Author results

4V4B
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STRUCTURE OF THE RIBOSOMAL 80S-EEF2-SORDARIN COMPLEX FROM YEAST OBTAINED BY DOCKING ATOMIC MODELS FOR RNA AND PROTEIN COMPONENTS INTO A 11.7 A CRYO-EM MAP.
Descriptor:18S ribosomal RNA, Elongation factor 2, 40S ribosomal protein S0-A, ...
Authors:Spahn, C.M., Gomez-Lorenzo, M.G., Grassucci, R.A., Jorgensen, R., Andersen, G.R., Beckmann, R., Penczek, P.A., Ballesta, J.P.G., Frank, J.
Deposit date:2004-01-06
Release date:2014-07-09
Last modified:2015-03-18
Method:ELECTRON MICROSCOPY (11.7 Å)
Cite:Domain movements of elongation factor eEF2 and the eukaryotic 80S ribosome facilitate tRNA translocation.
Embo J., 23, 2004
2NOQ
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STRUCTURE OF RIBOSOME-BOUND CRICKET PARALYSIS VIRUS IRES RNA
Descriptor:CrPV IRES, 18S ribosomal RNA, 25S ribosomal RNA, ...
Authors:Schuler, M., Connell, S.R., Lescoute, A., Giesebrecht, J., Dabrowski, M., Schroeer, B., Mielke, T., Penczek, P.A., Westhof, E., Spahn, C.M.T.
Deposit date:2006-10-26
Release date:2006-11-21
Last modified:2012-02-15
Method:ELECTRON MICROSCOPY (7.3 Å)
Cite:Structure of the ribosome-bound cricket paralysis virus IRES RNA.
Nat.Struct.Mol.Biol., 13, 2006
3J1Z
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INWARD-FACING CONFORMATION OF THE ZINC TRANSPORTER YIIP REVEALED BY CRYO-ELECTRON MICROSCOPY
Descriptor:Cation efflux family protein
Authors:Coudray, N., Valvo, S., Hu, M., Lasala, R., Kim, C., Vink, M., Zhou, M., Provasi, D., Filizola, M., Tao, J., Fang, J., Penczek, P.A., Ubarretxena-Belandia, I., Stokes, D.L., Transcontinental EM Initiative for Membrane Protein Structure (TEMIMPS)
Deposit date:2012-07-24
Release date:2012-10-10
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (13 Å)
Cite:Inward-facing conformation of the zinc transporter YiiP revealed by cryoelectron microscopy.
Proc.Natl.Acad.Sci.USA, 110, 2013
4A7F
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STRUCTURE OF THE ACTIN-TROPOMYOSIN-MYOSIN COMPLEX (RIGOR ATM 3)
Descriptor:ACTIN, ALPHA SKELETAL MUSCLE, TROPOMYOSIN 1 ALPHA, ...
Authors:Behrmann, E., Mueller, M., Penczek, P.A., Mannherz, H.G., Manstein, D.J., Raunser, S.
Deposit date:2011-11-14
Release date:2012-08-01
Last modified:2017-08-30
Method:ELECTRON MICROSCOPY (7.7 Å)
Cite:Structure of the Rigor Actin-Tropomyosin-Myosin Complex.
Cell(Cambridge,Mass.), 150, 2012
4A7H
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STRUCTURE OF THE ACTIN-TROPOMYOSIN-MYOSIN COMPLEX (RIGOR ATM 2)
Descriptor:ACTIN, ALPHA SKELETAL MUSCLE, TROPOMYOSIN 1-ALPHA CHAIN, ...
Authors:Behrmann, E., Mueller, M., Penczek, P.A., Mannherz, H.G., Manstein, D.J., Raunser, S.
Deposit date:2011-11-14
Release date:2012-08-01
Last modified:2017-08-30
Method:ELECTRON MICROSCOPY (7.8 Å)
Cite:Structure of the Rigor Actin-Tropomyosin-Myosin Complex.
Cell(Cambridge,Mass.), 150, 2012
4A7L
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STRUCTURE OF THE ACTIN-TROPOMYOSIN-MYOSIN COMPLEX (RIGOR ATM 1)
Descriptor:ACTIN, ALPHA SKELETON MUSCLE, TROPOMYOSIN 1 ALPHA, ...
Authors:Behrmann, E., Mueller, M., Penczek, P.A., Mannherz, H.G., Manstein, D.J., Raunser, S.
Deposit date:2011-11-14
Release date:2012-08-01
Last modified:2017-08-30
Method:ELECTRON MICROSCOPY (8.1 Å)
Cite:Structure of the Rigor Actin-Tropomyosin-Myosin Complex.
Cell(Cambridge,Mass.), 150, 2012
4A7N
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STRUCTURE OF BARE F-ACTIN FILAMENTS OBTAINED FROM THE SAME SAMPLE AS THE ACTIN-TROPOMYOSIN-MYOSIN COMPLEX
Descriptor:F-ACTIN, ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION
Authors:Behrmann, E., Mueller, M., Penczek, P.A., Mannherz, H.G., Manstein, D.J., Raunser, S.
