[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 65 items for (author: hartman & ra)

EMDB-17104:
AApoAII amyloid fibril Morphology II (ex vivo)
Method: helical / : Andreotti G, Schmidt M, Faendrich M

EMDB-17105:
AApoAII amyloid fibril Morphology I (ex vivo)
Method: helical / : Andreotti G, Schmidt M, Faendrich M

PDB-8oq4:
AApoAII amyloid fibril Morphology II (ex vivo)
Method: helical / : Andreotti G, Schmidt M, Faendrich M

PDB-8oq5:
AApoAII amyloid fibril Morphology I (ex vivo)
Method: helical / : Andreotti G, Schmidt M, Faendrich M

EMDB-26786:
CPV Affinity Purified Polyclonal Fab A Site Fab
Method: single particle / : Hartmann SR, Hafenstein SL, Charnesky AJ

EMDB-26787:
CPV Affinity Purified Polyclonal Fab B Site Fab
Method: single particle / : Hartmann SR, Hafenstein SL, Charnesky AJ

EMDB-26788:
CPV Total-Fab Polyclonal A Site Fab
Method: single particle / : Hartmann SR, Hafenstein SL, Charnesky AJ

EMDB-26789:
CPV Total-Fab Polyclonal B Site Fab (1 of 2)
Method: single particle / : Hartmann SR, Hafenstein SL, Charnesky AJ

EMDB-26790:
CPV Total-Fab Polyclonal B Site Fab (2 of 2)
Method: single particle / : Hartmann SR, Hafenstein SL, Charnesky AJ

EMDB-26610:
Cryo-EM structure of rabbit RyR1 in the presence of high Mg2+ and AMP-PCP in nanodisc
Method: single particle / : Nayak AR, Samso M

EMDB-15860:
Cryo-EM structure of ribosome-Sec61-TRAP (TRanslocon Associated Protein) translocon complex
Method: single particle / : Pauwels E, Shewakramani NR, De Wijngaert B, Vermeire K, Das K

PDB-8b5l:
Cryo-EM structure of ribosome-Sec61-TRAP (TRanslocon Associated Protein) translocon complex
Method: single particle / : Pauwels E, Shewakramani NR, De Wijngaert B, Vermeire K, Das K

EMDB-15863:
Cryo-EM structure of ribosome-Sec61 in complex with cyclotriazadisulfonamide derivative CK147
Method: single particle / : Pauwels E, Shewakramani NR, De Wijngaert B, Vermeire K, Das K

PDB-8b6c:
Cryo-EM structure of ribosome-Sec61 in complex with cyclotriazadisulfonamide derivative CK147
Method: single particle / : Pauwels E, Shewakramani NR, De Wijngaert B, Vermeire K, Das K

EMDB-14709:
Cryo-EM structure of human NKCC1 (TM domain)
Method: single particle / : Nissen P, Fenton R, Neumann C, Lindtoft Rosenbaek L, Kock Flygaard R, Habeck M, Lykkegaard Karlsen J, Wang Y, Lindorff-Larsen K, Gad H, Hartmann R, Lyons J

PDB-7zgo:
Cryo-EM structure of human NKCC1 (TM domain)
Method: single particle / : Nissen P, Fenton R, Neumann C, Lindtoft Rosenbaek L, Kock Flygaard R, Habeck M, Lykkegaard Karlsen J, Wang Y, Lindorff-Larsen K, Gad H, Hartmann R, Lyons J

EMDB-13416:
Human voltage-gated potassium channel Kv3.1 (apo condition)
Method: single particle / : Chi G, Venkaya S, Singh NK, McKinley G, Mukhopadhyay SMM, Marsden B, MacLean EM, Fernandez-Cid A, Pike ACW, Savva C, Ragan TJ, Burgess-Brown NA, Duerr KL

