Author results

3AFC
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MOUSE SEMAPHORIN 6A EXTRACELLULAR DOMAIN
Descriptor:Semaphorin-6A, N-ACETYL-D-GLUCOSAMINE
Authors:Yasui, N., Nogi, T., Mihara, E., Takagi, J.
Deposit date:2010-02-26
Release date:2010-10-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for semaphorin signalling through the plexin receptor.
Nature, 467, 2010
3AL8
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PLEXIN A2 / SEMAPHORIN 6A COMPLEX
Descriptor:Semaphorin-6A, Plexin-A2, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Nogi, T., Yasui, N., Mihara, E., Takagi, J.
Deposit date:2010-07-28
Release date:2010-10-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural basis for semaphorin signalling through the plexin receptor.
Nature, 467, 2010
3AL9
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MOUSE PLEXIN A2 EXTRACELLULAR DOMAIN
Descriptor:Plexin-A2, 1,2-ETHANEDIOL, N-ACETYL-D-GLUCOSAMINE
Authors:Nogi, T., Yasui, N., Mihara, E., Takagi, J.
Deposit date:2010-07-28
Release date:2010-10-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for semaphorin signalling through the plexin receptor.
Nature, 467, 2010
3NKM
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CRYSTAL STRUCTURE OF MOUSE AUTOTAXIN
Descriptor:Ectonucleotide pyrophosphatase/phosphodiesterase family member 2, N-ACETYL-D-GLUCOSAMINE, BETA-D-MANNOSE, ...
Authors:Nishimasu, H., Ishitani, R., Mihara, E., Takagi, J., Aoki, J., Nureki, O.
Deposit date:2010-06-20
Release date:2011-01-19
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Crystal structure of autotaxin and insight into GPCR activation by lipid mediators
Nat.Struct.Mol.Biol., 18, 2011
3NKN
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CRYSTAL STRUCTURE OF MOUSE AUTOTAXIN IN COMPLEX WITH 14:0-LPA
Descriptor:Ectonucleotide pyrophosphatase/phosphodiesterase family member 2, N-ACETYL-D-GLUCOSAMINE, BETA-D-MANNOSE, ...
Authors:Nishimasu, H., Ishitani, R., Mihara, E., Takagi, J., Aoki, J., Nureki, O.
Deposit date:2010-06-20
Release date:2011-01-19
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of autotaxin and insight into GPCR activation by lipid mediators
Nat.Struct.Mol.Biol., 18, 2011
3NKO
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CRYSTAL STRUCTURE OF MOUSE AUTOTAXIN IN COMPLEX WITH 16:0-LPA
Descriptor:Ectonucleotide pyrophosphatase/phosphodiesterase family member 2, N-ACETYL-D-GLUCOSAMINE, BETA-D-MANNOSE, ...
Authors:Nishimasu, H., Ishitani, R., Mihara, E., Takagi, J., Aoki, J., Nureki, O.
Deposit date:2010-06-20
Release date:2011-01-19
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of autotaxin and insight into GPCR activation by lipid mediators
Nat.Struct.Mol.Biol., 18, 2011
3NKP
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CRYSTAL STRUCTURE OF MOUSE AUTOTAXIN IN COMPLEX WITH 18:1-LPA
Descriptor:Ectonucleotide pyrophosphatase/phosphodiesterase family member 2, N-ACETYL-D-GLUCOSAMINE, BETA-D-MANNOSE, ...
Authors:Nishimasu, H., Ishitani, R., Mihara, E., Takagi, J., Aoki, J., Nureki, O.
Deposit date:2010-06-20
Release date:2011-01-19
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.751 Å)
Cite:Crystal structure of autotaxin and insight into GPCR activation by lipid mediators
Nat.Struct.Mol.Biol., 18, 2011
3NKQ
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CRYSTAL STRUCTURE OF MOUSE AUTOTAXIN IN COMPLEX WITH 18:3-LPA
Descriptor:Ectonucleotide pyrophosphatase/phosphodiesterase family member 2, N-ACETYL-D-GLUCOSAMINE, BETA-D-MANNOSE, ...
Authors:Nishimasu, H., Ishitani, R., Mihara, E., Takagi, J., Aoki, J., Nureki, O.
Deposit date:2010-06-20
Release date:2011-01-19
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of autotaxin and insight into GPCR activation by lipid mediators
Nat.Struct.Mol.Biol., 18, 2011
3NKR
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CRYSTAL STRUCTURE OF MOUSE AUTOTAXIN IN COMPLEX WITH 22:6-LPA
Descriptor:Ectonucleotide pyrophosphatase/phosphodiesterase family member 2, N-ACETYL-D-GLUCOSAMINE, BETA-D-MANNOSE, ...