Deposit date:2011-11-14
Release date:2012-08-01
Last modified:2017-08-30
Method:ELECTRON MICROSCOPY (8.9 Å)
Cite:Structure of the Rigor Actin-Tropomyosin-Myosin Complex.
Cell(Cambridge,Mass.), 150, 2012
4V5M
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TRNA TRANLOCATION ON THE 70S RIBOSOME: THE PRE-TRANSLOCATIONAL TRANSLOCATION INTERMEDIATE TI(PRE)
Descriptor:16S RRNA, 30S RIBOSOMAL PROTEIN S2, 30S RIBOSOMAL PROTEIN S3, ...
Authors:Ratje, A.H., Loerke, J., Mikolajka, A., Bruenner, M., Hildebrand, P.W., Starosta, A.L., Doenhoefer, A., Connell, S.R., Fucini, P., Mielke, T., Whitford, P.C., Onuchic, J.N., Yu, Y., Sanbonmatsu, K.Y., Hartmann, R.K., Penczek, P.A., Wilson, D.N., Spahn, C.M.T.
Deposit date:2010-10-01
Release date:2014-07-09
Last modified:2017-08-02
Method:ELECTRON MICROSCOPY (7.8 Å)
Cite:Head Swivel on the Ribosome Facilitates Translocation by Means of Intra-Subunit tRNA Hybrid Sites.
Nature, 468, 2010
4V5N
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TRNA TRANSLOCATION ON THE 70S RIBOSOME: THE POST- TRANSLOCATIONAL TRANSLOCATION INTERMEDIATE TI(POST)
Descriptor:16S RRNA, 30S RIBOSOMAL PROTEIN S2, 30S RIBOSOMAL PROTEIN S3, ...
Authors:Ratje, A.H., Loerke, J., Mikolajka, A., Bruenner, M., Hildebrand, P.W., Starosta, A.L., Doenhoefer, A., Connell, S.R., Fucini, P., Mielke, T., Whitford, P.C., Onuchic, J.N., Yu, Y., Sanbonmatsu, K.Y., Hartmann, R.K., Penczek, P.A., Wilson, D.N., Spahn, C.M.T.
Deposit date:2010-10-21
Release date:2014-07-09
Last modified:2017-08-02
Method:ELECTRON MICROSCOPY (7.6 Å)
Cite:Head Swivel on the Ribosome Facilitates Translocation by Means of Intra-Subunit tRNA Hybrid Sites.
Nature, 468, 2010
5AJ0
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CRYO ELECTRON MICROSCOPY OF ACTIVELY TRANSLATING HUMAN POLYSOMES (POST STATE).
Descriptor:5.8S ribosomal RNA, 5S ribosomal RNA, 60S ribosomal protein L8, ...
Authors:Behrmann, E., Loerke, J., Budkevich, T.V., Yamamoto, K., Schmidt, A., Penczek, P.A., Vos, M.R., Burger, J., Mielke, T., Scheerer, P., Spahn, C.M.T.
Deposit date:2015-02-19
Release date:2015-05-20
Last modified:2018-11-21
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural Snapshots of Actively Translating Human Ribosomes
Cell(Cambridge,Mass.), 161, 2015
6AUI
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HUMAN RIBONUCLEOTIDE REDUCTASE LARGE SUBUNIT (ALPHA) WITH DATP AND CDP
Descriptor:Ribonucleoside-diphosphate reductase large subunit, 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Brignole, E.J., Drennan, C.L., Asturias, F.J., Tsai, K.L., Penczek, P.A.
Deposit date:2017-09-01
Release date:2018-04-18
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:3.3- angstrom resolution cryo-EM structure of human ribonucleotide reductase with substrate and allosteric regulators bound.
Elife, 7, 2018
6GY7
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CRYSTAL STRUCTURE OF XAXB FROM XENORHABDUS NEMATOPHIL
Descriptor:XaxB
Authors:Schubert, E., Raunser, S., Vetter, I.R., Prumbaum, D., Penczek, P.A.
Deposit date:2018-06-28
Release date:2018-07-25
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Membrane insertion of alpha-xenorhabdolysin in near-atomic detail.
Elife, 7, 2018
3J6J
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3.6 ANGSTROM RESOLUTION MAVS FILAMENT GENERATED FROM HELICAL RECONSTRUCTION
Descriptor:Mitochondrial antiviral-signaling protein
Authors:Wu, B., Peisley, A., Li, Z., Egelman, E., Walz, T., Penczek, P., Hur, S.
Deposit date:2014-03-13
Release date:2014-07-30
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (3.64 Å)
Cite:Molecular Imprinting as a Signal-Activation Mechanism of the Viral RNA Sensor RIG-I.
Mol.Cell, 55, 2014
3J8A
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STRUCTURE OF THE F-ACTIN-TROPOMYOSIN COMPLEX
Descriptor:tropomyosin alpha-1, Actin, alpha skeletal muscle, ...