EMDB-13417:
Human voltage-gated potassium channel Kv3.1 (with Zn)
Method: single particle / : Chi G, Qian P, Castro-Hartmann P, Venkaya S, Singh NK, McKinley G, Mukhopadhyay SMM, Fernandez-Cid A, Marsden B, MacLean EM, Pike ACW, Sader K, Burgess-Brown NA, Duerr KL

EMDB-13418:
Human voltage-gated potassium channel Kv3.1 in dimeric state (with Zn)
Method: single particle / : Chi G, Qian P, Castro-Hartmann P, Venkaya S, Singh NK, McKinley G, Mukhopadhyay SMM, Marsden B, MacLean EM, Fernandez-Cid A, Pike ACW, Sader K, Burgess-Brown NA, Duerr KL

EMDB-13419:
Human voltage-gated potassium channel Kv3.1 (with EDTA)
Method: single particle / : Chi G, Qian P, Castro-Hartmann P, Venkaya S, Singh NK, McKinley G, Mukhopadhyay SMM, Fernandez-Cid A, Pike ACW, Marsden B, MacLean EM, Sader K, Burgess-Brown NA, Duerr KL

PDB-7phh:
Human voltage-gated potassium channel Kv3.1 (apo condition)
Method: single particle / : Chi G, Venkaya S, Singh NK, McKinley G, Mukhopadhyay SMM, Marsden B, MacLean EM, Fernandez-Cid A, Pike ACW, Savva C, Ragan TJ, Burgess-Brown NA, Duerr KL

PDB-7phi:
Human voltage-gated potassium channel Kv3.1 (with Zn)
Method: single particle / : Chi G, Qian P, Castro-Hartmann P, Venkaya S, Singh NK, McKinley G, Mukhopadhyay SMM, Fernandez-Cid A, Marsden B, MacLean EM, Pike ACW, Sader K, Burgess-Brown NA, Duerr KL

PDB-7phk:
Human voltage-gated potassium channel Kv3.1 in dimeric state (with Zn)
Method: single particle / : Chi G, Qian P, Castro-Hartmann P, Venkaya S, Singh NK, McKinley G, Mukhopadhyay SMM, Marsden B, MacLean EM, Fernandez-Cid A, Pike ACW, Sader K, Burgess-Brown NA, Duerr KL

PDB-7phl:
Human voltage-gated potassium channel Kv3.1 (with EDTA)
Method: single particle / : Chi G, Qian P, Castro-Hartmann P, Venkaya S, Singh NK, McKinley G, Mukhopadhyay SMM, Fernandez-Cid A, Pike ACW, Marsden B, MacLean EM, Sader K, Burgess-Brown NA, Duerr KL

EMDB-12679:
Cryo-EM structure (model_1a) of the RC-dLH complex from Gemmatimonas phototrophica at 2.4 A
Method: single particle / : Qian P, Koblizek M

EMDB-12680:
Cryo-EM structure (model_2a) of the RC-dLH complex from Gemmatimonas phototrophica at 2.5 A
Method: single particle / : Qian P, Koblizek M

EMDB-12681:
Cryo-EM structure of the RC-dLH complex (model_1b) from Gemmatimonas phototrophica at 2.47 A
Method: single particle / : Qian P, Koblizek M

EMDB-12682:
Cryo-EM structure (model_2b) of the RC-dLH complex from Gemmatimonas phototrophica at 2.44 A
Method: single particle / : Qian P, Koblizek M

PDB-7o0u:
Cryo-EM structure (model_1a) of the RC-dLH complex from Gemmatimonas phototrophica at 2.4 A
Method: single particle / : Qian P, Koblizek M

PDB-7o0v:
Cryo-EM structure (model_2a) of the RC-dLH complex from Gemmatimonas phototrophica at 2.5 A
Method: single particle / : Qian P, Koblizek M

PDB-7o0w:
Cryo-EM structure of the RC-dLH complex (model_1b) from Gemmatimonas phototrophica at 2.47 A
Method: single particle / : Qian P, Koblizek M