Authors:Nishimasu, H., Ishitani, R., Mihara, E., Takagi, J., Aoki, J., Nureki, O.
Deposit date:2010-06-20
Release date:2011-01-19
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.704 Å)
Cite:Crystal structure of autotaxin and insight into GPCR activation by lipid mediators
Nat.Struct.Mol.Biol., 18, 2011
5GJE
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THREE-DIMENSIONAL RECONSTRUCTION OF HUMAN LRP6 ECTODOMAIN COMPLEXED WITH DKK1
Descriptor:Low-density lipoprotein receptor-related protein 6, Dickkopf-related protein 1, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Matoba, K., Mihara, E., Tamura-Kawakami, K., Hirai, H., Thompson, S., Iwasaki, K., Takagi, J.
Deposit date:2016-06-29
Release date:2017-01-18
Method:ELECTRON MICROSCOPY (21 Å)
Cite:Conformational Freedom of the LRP6 Ectodomain Is Regulated by N-glycosylation and the Binding of the Wnt Antagonist Dkk1
Cell Rep, 18, 2017
6AHY
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WNT SIGNALING COMPLEX
Descriptor:Frizzled-8, Proto-oncogene Wnt-3, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Hirai, H., Arimori, T., Matoba, K., Mihara, E., Takagi, J.
Deposit date:2018-08-21
Release date:2019-05-01
Last modified:2019-05-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a mammalian Wnt-frizzled complex.
Nat.Struct.Mol.Biol., 2019
3VI3
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CRYSTAL STRUCTURE OF ALPHA5BETA1 INTEGRIN HEADPIECE (LIGAND-FREE FORM)
Descriptor:Integrin alpha-5, Integrin beta-1, SG/19 Fab fragment (Light chain), ...
Authors:Nagae, M., Nogi, T., Takagi, J.
Deposit date:2011-09-21
Release date:2012-02-22
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of alpha5beta1 integrin ectodomain: Atomic details of the fibronectin receptor
J.Cell Biol., 197, 2012
3VI4
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CRYSTAL STRUCTURE OF ALPHA5BETA1 INTEGRIN HEADPIECE IN COMPLEX WITH RGD PEPTIDE
Descriptor:Integrin alpha-5, Integrin beta-1, SG/19 Fab fragment (Light chain), ...
Authors:Nagae, M., Nogi, T., Takagi, J.
Deposit date:2011-09-21
Release date:2012-02-22
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of alpha5beta1 integrin ectodomain: Atomic details of the fibronectin receptor
J.Cell Biol., 197, 2012
3WSX
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SORLA VPS10P DOMAIN IN LIGAND-FREE FORM
Descriptor:Sortilin-related receptor, N-ACETYL-D-GLUCOSAMINE, PHOSPHATE ION, ...
Authors:Kitago, Y., Nakata, Z., Nagae, M., Nogi, T., Takagi, J.
Deposit date:2014-03-30
Release date:2015-02-04
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural basis for amyloidogenic peptide recognition by sorLA
Nat.Struct.Mol.Biol., 2015
3WSY
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SORLA VPS10P DOMAIN IN COMPLEX WITH ITS OWN PROPEPTIDE FRAGMENT
Descriptor:Sortilin-related receptor, peptide from Sortilin-related receptor, N-ACETYL-D-GLUCOSAMINE
Authors:Kitago, Y., Nakata, Z., Nagae, M., Nogi, T., Takagi, J.
Deposit date:2014-03-30
Release date:2015-02-04
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Structural basis for amyloidogenic peptide recognition by sorLA
Nat.Struct.Mol.Biol., 2015
3WSZ
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SORLA VPS10P DOMAIN IN COMPLEX WITH ABETA-DERIVED PEPTIDE
Descriptor:Sortilin-related receptor, 10-mer peptide, N-ACETYL-D-GLUCOSAMINE
Authors:Kitago, Y., Nakata, Z., Nagae, M., Nogi, T., Takagi, J.
Deposit date:2014-03-30
Release date:2015-02-04
Method:X-RAY DIFFRACTION (3.201 Å)
Cite:Structural basis for amyloidogenic peptide recognition by sorLA
Nat.Struct.Mol.Biol., 2015
4GTW
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CRYSTAL STRUCTURE OF MOUSE ENPP1 IN COMPLEX WITH AMP
Descriptor:Ectonucleotide pyrophosphatase/phosphodiesterase family member 2, Alkaline phosphodiesterase I, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Kato, K., Nishimasu, H., Ishitani, R., Nureki, O.
