[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 84 items for (author: aplin & c)

EMDB-41574:
Cryo-EM structure of transglutaminase 2 bound to GDP
Method: single particle / : Aplin C, Cerione RA

EMDB-42356:
Cryo-EM map of transglutaminase 2 bound to calcium
Method: single particle / : Aplin C, Cerione RA

PDB-8tr9:
Cryo-EM structure of transglutaminase 2 bound to GDP
Method: single particle / : Aplin C, Cerione RA

EMDB-19568:
DtpB hexamer from Streptomyces lividans
Method: single particle / : Worrall JAR, Chaplin AK, Allport T

PDB-8rwy:
DtpB hexamer from Streptomyces lividans
Method: single particle / : Worrall JAR, Chaplin AK, Allport T

EMDB-40918:
Human glutaminase C (Y466W) with L-Gln and Pi, filamentous form
Method: helical / : Feng S, Aplin C, Nguyen TTT, Milano SK, Cerione RA

EMDB-40920:
Human liver-type glutaminase (Apo form)
Method: single particle / : Feng S, Aplin C, Nguyen TTT, Milano SK, Cerione RA

EMDB-40950:
Human liver-type glutaminase (K253A) with L-Gln, filamentous form
Method: helical / : Feng S, Aplin C, Nguyen TTT, Milano SK, Cerione RA

EMDB-43533:
Human liver-type glutaminase, bound with inhibitor Compound 968
Method: single particle / : Feng S, Aplin C, Nguyen TTT, Milano SK, Cerione RA

PDB-8szj:
Human glutaminase C (Y466W) with L-Gln and Pi, filamentous form
Method: helical / : Feng S, Aplin C, Nguyen TTT, Milano SK, Cerione RA

PDB-8szl:
Human liver-type glutaminase (Apo form)
Method: single particle / : Feng S, Aplin C, Nguyen TTT, Milano SK, Cerione RA

PDB-8t0z:
Human liver-type glutaminase (K253A) with L-Gln, filamentous form
Method: helical / : Feng S, Aplin C, Nguyen TTT, Milano SK, Cerione RA

EMDB-42208:
Cryo-EM structure of bovine phosphodiesterase 6
Method: single particle / : Aplin C, Cerione RA

EMDB-42220:
Cryo-EM structure of bovine phosphodiesterase 6 bound to udenafil
Method: single particle / : Aplin C, Cerione RA

EMDB-42234:
Cryo-EM structure of bovine phosphodiesterase 6 bound to cGMP
Method: single particle / : Aplin C, Cerione RA

EMDB-42235:
Bovine rod phosphodiesterase 6 bound to one retinal transducin alpha subunit
Method: single particle / : Aplin C, Cerione RA

EMDB-42237:
Bovine rod phosphodiesterase 6 bound to two retinal transducin alpha subunits
Method: single particle / : Aplin C, Cerione RA

EMDB-42238:
Bovine rod phosphodiesterase 6 bound to two chimera transducin alpha subunits without a stabilizing antibody
Method: single particle / : Aplin C, Cerione RA

EMDB-42358:
Cryo-EM structure of bovine phosphodiesterase 6 bound to IBMX
Method: single particle / : Aplin C, Cerione RA

PDB-8ufi:
Cryo-EM structure of bovine phosphodiesterase 6
Method: single particle / : Aplin C, Cerione RA

PDB-8ugb:
Cryo-EM structure of bovine phosphodiesterase 6 bound to udenafil
Method: single particle / : Aplin C, Cerione RA

PDB-8ugs:
Cryo-EM structure of bovine phosphodiesterase 6 bound to cGMP
Method: single particle / : Aplin C, Cerione RA

PDB-8ulg:
Cryo-EM structure of bovine phosphodiesterase 6 bound to IBMX
Method: single particle / : Aplin C, Cerione RA

EMDB-16145:
Cryo-EM structure of NHEJ supercomplex(trimer)
Method: single particle / : Hardwick SW, Chaplin AK

PDB-8bot:
Cryo-EM structure of NHEJ supercomplex(trimer)
Method: single particle / : Hardwick SW, Chaplin AK

