Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6VR5
DownloadVisualize
BU of 6vr5 by Molmil
Complex of HLA-A2, a class I MHC, with a p53 peptide
Descriptor: Beta-2-microglobulin, Cellular tumor antigen p53 peptide, MHC class I antigen
Authors:Wu, D, Gallagher, D.T, Pierce, B.G, Mariuzza, R.A.
Deposit date:2020-02-06
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Structural basis for oligoclonal T cell recognition of a shared p53 cancer neoantigen.
Nat Commun, 11, 2020
6VQO
DownloadVisualize
BU of 6vqo by Molmil
T cell receptor-p53-HLA-A2 complex
Descriptor: Beta-2-microglobulin, MHC class I antigen, T-cell receptor 1a2, ...
Authors:Wu, D, Gallagher, D.T, Pierce, B.G, Mariuzza, R.A.
Deposit date:2020-02-05
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for oligoclonal T cell recognition of a shared p53 cancer neoantigen.
Nat Commun, 11, 2020
6VR1
DownloadVisualize
BU of 6vr1 by Molmil
Complex of HLA-A2, a class I MHC, with a p53 peptide
Descriptor: Beta-2-microglobulin, Cellular tumor antigen p53 peptide, MHC class I antigen
Authors:Wu, D, Pierce, B.G, Gallagher, D.T, Mariuzza, R.A.
Deposit date:2020-02-06
Release date:2020-06-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Structural basis for oligoclonal T cell recognition of a shared p53 cancer neoantigen.
Nat Commun, 11, 2020
6VTH
DownloadVisualize
BU of 6vth by Molmil
p53-specific T cell receptor
Descriptor: SULFATE ION, T-cell Receptor 12-6, Alfa chain, ...
Authors:Wu, D, Gallagher, D.T, Gowthaman, R, Pierce, B.G, Mariuzza, R.A.
Deposit date:2020-02-12
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structural basis for oligoclonal T cell recognition of a shared p53 cancer neoantigen.
Nat Commun, 11, 2020
6VRN
DownloadVisualize
BU of 6vrn by Molmil
T cell receptor-p53-HLA-A2 complex
Descriptor: Beta-2-microglobulin, Cellular tumor antigen p53 peptide, MHC class I antigen, ...
Authors:Wu, D, Gallagher, D.T, Gowthaman, R, Pierce, B.G, Mariuzza, R.A.
Deposit date:2020-02-08
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structural basis for oligoclonal T cell recognition of a shared p53 cancer neoantigen.
Nat Commun, 11, 2020
6VTC
DownloadVisualize
BU of 6vtc by Molmil
p53-specific T cell receptor
Descriptor: T-cell Receptor 1a2, p53-specific T cell receptor, B-chain
Authors:Wu, D, Gallagher, D.T, Gowthaman, R, Pierce, B.G, Mariuzza, R.A.
Deposit date:2020-02-12
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural basis for oligoclonal T cell recognition of a shared p53 cancer neoantigen.
Nat Commun, 11, 2020
6VRM
DownloadVisualize
BU of 6vrm by Molmil
T cell receptor-p53-HLA-A2 complex
Descriptor: Beta-2-microglobulin, Cellular tumor antigen p53 peptide, MHC class I antigen, ...
Authors:Wu, D, Gallagher, D.T, Gowthaman, R, Pierce, B.G, Mariuzza, R.A.
Deposit date:2020-02-08
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Structural basis for oligoclonal T cell recognition of a shared p53 cancer neoantigen.
Nat Commun, 11, 2020
8DNT
DownloadVisualize
BU of 8dnt by Molmil
SARS-CoV-2 specific T cell receptor
Descriptor: Beta-2-microglobulin, MHC class I antigen alpha chain, Nucleoprotein, ...
Authors:Gallagher, D.T, Wu, D, Gowthaman, R, Pierce, B.G, Mariuzza, R.A, Weng, N.P.
Deposit date:2022-07-11
Release date:2023-07-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:SARS-CoV-2 infection establishes a stable and age-independent CD8 + T cell response against a dominant nucleocapsid epitope using restricted T cell receptors.
Nat Commun, 14, 2023
5KZP
DownloadVisualize
BU of 5kzp by Molmil
Structure of the HCV1-C1 Antibody-Antigen Complex
Descriptor: ACETATE ION, C1 Epitope, CALCIUM ION, ...
Authors:Piepenbrink, K.H, Sundberg, E.J.
Deposit date:2016-07-25
Release date:2017-07-05
