Author results

2DWV
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SOLUTION STRUCTURE OF THE SECOND WW DOMAIN FROM MOUSE SALVADOR HOMOLOG 1 PROTEIN (MWW45)
Descriptor:Salvador homolog 1 protein
Authors:Ohnishi, S., Kigawa, T., Koshiba, S., Tomizawa, T., Sato, M., Tochio, N., Inoue, M., Harada, T., Watanabe, S., Guntert, P., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-17
Release date:2007-02-17
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of an atypical WW domain in a novel beta-clam-like dimeric form
Febs Lett., 581, 2007
2DWZ
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STRUCTURE OF THE ONCOPROTEIN GANKYRIN IN COMPLEX WITH S6 ATPASE OF THE 26S PROTEASOME
Descriptor:26S proteasome non-ATPase regulatory subunit 10, 26S protease regulatory subunit 6B, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
Authors:Padmanabhan, B., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-22
Release date:2007-08-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the Oncoprotein Gankyrin in Complex with S6 ATPase of the 26S Proteasome
To be Published
2DX8
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CRYSTAL STRUCTURE ANALYSIS OF THE PHD DOMAIN OF THE TRANSCRIPTION COACTIVATOR PYGOPHUS
Descriptor:Pygopus homolog 1, ZINC ION
Authors:Padmanabhan, B., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-24
Release date:2007-05-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure Analysis of the PHD Domain of the Transcription Coactivator Pygopus
To be Published
2DZN
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CRYSTAL STRUCTURE ANALYSIS OF YEAST NAS6P COMPLEXED WITH THE PROTEASOME SUBUNIT, RPT3
Descriptor:Probable 26S proteasome regulatory subunit p28, 26S protease regulatory subunit 6B homolog
Authors:Yokoyama, S., Padmanabhan, B., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-29
Release date:2007-07-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for the recognition between the regulatory particles Nas6 and Rpt3 of the yeast 26S proteasome
Biochem.Biophys.Res.Commun., 359, 2007
2E29
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SOLUTION STRUCTURE OF THE GUCT DOMAIN FROM HUMAN ATP-DEPENDENT RNA HELICASE DDX50, DEAD BOX PROTEIN 50
Descriptor:ATP-dependent RNA helicase DDX50
Authors:Ohnishi, S., Paakkonen, K., Guntert, P., Sato, M., Koshiba, S., Harada, T., Watanabe, S., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-11-10
Release date:2007-05-15
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the GUCT domain from human RNA helicase II/Gubeta reveals the RRM fold, but implausible RNA interactions
Proteins, 74, 2008
2E5S
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SOLUTION STRUCTURE OF THE ZF-CCCHX2 DOMAIN OF MUSCLEBLIND-LIKE 2, ISOFORM 1 [HOMO SAPIENS]
Descriptor:OTTHUMP00000018578, ZINC ION
Authors:Dang, W., Muto, Y., Inoue, M., Kigawa, T., Shirouzu, M., Terada, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-12-22
Release date:2007-06-26
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the RNA binding domain in the human muscleblind-like protein 2
Protein Sci., 18, 2009
2E63
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SOLUTION STRUCTURE OF THE NEUZ DOMAIN IN KIAA1787 PROTEIN
Descriptor:KIAA1787 protein
Authors:He, F., Muto, Y., Inoue, M., Kigawa, T., Shirouzu, M., Terada, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-12-25
Release date:2007-06-26
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structural and functional characterization of the NHR1 domain of the Drosophila neuralized E3 ligase in the notch signaling pathway.
J.Mol.Biol., 393, 2009
2ELL
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SOLUTION STRUCTURE OF THE LEUCINE RICH REPEAT OF HUMAN ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 FAMILY MEMBER B
Descriptor:Acidic leucine-rich nuclear phosphoprotein 32 family member B
Authors:Tochio, N., Koshiba, S., Watanabe, S., Harada, T., Umehara, T., Tanaka, A., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-27
Release date:2008-04-01
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of histone chaperone ANP32B: interaction with core histones H3-H4 through its acidic concave domain.
