[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 733 items for (author: burt & a)

EMDB-63444:
Zebrafish ovum lysosomal peptide:N-glycanase
Method: single particle / : Honda A, Kamada K, Burton-Smith RN, Murata K, Suzuki T

PDB-9lwg:
Zebrafish ovum lysosomal peptide:N-glycanase
Method: single particle / : Honda A, Kamada K, Burton-Smith RN, Murata K, Suzuki T

EMDB-52748:
Ku from Mycobacterium tuberculosis bound to DNA
Method: single particle / : Chaplin AK, Zahid S

PDB-9i91:
Ku from Mycobacterium tuberculosis bound to DNA
Method: single particle / : Chaplin AK, Zahid S

EMDB-64895:
Ushikuvirus (9.3A cryo-EM map)
Method: single particle / : Burton-Smith RN, Murata K

EMDB-54837:
Chlamydomonas nuclear envelope-bound ribosome
Method: subtomogram averaging / : Waltz F, Lamm L, Righetto RD, Engel BD

EMDB-48548:
SARS-CoV-2 S2 monomer in complex with R125-61 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

EMDB-48549:
SARS-CoV-2 S2 monomer in complex with NICA01B-1113 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

EMDB-48550:
SARS-CoV-2 S2 monomer in complex with NICA01A-1401 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

PDB-9mr1:
SARS-CoV-2 S2 monomer in complex with R125-61 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

PDB-9mr2:
SARS-CoV-2 S2 monomer in complex with NICA01A-1401 Fab
Method: single particle / : Park S, Bangaru B, Ward AB

EMDB-65526:
LH2 complex from Ectothiorhodospira haloalkaliphila with inhibited carotenoid biosynthesis
Method: single particle / : Burtseva AD, Baymukhametov TN, Popov VO, Ashikhmin AA, Boyko KM

PDB-9w1c:
LH2 complex from Ectothiorhodospira haloalkaliphila with inhibited carotenoid biosynthesis
Method: single particle / : Burtseva AD, Baymukhametov TN, Popov VO, Ashikhmin AA, Boyko KM

EMDB-64812:
Phycobilisome Rx rod from Gloeobacter violaceus PCC 7421
Method: single particle / : Burtseva AD, Baymukhametov TN, Slonimskiy YB, Popov VO, Sluchanko NN, Boyko KM

EMDB-64813:
Phycobilisome rod R2 from Gloeobacter violaceus PCC 7421
Method: single particle / : Burtseva AD, Baymukhametov TN, Slonimskiy YB, Popov VO, Sluchanko NN, Boyko KM

EMDB-64814:
Phycobilisome rod R3 from Gloeobacter violaceus PCC 7421
Method: single particle / : Burtseva AD, Baymukhametov TN, Slonimskiy YB, Popov VO, Sluchanko NN, Boyko KM

EMDB-64815:
Phycobilisome core from Gloeobacter violaceus PCC 7421
Method: single particle / : Burtseva AD, Baymukhametov TN, Slonimskiy YB, Popov VO, Sluchanko NN, Boyko KM

EMDB-64816:
Phycobilisome allophycocyanin hexamer C from Gloeobacter violaceus PCC 7421
Method: single particle / : Burtseva AD, Baymukhametov TN, Slonimskiy YB, Popov VO, Sluchanko NN, Boyko KM

EMDB-64817:
Phycobilisome rod R1 from Gloeobacter violaceus PCC 7421
Method: single particle / : Burtseva AD, Baymukhametov TN, Slonimskiy YB, Popov VO, Sluchanko NN, Boyko KM

EMDB-64828:
Phycobilisome from Gloeobacter violaceus PCC 7421
Method: single particle / : Burtseva AD, Baymukhametov TN, Slonimskiy YB, Popov VO, Sluchanko NN, Boyko KM

EMDB-64851:
Phycobilisome from Gloeobacter violaceus PCC 7421, conformation with diverging rods
Method: single particle / : Burtseva AD, Baymukhametov TN, Slonimskiy YB, Popov VO, Sluchanko NN, Boyko KM

EMDB-64852:
Phycobilisome from Gloeobacter violaceus PCC 7421, conformation with parallel rods
Method: single particle / : Burtseva AD, Baymukhametov TN, Slonimskiy YB, Popov VO, Sluchanko NN, Boyko KM

EMDB-64868:
Phycobilisome from Gloeobacter violaceus PCC 7421,composite map
Method: single particle / : Burtseva AD, Baymukhametov TN, Slonimskiy YB, Popov VO, Sluchanko NN, Boyko KM