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.262 Å)
Cite:Structure-Based Design of Hepatitis C Virus Vaccines That Elicit Neutralizing Antibody Responses to a Conserved Epitope.
J. Virol., 91, 2017
4L3E
DownloadVisualize
BU of 4l3e by Molmil
The complex between high affinity TCR DMF5(alpha-D26Y,beta-L98W) and human Class I MHC HLA-A2 with the bound MART-1(26-35)(A27L) peptide
Descriptor: Beta-2-microglobulin, DMF5 alpha chain, DMF5 beta chain, ...
Authors:Hellman, L.M.
Deposit date:2013-06-05
Release date:2014-06-11
Last modified:2014-08-27
Method:X-RAY DIFFRACTION (2.557 Å)
Cite:Computational design of the affinity and specificity of a therapeutic T cell receptor.
PLOS COMPUT.BIOL., 10, 2014
7S16
DownloadVisualize
BU of 7s16 by Molmil
Crystal structure of alpha-COP-WD40 domain R57A mutant
Descriptor: Coatomer subunit alpha, SODIUM ION
Authors:Dey, D, Singh, S, Khan, S, Martin, M, Schnicker, N, Gakhar, L, Pierce, B, Hasan, S.S.
Deposit date:2021-09-01
Release date:2022-02-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:An extended motif in the SARS-CoV-2 spike modulates binding and release of host coatomer in retrograde trafficking
Commun Biol, 5, 2022
7S22
DownloadVisualize
BU of 7s22 by Molmil
Crystal structure of alpha-COP-WD40 domain
Descriptor: Coatomer subunit alpha
Authors:Dey, D, Singh, S, Khan, S, Martin, M, Schnicker, N, Gakhar, L, Pierce, B, Hasan, S.S.
Deposit date:2021-09-02
Release date:2022-02-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:An extended motif in the SARS-CoV-2 spike modulates binding and release of host coatomer in retrograde trafficking
Commun Biol, 5, 2022
7S23
DownloadVisualize
BU of 7s23 by Molmil
Crystal structure of alpha-COP-WD40 domain, Y139A mutant
Descriptor: Coatomer subunit alpha
Authors:Dey, D, Singh, S, Khan, S, Martin, M, Schnicker, N, Gakhar, L, Pierce, B, Hasan, S.S.
Deposit date:2021-09-03
Release date:2022-02-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:An extended motif in the SARS-CoV-2 spike modulates binding and release of host coatomer in retrograde trafficking
Commun Biol, 5, 2022
4XVJ
DownloadVisualize
BU of 4xvj by Molmil
STRUCTURE OF THE HEPATITIS C VIRUS ENVELOPE GLYCOPROTEIN E2 ANTIGENIC 2 REGION 412-423 BOUND TO THE BROADLY NEUTRALIZING ANTIBODY HC33.1
Descriptor: HCV E2 antigen, antibody heavy chain variable domain, antibody light chain variable domain
Authors:Li, Y, Mariuzza, R.A.
Deposit date:2015-01-27
Release date:2015-03-11
Last modified:2016-12-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for penetration of the glycan shield of hepatitis C virus e2 glycoprotein by a broadly neutralizing human antibody.
J.Biol.Chem., 290, 2015
7N1A
DownloadVisualize
BU of 7n1a by Molmil
SARS-CoV-2 YLQ peptide binds to HLA-A2
Descriptor: Beta-2-microglobulin, MHC class I antigen, A-2 alpha chain, ...
Authors:Wu, D, Mariuzza, R.A.
Deposit date:2021-05-27
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.065 Å)
Cite:Structural assessment of HLA-A2-restricted SARS-CoV-2 spike epitopes recognized by public and private T-cell receptors.
Nat Commun, 13, 2022
7N1B
DownloadVisualize
BU of 7n1b by Molmil
SARS-CoV-2 RLQ peptide binds to HLA-A2
Descriptor: Beta-2-microglobulin, MHC class I antigen, A-2 alpha chain, ...
Authors:Wu, D, Mariuzza, R.A.
Deposit date:2021-05-27
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Structural assessment of HLA-A2-restricted SARS-CoV-2 spike epitopes recognized by public and private T-cell receptors.
Nat Commun, 13, 2022
7N1F
DownloadVisualize
BU of 7n1f by Molmil
SARS-CoV-2 YLQ peptide-specific TCR pYLQ7 binds to YLQ-HLA-A2
Descriptor: Beta-2-microglobulin, MHC class I antigen, A-2 alpha chain, ...
Authors:Wu, D, Mariuzza, R.A.
Deposit date:2021-05-27
