of human 48S translation initiation complex upon transfer of initiator tRNA to eIF5B (48S-3)
Method: single particle / : Petrychenko V, Yi SH, Liedtke D, Peng BZ, Rodnina MV, Fischer N

EMDB-17699:
Structure of human 48S translation initiation complex after eIF5 release (48S-4)
Method: single particle / : Petrychenko V, Yi SH, Liedtke D, Peng BZ, Rodnina MV, Fischer N

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more