[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,983 items for (author: ban & a)

EMDB-43439:
HER2 S310F in complex with TL1 Fab
Method: single particle / : Bang I, Koide S

PDB-8vqd:
HER2 S310F in complex with TL1 Fab
Method: single particle / : Bang I, Koide S

EMDB-51452:
eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16
Method: single particle / : Bothe A, Ban N, Kostova K

PDB-9gmo:
eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16
Method: single particle / : Bothe A, Ban N, Kostova K

EMDB-41658:
TCR in nanodisc ND-I
Method: single particle / : Notti RQ, Walz T

EMDB-41660:
TCR in nanodisc ND-II
Method: single particle / : Notti RQ, Walz T

EMDB-44417:
TCR GDN detergent micelle
Method: single particle / : Notti RQ, Walz T

EMDB-45166:
TCR - CD3 complex bound to HLA
Method: single particle / : Notti RQ, Walz T

PDB-8tw4:
TCR in nanodisc ND-I
Method: single particle / : Notti RQ, Walz T

PDB-8tw6:
TCR in nanodisc ND-II
Method: single particle / : Notti RQ, Walz T

PDB-9bbc:
TCR GDN detergent micelle
Method: single particle / : Notti RQ, Walz T

PDB-9c3e:
TCR - CD3 complex bound to HLA
Method: single particle / : Notti RQ, Walz T

EMDB-19056:
CryoEM structure of mTORC1 with a paediatric kidney cancer-associated 1455-EWED-1458 duplication in mTOR, Focused region of mTOR and RAPTOR on one protomer copy.
Method: single particle / : Anandapadamanaban M, Hay IM, Perisic O, Williams RL

PDB-8rcn:
CryoEM structure of mTORC1 with a paediatric kidney cancer-associated 1455-EWED-1458 duplication in mTOR, Focused region of mTOR and RAPTOR on one protomer copy.
Method: single particle / : Anandapadamanaban M, Hay IM, Perisic O, Williams RL

EMDB-19053:
CryoEM structure of mTORC1 with a paediatric kidney cancer-associated 1455-EWED-1458 duplication in mTOR, Focused on one protomer copy.
Method: single particle / : Anandapadamanaban M, Hay IM, Perisic O, Williams RL

PDB-8rck:
CryoEM structure of mTORC1 with a paediatric kidney cancer-associated 1455-EWED-1458 duplication in mTOR, Focused on one protomer copy.
Method: single particle / : Anandapadamanaban M, Hay IM, Perisic O, Williams RL

EMDB-19052:
CryoEM structure of mTORC1 with a paediatric kidney cancer-associated 1455-EWED-1458 duplication in mTOR, overall refinement
Method: single particle / : Anandapadamanaban M, Hay IM, Perisic O, Williams RL

PDB-8rch:
CryoEM structure of mTORC1 with a paediatric kidney cancer-associated 1455-EWED-1458 duplication in mTOR, overall refinement
Method: single particle / : Anandapadamanaban M, Hay IM, Perisic O, Williams RL

EMDB-50127:
Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E - local refinement
Method: single particle / : Yudin D, Scaiola A, Ban N

EMDB-50128:
Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E - local refinement
Method: single particle / : Yudin D, Scaiola A, Ban N

EMDB-50129:
Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK - local refinement
Method: single particle / : Yudin D, Scaiola A, Ban N

EMDB-50130:
Mammalian ternary complex of an 80S ribosome, NAC and NatA/E
Method: single particle / : Yudin D, Scaiola A, Ban N

EMDB-43478:
Structure of a synthetic antibody in complex with a class I MHC presenting a hapten-peptide conjugate
Method: single particle / : Maso L, Bang I, Koide S

EMDB-43479:
Structure of a synthetic antibody in complex with a class I MHC presenting a hapten-peptide conjugate
Method: single particle / : Maso L, Bang I, Koide S

EMDB-43480:
Structure of a synthetic antibody in complex with a class I MHC presenting a hapten-peptide conjugate
Method: single particle / : Maso L, Bang I, Koide S

PDB-8vr9:
Structure of a synthetic antibody in complex with a class I MHC presenting a hapten-peptide conjugate
Method: single particle / : Maso L, Bang I, Koide S

PDB-8vra:
Structure of a synthetic antibody in complex with a class I MHC presenting a hapten-peptide conjugate
Method: single particle / : Maso L, Bang I, Koide S

PDB-8vrb:
Structure of a synthetic antibody in complex with a class I MHC presenting a hapten-peptide conjugate
Method: single particle / : Maso L, Bang I, Koide S

EMDB-42857:
Prefusion SARS-CoV-2 Spike bound to ACE2 dimers in membranes
Method: subtomogram averaging / : Li W, Mothes W, Grunst MW, Qin Z

EMDB-42859:
Prehairpin intermediate of SARS-CoV-2 Spike in membrane
Method: subtomogram averaging / : Li W, Mothes W, Grunst MW, Qin Z

EMDB-42865:
Post-fusion SARS-CoV-2 Spike in membrane
Method: subtomogram averaging / : Li W, Mothes W, Grunst MW, Qin Z

EMDB-42875:
ACE2 dimer bound to one RBD in membrane
Method: subtomogram averaging / : Qin Z, Li W, Grunst MW, Mothes W

EMDB-42876:
ACE2 dimer bound to two RBD in membrane
Method: subtomogram averaging / : Qin Z, Li W, Grunst MW, Mothes W

EMDB-42877:
ACE2 monomer bound to one RBD in membrane
Method: subtomogram averaging / : Qin Z, Li W, Grunst MW, Mothes W

EMDB-50124:
Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
Method: single particle / : Yudin D, Scaiola A, Ban N

EMDB-50125:
Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E
Method: single particle / : Yudin D, Scaiola A, Ban N

EMDB-50126:
Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK
Method: single particle / : Yudin D, Scaiola A, Ban N

PDB-9f1b:
Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
Method: single particle / : Yudin D, Scaiola A, Ban N

PDB-9f1c:
Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E
Method: single particle / : Yudin D, Scaiola A, Ban N

PDB-9f1d:
Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK
Method: single particle / : Yudin D, Scaiola A, Ban N

EMDB-45206:
Reconstituted P400 Subcomplex of the human TIP60 complex
Method: single particle / : Yang Z, Mameri A, Florez Ariza AJ, Cote J, Nogales E

EMDB-45240:
P400 subcomplex of the native human TIP60 complex
Method: single particle / : Yang Z, Mameri A, Florez Ariza AJ, Cote J, Nogales E

EMDB-45252:
ARP module of the human TIP60 complex
Method: single particle / : Yang Z, Mameri A, Florez Ariza AJ, Cote J, Nogales E

PDB-9c57:
Reconstituted P400 Subcomplex of the human TIP60 complex
Method: single particle / : Yang Z, Mameri A, Florez Ariza AJ, Cote J, Nogales E

PDB-9c62:
P400 subcomplex of the native human TIP60 complex
Method: single particle / : Yang Z, Mameri A, Florez Ariza AJ, Cote J, Nogales E

PDB-9c6n:
ARP module of the human TIP60 complex
Method: single particle / : Yang Z, Mameri A, Florez Ariza AJ, Cote J, Nogales E

EMDB-19209:
TadA/CpaF with ADP
Method: single particle / : Hohl M, Low H

EMDB-19275:
TadA/CpaF with AMPPNP
Method: single particle / : Hohl M, Low H

EMDB-19279:
TadA/CpaF nucleotide free
Method: single particle / : Hohl M, Low H

PDB-8rjf:
TadA/CpaF with ADP
Method: single particle / : Hohl M, Low H

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more