J.Mol.Biol., 401, 2010
2KUP
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SOLUTION STRUCTURE OF THE COMPLEX OF THE PTB DOMAIN OF SNT-2 AND 19-RESIDUE PEPTIDE (AA 1571-1589) OF HALK
Descriptor:Fibroblast growth factor receptor substrate 3, 19-residue peptide from ALK tyrosine kinase receptor
Authors:Li, H., Koshiba, S., Inoue, M., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2010-02-24
Release date:2010-05-26
Last modified:2014-02-12
Method:SOLUTION NMR
Cite:Structural basis for the recognition of nucleophosmin-anaplastic lymphoma kinase oncoprotein by the phosphotyrosine binding domain of Suc1-associated neurotrophic factor-induced tyrosine-phosphorylated target-2
J.Struct.Funct.Genom., 11, 2010
2KUQ
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SOLUTION STRUCTURE OF THE CHIMERA OF THE PTB DOMAIN OF SNT-2 AND 19-RESIDUE PEPTIDE (AA 1571-1589) OF HALK
Descriptor:Fibroblast growth factor receptor substrate 3, LINKER, 19-residue peptide from ALK tyrosine kinase receptor
Authors:Li, H., Koshiba, S., Tomizawa, T., Watanabe, S., Harada, T., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2010-02-24
Release date:2010-05-26
Last modified:2014-02-12
Method:SOLUTION NMR
Cite:Structural basis for the recognition of nucleophosmin-anaplastic lymphoma kinase oncoprotein by the phosphotyrosine binding domain of Suc1-associated neurotrophic factor-induced tyrosine-phosphorylated target-2
J.Struct.Funct.Genom., 11, 2010
2RMX
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SOLUTION STRUCTURE OF THE SHP-1 C-TERMINAL SH2 DOMAIN COMPLEXED WITH A TYROSINE-PHOSPHORYLATED PEPTIDE FROM NKG2A
Descriptor:Tyrosine-protein phosphatase non-receptor type 6, NKG2-A/NKG2-B type II integral membrane protein
Authors:Kasai, T., Koshiba, S., Inoue, M., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-11-30
Release date:2008-12-02
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structural basis for the recognition of the two NKG2A immunoreceptor tyrosine-based inhibitory motifs (ITIMs) by the C-terminal SH2 domain of protein tyrosine phosphatase SHP-1
To be Published
2RNQ
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SOLUTION STRUCTURE OF THE C-TERMINAL ACIDIC DOMAIN OF TFIIE ALPHA
Descriptor:Transcription initiation factor IIE subunit alpha
Authors:Okuda, M., Nishimura, Y.
Deposit date:2008-01-31
Release date:2008-04-01
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structural insight into the TFIIE-TFIIH interaction: TFIIE and p53 share the binding region on TFIIH
Embo J., 27, 2008
2RNR
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SOLUTION STRUCTURE OF THE COMPLEX BETWEEN TFIIE ALPHA C-TERMINAL ACIDIC DOMAIN AND TFIIH P62 PH DOMAIN
Descriptor:Transcription initiation factor IIE subunit alpha, TFIIH basal transcription factor complex p62 subunit
Authors:Okuda, M., Nishimura, Y.
Deposit date:2008-01-31
Release date:2008-04-01
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structural insight into the TFIIE-TFIIH interaction: TFIIE and p53 share the binding region on TFIIH
Embo J., 27, 2008
2ROK
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SOLUTION STRUCTURE OF THE CAP-BINDING DOMAIN OF PARN COMPLEXED WITH THE CAP ANALOG
Descriptor:poly(A)-specific ribonuclease, 7N-METHYL-8-HYDROGUANOSINE-5'-MONOPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE
Authors:Nagata, T., Suzuki, S., Endo, R., Shirouzu, M., Terada, T., Inoue, M., Kigawa, T., Guntert, P., Hayashizaki, Y., Muto, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-03-28
Release date:2009-02-10
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:The RRM domain of poly(A)-specific ribonuclease has a noncanonical binding site for mRNA cap analog recognition.
Nucleic Acids Res., 36, 2008
2ROZ
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STRUCTURE OF THE C-TERMINAL PID DOMAIN OF FE65L1 COMPLEXED WITH THE CYTOPLASMIC TAIL OF APP REVEALS A NOVEL PEPTIDE BINDING MODE
Descriptor:peptide from Amyloid beta A4 protein, Amyloid beta A4 precursor protein-binding family B member 2
Authors:Li, H., Koshiba, S., Tochio, N., Watanabe, S., Harada, T., Inoue, M., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-04-25
Release date:2008-07-22
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of the C-terminal phosphotyrosine interaction domain of Fe65L1 complexed with the cytoplasmic tail of amyloid precursor protein reveals a novel peptide binding mode
J.Biol.Chem., 283, 2008
2RPJ
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SOLUTION STRUCTURE OF FN14 CRD DOMAIN
Descriptor:Tumor necrosis factor receptor superfamily member 12A
Authors:He, F., Dang, W., Muto, Y., Inoue, M., Kigawa, T., Shirouzu, M., Terada, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-05-19
Release date:2009-03-24
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the cysteine-rich domain in Fn14, a member of the tumor necrosis factor receptor superfamily
Protein Sci., 18, 2009
2RPP
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SOLUTION STRUCTURE OF TANDEM ZINC FINGER DOMAIN 12 IN MUSCLEBLIND-LIKE PROTEIN 2
