[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 5,876 items for (author: alex & k)

EMDB-70890:
C1 symmetry cryoEM structure of the soluble-WRAPed membranous portion of MspA (Mycobacterium smegmatis porin), dimerized along the native interface.
Method: single particle / : Weidle C, Carr KD, Alexis C, Borst AJ

PDB-9ov5:
C1 symmetry cryoEM structure of the soluble-WRAPed membranous portion of MspA (Mycobacterium smegmatis porin), dimerized along the native interface.
Method: single particle / : Weidle C, Carr KD, Alexis C, Borst AJ

EMDB-75011:
MP1104-bound Kappa Opioid Receptor in complex with beta-arrestin1
Method: single particle / : Han J, Chen M, Che T

PDB-9zzo:
MP1104-bound Kappa Opioid Receptor in complex with beta-arrestin1
Method: single particle / : Han J, Chen M, Che T

EMDB-75834:
Cryo-EM Structure of Human C3 Pro-Convertase bound to the Compstatin Analog Cp60, TED Conformation 1
Method: single particle / : Herbine K, Lambris J

EMDB-75835:
Cryo-EM Structure of Human C3 Pro-Convertase bound to the Compstatin Analog Cp60, TED Conformation 2
Method: single particle / : Herbine K, Lambris J

PDB-11mg:
Cryo-EM Structure of Human C3 Pro-Convertase bound to the Compstatin Analog Cp60, TED Conformation 1
Method: single particle / : Herbine K, Lambris J

PDB-11mh:
Cryo-EM Structure of Human C3 Pro-Convertase bound to the Compstatin Analog Cp60, TED Conformation 2
Method: single particle / : Herbine K, Lambris J

EMDB-72009:
Q10M-055 Fab in complex with HIV-1 Env Q23 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-72031:
Q12QBM-007 Fab in complex with HIV-1 Env BG505 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-72033:
Q9M-023 Fab in complex with HIV-1 Env BG505 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-72035:
Q12BBM-069 Fab in complex with HIV-1 Env BG505 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-74449:
Q7M-675 Fab in complex with HIV-1 Env WITO NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9py5:
Q10M-055 Fab in complex with HIV-1 Env Q23 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9pyd:
Q12QBM-007 Fab in complex with HIV-1 Env BG505 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9pyh:
Q9M-023 Fab in complex with HIV-1 Env BG505 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9pyk:
Q12BBM-069 Fab in complex with HIV-1 Env BG505 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-76261:
Spermine-blocked open-state cryo-EM structure of human TRPV6 channel in cNW30 nanodiscs
Method: single particle / : Neuberger A, Sobolevsky AI

PDB-12ag:
Spermine-blocked open-state cryo-EM structure of human TRPV6 channel in cNW30 nanodiscs
Method: single particle / : Neuberger A, Sobolevsky AI

EMDB-65508:
Cryo-EM structure of S1P2 in complex with heterotrimeric G protein
Method: single particle / : Wu B, Zhao Q, Tan Q

EMDB-65510:
cryoEM structure of S1P3 in complex with heterotrimeric G protein
Method: single particle / : Wu B, Zhao Q, Tan Q

PDB-9w0m:
Cryo-EM structure of S1P2 in complex with heterotrimeric G protein
Method: single particle / : Wu B, Zhao Q, Tan Q

PDB-9w0o:
cryoEM structure of S1P3 in complex with heterotrimeric G protein
Method: single particle / : Wu B, Zhao Q, Tan Q

EMDB-70780:
CryoEM structure of the soluble-WRAPed membranous portion of MspA (Mycobacterium smegmatis porin), dimerized along the native interface.
Method: single particle / : Carr KD, Weidle C, Alexis C, Borst AJ

PDB-9orp:
CryoEM structure of the soluble-WRAPed membranous portion of MspA (Mycobacterium smegmatis porin), dimerized along the native interface.
Method: single particle / : Carr KD, Weidle C, Alexis C, Borst AJ

EMDB-74008:
Visualization of PriA/PriB/DnaT complexes reveals mechanisms governing structure-specific assembly of the DNA replication restart primosome
Method: single particle / : Duckworth AT, Keck JL, Grant T

EMDB-74009:
Visualization of PriA/PriB/DnaT complexes reveals mechanisms governing structure-specific assembly of the DNA replication restart primosome
Method: single particle / : Duckworth AT, Keck JL, Grant T

PDB-9zbt:
Visualization of PriA/PriB/DnaT complexes reveals mechanisms governing structure-specific assembly of the DNA replication restart primosome
Method: single particle / : Duckworth AT, Keck JL, Grant T