EMDB-15022:
CryoEM structure of Ku heterodimer bound to DNA, PAXX and XLF
Method: single particle / : Hardwick SW, Kefala-Stavridi A, Chirgadze DY, Blundell TL, Chaplin AK

EMDB-16044:
DNA-PK Ku80 mediated dimer bound to PAXX
Method: single particle / : Hardwick SW, Chaplin AK

EMDB-16070:
DNA-PK XLF mediated dimer bound to PAXX
Method: single particle / : Hardwick SW, Chaplin AK

EMDB-16074:
DNA-PK Ku80 mediated dimer bound to PAXX and XLF
Method: single particle / : Hardwick SW, Chaplin AK

PDB-7zyg:
CryoEM structure of Ku heterodimer bound to DNA, PAXX and XLF
Method: single particle / : Hardwick SW, Kefala-Stavridi A, Chirgadze DY, Blundell TL, Chaplin AK

PDB-8bh3:
DNA-PK Ku80 mediated dimer bound to PAXX
Method: single particle / : Hardwick SW, Chaplin AK

PDB-8bhv:
DNA-PK XLF mediated dimer bound to PAXX
Method: single particle / : Hardwick SW, Chaplin AK

PDB-8bhy:
DNA-PK Ku80 mediated dimer bound to PAXX and XLF
Method: single particle / : Hardwick SW, Chaplin AK

EMDB-14995:
CryoEM structure of Ku heterodimer bound to DNA and PAXX
Method: single particle / : Hardwick SW, Kefala-Stavridi A, Chirgadze DY, Blundell TL, Chaplin AK

PDB-7zwa:
CryoEM structure of Ku heterodimer bound to DNA and PAXX
Method: single particle / : Hardwick SW, Kefala-Stavridi A, Chirgadze DY, Blundell TL, Chaplin AK

EMDB-14986:
CryoEM structure of Ku heterodimer bound to DNA
Method: single particle / : Hardwick SW, Kefala-Stavridi A, Chirgadze DY, Blundell TL, Chaplin AK

PDB-7zvt:
CryoEM structure of Ku heterodimer bound to DNA
Method: single particle / : Hardwick SW, Kefala-Stavridi A, Chirgadze DY, Blundell TL, Chaplin AK

EMDB-14955:
Cryo-EM structure of Ku 70/80 bound to inositol hexakisphosphate
Method: single particle / : Kefala Stavridi A, Chaplin AK, Blundell TL

PDB-7zt6:
Cryo-EM structure of Ku 70/80 bound to inositol hexakisphosphate
Method: single particle / : Kefala Stavridi A, Chaplin AK, Blundell TL

EMDB-13443:
DNA-PK in complex with ATPgammaS
Method: single particle / : Liang S, Blundell TL

EMDB-13062:
Cryo-EM structure of DNA-PKcs in complex with NU7441
Method: single particle / : Liang S, Thomas SE

EMDB-13064:
DNA-PKcs in complex with ATPgammaS-Mg
Method: single particle / : Liang S, Thomas SE

EMDB-13067:
DNA-PKcs in complex with wortmannin
Method: single particle / : Liang S, Thomas SE

EMDB-13068:
DNA-PKcs in complex with AZD7648
Method: single particle / : Liang S, Thomas SE

EMDB-13069:
DNA-PKcs in complex with M3814
Method: single particle / : Liang S, Thomas SE

PDB-7otm:
Cryo-EM structure of DNA-PKcs in complex with NU7441
Method: single particle / : Liang S, Thomas SE, Blundell TL

PDB-7otp:
DNA-PKcs in complex with ATPgammaS-Mg
Method: single particle / : Liang S, Thomas SE, Blundell TL

PDB-7otv:
DNA-PKcs in complex with wortmannin
Method: single particle / : Liang S, Thomas SE, Blundell TL

PDB-7otw:
DNA-PKcs in complex with AZD7648
Method: single particle / : Liang S, Thomas SE, Blundell TL

PDB-7oty:
DNA-PKcs in complex with M3814
Method: single particle / : Liang S, Thomas SE, Blundell TL

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more