Authors:von der Ecken, J., Mueller, M., Lehman, W., Manstein, J.M., Penczek, A.P., Raunser, S.
Deposit date:2014-10-08
Release date:2014-12-10
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of the F-actin--tropomyosin complex.
Nature, 519, 2015
3J1N
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CRYO-EM MAP OF A YEAST MINIMAL PREINITIATION COMPLEX INTERACTING WITH THE MEDIATOR HEAD MODULE
Descriptor:DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB2, DNA-directed RNA polymerase II subunit RPB3, ...
Authors:Asturias, F.J., Imasaki, T.
Deposit date:2012-03-29
Release date:2013-03-06
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (16 Å)
Cite:Interaction of the mediator head module with RNA polymerase II.
Structure, 20, 2012
3J1O
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CRYO-EM MAP OF A YEAST MINIMAL PREINITIATION COMPLEX INTERACTING WITH THE MEDIATOR HEAD MODULE
Descriptor:Mediator of RNA polymerase II transcription subunit 11, Mediator of RNA polymerase II transcription subunit 17, Mediator of RNA polymerase II transcription subunit 8, ...
Authors:Asturias, F.J., Imasaki, T.
Deposit date:2012-03-29
Release date:2013-03-06
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (16 Å)
Cite:Interaction of the mediator head module with RNA polymerase II.
Structure, 20, 2012
4P4H
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CAUGHT-IN-ACTION SIGNALING COMPLEX OF RIG-I 2CARD DOMAIN AND MAVS CARD DOMAIN
Descriptor:Probable ATP-dependent RNA helicase DDX58, Mitochondrial antiviral-signaling protein, Ubiquitin-60S ribosomal protein L40
Authors:Wu, B., Hur, S.
Deposit date:2014-03-12
Release date:2014-07-30
Last modified:2015-01-07
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Molecular Imprinting as a Signal-Activation Mechanism of the Viral RNA Sensor RIG-I.
Mol.Cell, 55, 2014
4V68
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T. THERMOPHILUS 70S RIBOSOME IN COMPLEX WITH MRNA, TRNAS AND EF-TU.GDP.KIRROMYCIN TERNARY COMPLEX, FITTED TO A 6.4 A CRYO-EM MAP.
Descriptor:16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S4, ...
Authors:Schuette, J.-C., Spahn, C.M.T.
Deposit date:2008-12-11
Release date:2014-07-09
Last modified:2015-03-25
Method:ELECTRON MICROSCOPY (6.4 Å)
Cite:GTPase activation of elongation factor EF-Tu by the ribosome during decoding
Embo J., 28, 2009
5JQE
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CRYSTAL STRUCTURE OF CASPASE8 TDED
Descriptor:Sugar ABC transporter substrate-binding protein,Caspase-8 chimera
Authors:Fu, T., Li, Y., Lu, A., Wu, H.
Deposit date:2016-05-04
Release date:2016-10-26
Last modified:2018-02-21
Method:X-RAY DIFFRACTION (3.157 Å)
Cite:Cryo-EM Structure of Caspase-8 Tandem DED Filament Reveals Assembly and Regulation Mechanisms of the Death-Inducing Signaling Complex.
Mol. Cell, 64, 2016
5L08
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CRYO-EM STRUCTURE OF CASP-8 TDED FILAMENT
Descriptor:Caspase-8
Authors:Fu, T.M., Li, Y., Lu, A., Wu, H.
Deposit date:2016-07-26
Release date:2016-11-02
Last modified:2016-11-30
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Cryo-EM Structure of Caspase-8 Tandem DED Filament Reveals Assembly and Regulation Mechanisms of the Death-Inducing Signaling Complex.
Mol.Cell, 64, 2016
6GY6
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XAXAB PORE COMPLEX FROM XENORHABDUS NEMATOPHILA
Descriptor:XaxA, XaxB
Authors:Schubert, E., Raunser, S.
Deposit date:2018-06-28
Release date:2018-07-25
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Membrane insertion of alpha-xenorhabdolysin in near-atomic detail.
Elife, 7, 2018
6GY8
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CRYSTAL STRUCTURE OF XAXA FROM XENORHABDUS NEMATOPHILA
Descriptor:XaxA
Authors:Schubert, E., Raunser, S.
Deposit date:2018-06-28
Release date:2018-07-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Membrane insertion of alpha-xenorhabdolysin in near-atomic detail.
Elife, 7, 2018
5JLF
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STRUCTURE OF THE F-ACTIN-TROPOMYOSIN COMPLEX (REPROCESSED)
Descriptor:Actin, alpha skeletal muscle, Tropomyosin Alpha-1, ...
Authors:von der Ecken, J., Raunser, S.
Deposit date:2016-04-27
Release date:2016-06-15
Last modified:2018-10-17
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structure of a human cytoplasmic actomyosin complex at near-atomic resolution.
Nature, 534, 2016