PDB-9zbu:
Visualization of PriA/PriB/DnaT complexes reveals mechanisms governing structure-specific assembly of the DNA replication restart primosome
Method: single particle / : Duckworth AT, Keck JL, Grant T

EMDB-75027:
Adenovirus comprising hexons displaying BAP in the HVR5 region
Method: single particle / : Reddy VS, Ma OS

EMDB-75053:
Adenovirus hexon displaying BAP insertion in the HVR5 region
Method: single particle / : Reddy VS, Ma OX

EMDB-75076:
Adenovirus decorated with Zwitterionic peptides
Method: single particle / : Reddy VS, Ma OX

EMDB-75090:
Structure of an adenovirus hexon with Zwitterionic insertion in HVR5
Method: single particle / : Reddy VS, Ma OX

EMDB-75094:
Human adenovirus hexon and polyclonal antibody complex
Method: single particle / : Reddy VS, Ma OX

EMDB-75097:
Human adenovirus 657 bound to Fabs of polyclonal antibodies.
Method: single particle / : Reddy VS, Ma OX

PDB-10bu:
Adenovirus hexon displaying BAP insertion in the HVR5 region
Method: single particle / : Reddy VS, Ma OX

PDB-10dk:
Structure of an adenovirus hexon with Zwitterionic insertion in HVR5
Method: single particle / : Reddy VS, Ma OX

PDB-10dp:
Human adenovirus hexon and polyclonal antibody complex
Method: single particle / : Reddy VS, Ma OX

EMDB-64861:
Cryo-EM structure of the ArlB filament of Haloarcula marismortui
Method: single particle / : Meshcheryakov VA, Hyun J, Syutkin AS, Pyatibratov MG, Wolf M

EMDB-64862:
Cryo-EM structure of the inner core of ArlA2 filament of Haloarcula marismortui
Method: single particle / : Meshcheryakov VA, Hyun J, Syutkin AS, Pyatibratov MG, Wolf M

EMDB-67194:
Cryo-EM structure of ArlA2 filament of Haloarcula marismortui
Method: helical / : Meshcheryakov VA, Hyun J, Syutkin AS, Pyatibratov MG, Wolf M

PDB-9v95:
Cryo-EM structure of the ArlB filament of Haloarcula marismortui
Method: single particle / : Meshcheryakov VA, Hyun J, Syutkin AS, Pyatibratov MG, Wolf M

PDB-9v96:
Cryo-EM structure of the inner core of ArlA2 filament of Haloarcula marismortui
Method: single particle / : Meshcheryakov VA, Hyun J, Syutkin AS, Pyatibratov MG, Wolf M

PDB-9xtb:
Cryo-EM structure of ArlA2 filament of Haloarcula marismortui
Method: helical / : Meshcheryakov VA, Hyun J, Syutkin AS, Pyatibratov MG, Wolf M

EMDB-75049:
Human Excitatory Amino Acid Transporter 3 in 300 mM potassium and 0.1 mM Cmpd 3e in the outward-facing (OFS) state
Method: single particle / : Earsley A, Qiu B, Boudker O

EMDB-53943:
Manikomycin bound to the Escherichia coli 50S ribosomal subunit
Method: single particle / : Kaur M, Travin D, Berger MJ, Jangra M, Morici M, Safdari HA, Guitor AK, Koteva K, Xu M, Chen X, Vazquez-Laslop N, Mankin AS, Wilson DN, Wright G

EMDB-54009:
Manikomycin bound to the Escherichia coli 70S ribosome
Method: single particle / : Kaur M, Travin D, Berger MJ, Jangra M, Morici M, Safdari HA, Guitor AK, Koteva K, Xu M, Chen X, Vazquez-Laslop N, Mankin AS, Wilson DN, Wright G

PDB-9rfw:
Manikomycin bound to the Escherichia coli 50S ribosomal subunit
Method: single particle / : Kaur M, Travin D, Berger MJ, Jangra M, Morici M, Safdari HA, Guitor AK, Koteva K, Xu M, Chen X, Vazquez-Laslop N, Mankin AS, Wilson DN, Wright G

PDB-9rja:
Manikomycin bound to the Escherichia coli 70S ribosome
Method: single particle / : Kaur M, Travin D, Berger MJ, Jangra M, Morici M, Safdari HA, Guitor AK, Koteva K, Xu M, Chen X, Vazquez-Laslop N, Mankin AS, Wilson DN, Wright G

EMDB-70605:
Two Component Protein Nano-Particle (T=3). De Novo Design, Computationally Relaxed into Low Resolution Single Particle CryoEM Map with Icosahedral Symmetry Applied
Method: single particle / : DiMaio F, Weidle C

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more