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-Recent 3DEM papers
-Tad and toxin-coregulated pilus structures reveal unexpected diversity in bacterial type IV pili.
Proc Natl Acad Sci U S A, Vol. 120, Issue 49, Page e2316668120, Year 2023
Ravi R Sonani / Juan Carlos Sanchez / Joseph K Baumgardt / Shivani Kundra / Elizabeth R Wright / Lisa Craig / Edward H Egelman
Methods: EM (helical sym.) / EM (single particle)
-Structural basis of Gabija anti-phage defence and viral immune evasion.
Nature, Year 2023
Sadie P Antine / Alex G Johnson / Sarah E Mooney / Azita Leavitt / Megan L Mayer / Erez Yirmiya / Gil Amitai / Rotem Sorek / Philip J Kranzusch
Methods: EM (single particle) / X-ray diffraction
+Structure determination by cryoEM at 100 keV.
Proc Natl Acad Sci U S A, Vol. 120, Issue 49, Page e2312905120, Year 2023
Greg McMullan / Katerina Naydenova / Daniel Mihaylov / Keitaro Yamashita / Mathew J Peet / Hugh Wilson / Joshua L Dickerson / Shaoxia Chen / Giuseppe Cannone / Yang Lee ...Greg McMullan / Katerina Naydenova / Daniel Mihaylov / Keitaro Yamashita / Mathew J Peet / Hugh Wilson / Joshua L Dickerson / Shaoxia Chen / Giuseppe Cannone / Yang Lee / Katherine A Hutchings / Olivia Gittins / Mohamed A Sobhy / Torquil Wells / Mohamed M El-Gomati / Jason Dalby / Matthias Meffert / Clemens Schulze-Briese / Richard Henderson / Christopher J Russo
Methods: EM (single particle)
+Structural insights into intron catalysis and dynamics during splicing.
+Structural insights into cytokine cleavage by inflammatory caspase-4.
-About EM Navigator
-Feb 9, 2022. New format data for meta-information of EMDB entries
New format data for meta-information of EMDB entries
- Version 3 of the EMDB header file is now the official format.
- The previous official version 1.9 will be removed from the archive.
Related info.:EMDB header
External links:wwPDB to switch to version 3 of the EMDB data model
-Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels
Nobel Prize for mechanically activated and temperature-gated ion channels
- The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
- EM Navigator can help to find cryo-EM structure data by both pioneers.
+Aug 12, 2020. Covid-19 info
New page: Covid-19 featured information page in EM Navigator.
Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data
+Mar 5, 2020. Novel coronavirus structure data
Novel coronavirus structure data
- International Committee on Taxonomy of Viruses (ICTV) defined the short name of the 2019 coronavirus as "SARS-CoV-2".
- The species Severe acute respiratory syndrome-related coronavirus: classifying 2019-nCoV and naming it SARS-CoV-2 - nature microbiology
- In the structure databanks used in Yorodumi, some data are registered as the other names, "COVID-19 virus" and "2019-nCoV". Here are the details of the virus and the list of structure data.
Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info
+Jul 5, 2019. Downlodablable text data
Downlodablable text data
Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.
|EMN Search||search result||CSV, TSV, or JSON|
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Related info.:EMN Search / EMN Statistics
3D electron microscopy data browser
- EM Navigator is a browser for 3D electron microscopy (3D-EM) data of biological molecules and assemblies.
- It provides EMDB-PDB cross-search, statistical information, and links to similar structures.
- You can easily check the latest EM structural data and structural papers.
Related info.:EMDB / PDB / PDBj / Q: What are the data sources of EM Navigator? / EMN Search / EMN Papers / EMN Gallery / EMN Statistics / Changes in new EM Navigator and Yorodumi