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.393 Å)
Cite:Structural assessment of HLA-A2-restricted SARS-CoV-2 spike epitopes recognized by public and private T-cell receptors.
Nat Commun, 13, 2022
7N1D
DownloadVisualize
BU of 7n1d by Molmil
SARS-CoV-2 YLQ peptide-specific TCR pYLQ7
Descriptor: pYLQ7 T cell receptor alpha chain, pYLQ7 T cell receptor beta chain
Authors:Wu, D, Mariuzza, R.A.
Deposit date:2021-05-27
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural assessment of HLA-A2-restricted SARS-CoV-2 spike epitopes recognized by public and private T-cell receptors.
Nat Commun, 13, 2022
7N1E
DownloadVisualize
BU of 7n1e by Molmil
SARS-CoV-2 RLQ peptide-specific TCR pRLQ3 binds to RLQ-HLA-A2
Descriptor: Beta-2-microglobulin, MHC class I antigen, A-2 alpha chain, ...
Authors:Wu, D, Mariuzza, R.A.
Deposit date:2021-05-27
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural assessment of HLA-A2-restricted SARS-CoV-2 spike epitopes recognized by public and private T-cell receptors.
Nat Commun, 13, 2022
7N1C
DownloadVisualize
BU of 7n1c by Molmil
SARS-CoV-2 RLQ peptide-specific TCR pRLQ3
Descriptor: pRLQ3 T cell receptor alpha chain, pRLQ3 T cell receptor beta chain
Authors:Wu, D, Mariuzza, R.A.
Deposit date:2021-05-27
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.881 Å)
Cite:Structural assessment of HLA-A2-restricted SARS-CoV-2 spike epitopes recognized by public and private T-cell receptors.
Nat Commun, 13, 2022
7RM4
DownloadVisualize
BU of 7rm4 by Molmil
Neoantigen p53R175H-specific TCR 6-11 binds to p53R175H-HLA-A2
Descriptor: 6-11 T cell receptor alpha chain, 6-11 T cell receptor beta chain, Beta-2-microglobulin, ...
Authors:Wu, D, Mariuzza, R.A.
Deposit date:2021-07-26
Release date:2022-02-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.33 Å)
Cite:T cell receptors employ diverse strategies to target a p53 cancer neoantigen.
J.Biol.Chem., 298, 2022
3R8B
DownloadVisualize
BU of 3r8b by Molmil
Crystal structure of Staphylococcal Enterotoxin B in complex with an affinity matured mouse TCR VBeta8.2 protein, G5-8
Descriptor: CHLORIDE ION, Enterotoxin type B, G5-8, ...
Authors:Bonsor, D.A, Sundberg, E.J.
Deposit date:2011-03-23
Release date:2011-04-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Molecular basis of a million-fold affinity maturation process in a protein-protein interaction.
J.Mol.Biol., 411, 2011
8ENX
DownloadVisualize
BU of 8enx by Molmil
Crystal structure of beta'-COPI-WD40 domain Y33A mutant in complex with SARS-CoV-2 clientized spike tail heptapeptide.
Descriptor: Clientized spike tail heptapeptide, Coatomer subunit beta'
Authors:Dey, D, Hasan, S.S.
Deposit date:2022-09-30
Release date:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A single C-terminal residue controls SARS-CoV-2 spike trafficking and incorporation into VLPs.
Nat Commun, 14, 2023
8ENZ
DownloadVisualize
BU of 8enz by Molmil
Crystal structure of alpha-COPI-WD40 domain K15A mutant.
Descriptor: ACETYL GROUP, Putative coatomer subunit alpha
Authors:Dey, D, Hasan, S.S.
Deposit date:2022-09-30
Release date:2024-01-31
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A single C-terminal residue controls SARS-CoV-2 spike trafficking and incorporation into VLPs.
Nat Commun, 14, 2023
8ENY
DownloadVisualize
BU of 8eny by Molmil
Crystal structure of alpha-COPI-WD40 domain R13A mutant.
Descriptor: ACETYL GROUP, Putative coatomer subunit alpha
Authors:Dey, D, Hasan, S.S.
Deposit date:2022-09-30
Release date:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A single C-terminal residue controls SARS-CoV-2 spike trafficking and incorporation into VLPs.
Nat Commun, 14, 2023

 

12>

225158

PDB entries from 2024-09-18

PDB statisticsPDBj update infoContact PDBjnumon