Deposit date:2012-08-29
Release date:2012-11-07
Last modified:2018-06-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of Enpp1, an extracellular glycoprotein involved in bone mineralization and insulin signaling.
Proc.Natl.Acad.Sci.USA, 109, 2012
4GTX
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CRYSTAL STRUCTURE OF MOUSE ENPP1 IN COMPLEX WITH TMP
Descriptor:Ectonucleotide pyrophosphatase/phosphodiesterase family member 2, Alkaline phosphodiesterase I, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Kato, K., Nishimasu, H., Ishitani, R., Nureki, O.
Deposit date:2012-08-29
Release date:2012-11-07
Last modified:2018-06-20
Method:X-RAY DIFFRACTION (3.201 Å)
Cite:Crystal structure of Enpp1, an extracellular glycoprotein involved in bone mineralization and insulin signaling.
Proc.Natl.Acad.Sci.USA, 109, 2012
4GTY
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CRYSTAL STRUCTURE OF MOUSE ENPP1 IN COMPLEX WITH GMP
Descriptor:Ectonucleotide pyrophosphatase/phosphodiesterase family member 2, Alkaline phosphodiesterase I, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Kato, K., Nishimasu, H., Ishitani, R., Nureki, O.
Deposit date:2012-08-29
Release date:2012-11-07
Last modified:2018-06-20
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:Crystal structure of Enpp1, an extracellular glycoprotein involved in bone mineralization and insulin signaling.
Proc.Natl.Acad.Sci.USA, 109, 2012
4GTZ
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CRYSTAL STRUCTURE OF MOUSE ENPP1 IN COMPLEX WITH CMP
Descriptor:Ectonucleotide pyrophosphatase/phosphodiesterase family member 2, Alkaline phosphodiesterase I, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Kato, K., Nishimasu, H., Ishitani, R., Nureki, O.
Deposit date:2012-08-29
Release date:2012-11-07
Last modified:2018-06-20
Method:X-RAY DIFFRACTION (3.191 Å)
Cite:Crystal structure of Enpp1, an extracellular glycoprotein involved in bone mineralization and insulin signaling.
Proc.Natl.Acad.Sci.USA, 109, 2012
5EGE
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STRUCTURE OF ENPP6, A CHOLINE-SPECIFIC GLYCEROPHOSPHODIESTER-PHOSPHODIESTERASE
Descriptor:Ectonucleotide pyrophosphatase/phosphodiesterase family member 6, N-ACETYL-D-GLUCOSAMINE, BETA-L-FUCOSE, ...
Authors:Morita, J., Kano, K., Kato, K., Takita, H., Ishitani, R., Nishimasu, H., Nureki, O., Aoki, J.
Deposit date:2015-10-27
Release date:2016-03-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and biological function of ENPP6, a choline-specific glycerophosphodiester-phosphodiesterase
Sci Rep, 6, 2016
5EGH
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STRUCTURE OF ENPP6, A CHOLINE-SPECIFIC GLYCEROPHOSPHODIESTER-PHOSPHODIESTERASE IN COMPLEX WITH PHOSPHOCHOLINE
Descriptor:Ectonucleotide pyrophosphatase/phosphodiesterase family member 6, N-ACETYL-D-GLUCOSAMINE, BETA-L-FUCOSE, ...
Authors:Morita, J., Kano, K., Kato, K., Takita, H., Ishitani, R., Nishimasu, H., Nureki, O., Aoki, J.
Deposit date:2015-10-27
Release date:2016-03-09
Method:X-RAY DIFFRACTION (1.803 Å)
Cite:Structure and biological function of ENPP6, a choline-specific glycerophosphodiester-phosphodiesterase
Sci Rep, 6, 2016
5ZIB
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CRYSTAL STRUCTURE OF HUMAN GNT-V LUMINAL DOMAIN IN APO FORM
Descriptor:Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A, N-ACETYL-D-GLUCOSAMINE
Authors:Nagae, M., Yamaguchi, Y.
Deposit date:2018-03-14
Release date:2018-08-01
Last modified:2018-09-05
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and mechanism of cancer-associated N-acetylglucosaminyltransferase-V.
Nat Commun, 9, 2018
5ZIC
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CRYSTAL STRUCTURE OF HUMAN GNT-V LUMINAL DOMAIN IN COMPLEX WITH ACCEPTOR SUGAR
Descriptor:Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A, BETA-D-MANNOSE, 6-thio-alpha-D-mannopyranose, ...
Authors:Nagae, M., Yamaguchi, Y.
Deposit date:2018-03-14
Release date:2018-08-01
Last modified:2018-09-05
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure and mechanism of cancer-associated N-acetylglucosaminyltransferase-V.
Nat Commun, 9, 2018