PDB-7o0x:
Cryo-EM structure (model_2b) of the RC-dLH complex from Gemmatimonas phototrophica at 2.44 A
Method: single particle / : Qian P, Koblizek M

EMDB-24741:
Cryo EM analysis reveals inherent flexibility of authentic murine papillomavirus capsids
Method: single particle / : Hartmann SR, Hafenstein S

PDB-7ryj:
Cryo EM analysis reveals inherent flexibility of authentic murine papillomavirus capsids
Method: single particle / : Hartmann SR, Hafenstein S

EMDB-22615:
Cryo-EM structure of rabbit RyR1 in the presence of Mg2+ and AMP-PCP in nanodisc
Method: single particle / : Nayak AR, Samso M

EMDB-22596:
Focused cryo-EM map of rabbit RyR1 central and transmembrane domains in the presence of Mg2+ and AMP-PCP in nanodisc
Method: single particle / : Nayak AR, Samso M

EMDB-11588:
Structure of low-light grown Chlorella ohadii Photosystem I
Method: single particle / : Caspy I, Nelson N, Nechushtai R, Neumann E, Shkolnisky Y

EMDB-11589:
Structure of high-light grown Chlorella ohadii photosystem I
Method: single particle / : Caspy I, Nelson N, Nechushtai R, Shkolnisky Y, Neumann E

EMDB-11640:
Structure of small high-light grown Chlorella ohadii photosystem I
Method: single particle / : Caspy I, Nelson N

PDB-6zzx:
Structure of low-light grown Chlorella ohadii Photosystem I
Method: single particle / : Caspy I, Nelson N, Nechushtai R, Neumann E, Shkolnisky Y

PDB-6zzy:
Structure of high-light grown Chlorella ohadii photosystem I
Method: single particle / : Caspy I, Nelson N, Nechushtai R, Shkolnisky Y, Neumann E

PDB-7a4p:
Structure of small high-light grown Chlorella ohadii photosystem I
Method: single particle / : Caspy I, Nelson N, Nechushtai R, Shkolnisky Y, Neumann E

EMDB-11860:
Subtomogram average structure of anammoxosomal nitrite oxidoreductase
Method: subtomogram averaging / : Dietrich L

EMDB-11861:
Helical reconstruction of nitrite oxidoreductase from anammox bacteria
Method: helical / : Parey K

EMDB-23081:
High resolution cryo EM analysis of HPV16 identifies minor structural protein L2 and describes capsid flexibility
Method: single particle / : Hartmann SR, Goetschius DJ

PDB-7kzf:
High resolution cryo EM analysis of HPV16 identifies minor structural protein L2 and describes capsid flexibility
Method: single particle / : Hartmann SR, Goetschius DJ, Hafenstein S

EMDB-11692:
Nsp7-Nsp8-Nsp12 SARS-CoV2 RNA-dependent RNA polymerase in complex with template:primer dsRNA and favipiravir-RTP
Method: single particle / : Naydenova K, Muir KW, Wu LF, Zhang Z, Coscia F, Peet M, Castro-Hartman P, Qian P, Sader K, Dent K, Kimanius D, Sutherland JD, Lowe J, Barford D, Russo CJ

PDB-7aap:
Nsp7-Nsp8-Nsp12 SARS-CoV2 RNA-dependent RNA polymerase in complex with template:primer dsRNA and favipiravir-RTP
Method: single particle / : Naydenova K, Muir KW, Wu LF, Zhang Z, Coscia F, Peet M, Castro-Hartman P, Qian P, Sader K, Dent K, Kimanius D, Sutherland JD, Lowe J, Barford D, Russo CJ

EMDB-10223:
Cryo-EM Structure of T. kodakarensis 70S ribosome
Method: single particle / : Matzov D, Sas-Chen A

EMDB-10224:
Cryo-EM Structure of T. kodakarensis 70S ribosome in TkNat10 deleted strain
Method: single particle / : Matzov D, Sas-Chen A

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more