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EMN Gallery
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Classification

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Gallery

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Cell cycle related (137)

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DNA replication & repair (330)

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RNA transcription & splicing (430)

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Ribosomes - 70S & others (bacteria, archaea, organelles) (370)

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Ribosomes - 80S (eukaryal cytoplasm) (249)

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Ribosomal components (522)

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Protein refolding & degradation (468)

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Respiratory pigments (hemoglobin & hemocyanin) (27)

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Membrane (receptors, channels & pumps) (768)

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Membrane (pores forming & transformation) (232)

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Cytoskeleton & motors (577)

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Needles, pili, secretion machineries & flagella (266)

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Amyloid fibrils (58)

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Cells & organelles (97)

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Viruses & virus-like particles (host: bacteria & archaea) (296)

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Viruses & virus-like particles (host: eukarya) (843)

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Viral components (720)

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Engineered molecules (DNA origami, synthetic peptides) (42)

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Others (548)

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About EMN Gallery

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News

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Jul 12, 2017. Major update of PDB

Major update of PDB

  • wwPDB released updated PDB data conforming to the new PDBx/mmCIF dictionary. This is a major update changing the version number from 4 to 5, and with Remediation, in which all the entries are updated. See below links for details.
  • In this update, many items about electron microscopy experimental information are reorganized (e.g. em_software). Now, EM Navigator and Yorodumi are based on the updated data.

External links: wwPDB Remediation / Enriched Model Files Conforming to OneDep Data Standards Now Available in the PDB FTP Archive

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Jun 16, 2017. Omokage search with filter

Omokage search with filter

  • Result of Omokage search can be filtered by keywords and the database types

Related info.: Omokage search

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Sep 15, 2016. EM Navigator & Yorodumi renewed

EM Navigator & Yorodumi renewed

  • New versions of EM Navigator and Yorodumi started

Related info.: Changes in new EM Navigator and Yorodumi / EM Navigator (legacy version) / Yorodumi (legacy version)

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Aug 31, 2016. New EM Navigator & Yorodumi

New EM Navigator & Yorodumi

  • In 15th Sep 2016, the development versions of EM Navigator and Yorodumi will replace the official versions.
  • Current version will continue as 'legacy version' for some time.

Related info.: Changes in new EM Navigator and Yorodumi / EM Navigator / Yorodumi / EM Navigator (legacy version) / Yorodumi (legacy version)

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Apr 13, 2016. Omokage search got faster

Omokage search got faster

  • The computation time became ~1/2 compared to the previous version by re-optimization of data accession
  • Enjoy "shape similarity" of biomolecules, more!

Related info.: Omokage search

Read more

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EMN Gallery

Image gallery of 3DEM data

  • Categorization is done by EM Navigator manager manually. It is not strict.

Related info.: EMDB / PDB / EM Navigator

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