PDB-9v7g:
Phycobilisome Rx rod from Gloeobacter violaceus PCC 7421
Method: single particle / : Burtseva AD, Baymukhametov TN, Slonimskiy YB, Popov VO, Sluchanko NN, Boyko KM

PDB-9v7h:
Phycobilisome rod R2 from Gloeobacter violaceus PCC 7421
Method: single particle / : Burtseva AD, Baymukhametov TN, Slonimskiy YB, Popov VO, Sluchanko NN, Boyko KM

PDB-9v7i:
Phycobilisome rod R3 from Gloeobacter violaceus PCC 7421
Method: single particle / : Burtseva AD, Baymukhametov TN, Slonimskiy YB, Popov VO, Sluchanko NN, Boyko KM

PDB-9v7j:
Phycobilisome core from Gloeobacter violaceus PCC 7421
Method: single particle / : Burtseva AD, Baymukhametov TN, Slonimskiy YB, Popov VO, Sluchanko NN, Boyko KM

PDB-9v7k:
Phycobilisome allophycocyanin hexamer C from Gloeobacter violaceus PCC 7421
Method: single particle / : Burtseva AD, Baymukhametov TN, Slonimskiy YB, Popov VO, Sluchanko NN, Boyko KM

PDB-9v7l:
Phycobilisome rod R1 from Gloeobacter violaceus PCC 7421
Method: single particle / : Burtseva AD, Baymukhametov TN, Slonimskiy YB, Popov VO, Sluchanko NN, Boyko KM

EMDB-65822:
Apoferritin (118% Super resolution Nyquist, 236% physical Nyquist) by PASR on Acquisition-time Super Resolution K3 data
Method: single particle / : Burton-Smith RN, Murata K

PDB-9wal:
Apoferritin (118% Super resolution Nyquist, 236% physical Nyquist) by PASR on Acquisition-time Super Resolution K3 data
Method: single particle / : Burton-Smith RN, Murata K

EMDB-39095:
Funes-induced Orb2 amyloid like endogenous Orb2 amyloid
Method: helical / : Hervas R, Si K

EMDB-48344:
D24.1M01 Fab bound to HPV16 L1 pentamer
Method: single particle / : Hurlburt NK, Singh S, Rodarte JV, Pancera M

EMDB-48345:
A7M08 Fab bound to HPV16 L1 pentamer
Method: single particle / : Hurlburt NK, Singh S, Rodarte JV, Pancera M

EMDB-48346:
B25M05 Fab bound to HPV16 L1 pentamer
Method: single particle / : Hurlburt NK, Singh S, Rodarte JV, Pancera M

PDB-9ml1:
D24.1M01 Fab bound to HPV16 L1 pentamer
Method: single particle / : Hurlburt NK, Singh S, Rodarte JV, Pancera M

PDB-9ml2:
A7M08 Fab bound to HPV16 L1 pentamer
Method: single particle / : Hurlburt NK, Singh S, Rodarte JV, Pancera M

PDB-9ml3:
B25M05 Fab bound to HPV16 L1 pentamer
Method: single particle / : Hurlburt NK, Singh S, Rodarte JV, Pancera M

EMDB-48523:
RM017 Fab in complex with Apex-GT6.2 trimer and RM20A3 Fab
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

PDB-9mqg:
RM017 Fab in complex with Apex-GT6.2 trimer and RM20A3 Fab
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-44341:
RM038 Fab in complex with Apex-GT 6.2 trimer and RM20A3 Fab
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-44342:
RM018 Fab in complex with Apex GT 6.2 trimer and RM20A3 Fab
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

PDB-9b8b:
RM038 Fab in complex with Apex-GT 6.2 trimer and RM20A3 Fab
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

PDB-9b8c:
RM018 Fab in complex with Apex GT 6.2 trimer and RM20A3 Fab
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-63646:
I-shaped amyloid fiber (40) of Tottori (D7N) mutant
Method: helical / : Burton-Smith RN, Murata K

EMDB-63647:
V-shaped amyloid fiber (40) of Tottori (D7N) mutant (type 1)
Method: helical / : Burton-Smith RN, Murata K

EMDB-63648:
V'-shaped short pitch amyloid fiber (40) of Tottori (D7N) mutant
Method: helical / : Burton-Smith RN, Murata K

EMDB-64274:
V-shaped amyloid fiber (40) of Tottori (D7N) mutant (type 2)
Method: helical / : Burton-Smith RN, Murata K

PDB-9m5p:
I-type amyloid fibril (40) of Tottori (D7N) mutant
Method: helical / : Burton-Smith RN, Murata K

PDB-9m5q:
V-type (V1-type) amyloid fibril (40) of Tottori (D7N) mutant
Method: helical / : Burton-Smith RN, Murata K

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more