Descriptor:Muscleblind-like protein 2, ZINC ION
Authors:Abe, C., Dang, W., Tsuda, K., Muto, Y., Inoue, M., Kigawa, T., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-06-24
Release date:2009-05-12
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the RNA binding domain in the human muscleblind-like protein 2
Protein Sci., 18, 2009
2RQ4
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REFINEMENT OF RNA BINDING DOMAIN 3 IN CUG TRIPLET REPEAT RNA-BINDING PROTEIN 1
Descriptor:CUG-BP- and ETR-3-like factor 1
Authors:Tsuda, K., Kuwasako, K., Takahashi, M., Someya, T., Inoue, M., Terada, T., Kobayashi, N., Shirouzu, M., Kigawa, T., Guntert, P., Muto, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-01-19
Release date:2009-08-04
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structural basis for the sequence-specific RNA-recognition mechanism of human CUG-BP1 RRM3
Nucleic Acids Res., 2009
2RQC
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SOLUTION STRUCTURE OF RNA-BINDING DOMAIN 3 OF CUGBP1 IN COMPLEX WITH RNA (UG)3
Descriptor:CUG-BP- and ETR-3-like factor 1, 5'-R(*UP*GP*UP*GP*UP*G)-3'
Authors:Tsuda, K., Kuwasako, K., Takahashi, M., Someya, T., Muto, Y., Inoue, M., Kigawa, T., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-04-09
Release date:2009-08-04
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structural basis for the sequence-specific RNA-recognition mechanism of human CUG-BP1 RRM3
Nucleic Acids Res., 37, 2009
2RR6
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SOLUTION STRUCTURE OF THE LEUCINE RICH REPEAT OF HUMAN ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 FAMILY MEMBER B
Descriptor:Acidic leucine-rich nuclear phosphoprotein 32 family member B
Authors:Tochio, N., Umehara, T., Tsuda, K., Koshiba, S., Harada, T., Watanabe, S., Tanaka, A., Kigawa, T., Yokoyama, S.
Deposit date:2010-05-25
Release date:2010-06-09
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of histone chaperone ANP32B: interaction with core histones H3-H4 through its acidic concave domain.
J.Mol.Biol., 401, 2010
2RRA
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SOLUTION STRUCTURE OF RNA BINDING DOMAIN IN HUMAN TRA2 BETA PROTEIN IN COMPLEX WITH RNA (GAAGAA)
Descriptor:cDNA FLJ40872 fis, clone TUTER2000283, highly similar to Homo sapiens transformer-2-beta (SFRS10) gene, ...
Authors:Tsuda, K., Kuwasako, K., Takahashi, M., Someya, T., Inoue, M., Kigawa, T., Terada, T., Shirouzu, M., Sugano, S., Muto, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2010-06-17
Release date:2011-04-27
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structural basis for the dual RNA-recognition modes of human Tra2-beta RRM.
Nucleic Acids Res., 39, 2011
2RRB
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REFINEMENT OF RNA BINDING DOMAIN IN HUMAN TRA2 BETA PROTEIN
Descriptor:cDNA FLJ40872 fis, clone TUTER2000283, highly similar to Homo sapiens transformer-2-beta (SFRS10) gene
Authors:Tsuda, K., Kuwasako, K., Takahashi, M., Someya, T., Inoue, M., Kigawa, T., Terada, T., Shirouzu, M., Sugano, S., Muto, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2010-06-17
Release date:2011-04-27
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structural basis for the dual RNA-recognition modes of human Tra2-beta RRM.
Nucleic Acids Res., 39, 2011
2YS5
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SOLUTION STRUCTURE OF THE COMPLEX OF THE PTB DOMAIN OF SNT-2 AND 19-RESIDUE PEPTIDE (AA 1571-1589) OF HALK
Descriptor:Fibroblast growth factor receptor substrate 3, ALK tyrosine kinase receptor
Authors:Li, H., Koshiba, S., Inoue, M., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-03
Release date:2008-04-08
Last modified:2014-02-12
Method:SOLUTION NMR
Cite:Structural basis for the recognition of nucleophosmin-anaplastic lymphoma kinase oncoprotein by the phosphotyrosine binding domain of Suc1-associated neurotrophic factor-induced tyrosine-phosphorylated target-2
J.Struct.Funct.Genom., 11, 2010
2YSZ
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SOLUTION STRUCTURE OF THE CHIMERA OF THE C-TERMINAL PID DOMAIN OF FE65L AND THE C-TERMINAL TAIL PEPTIDE OF APP
Descriptor:Amyloid beta A4 precursor protein-binding family B member 2 and Amyloid beta A4 protein
Authors:Li, H., Koshiba, S., Watanabe, S., Harada, T., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-05
Release date:2008-04-08
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of the C-terminal phosphotyrosine interaction domain of Fe65L1 complexed with the cytoplasmic tail of amyloid precursor protein reveals a novel peptide binding mode
J.Biol.Chem., 283, 2008
2YT0
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SOLUTION STRUCTURE OF THE CHIMERA OF THE C-TERMINAL TAIL PEPTIDE OF APP AND THE C-TERMINAL PID DOMAIN OF FE65L
Descriptor:Amyloid beta A4 protein and Amyloid beta A4 precursor protein-binding family B member 2
Authors:Li, H., Koshiba, S., Tochio, N., Watanabe, S., Harada, T., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-05
Release date:2008-04-08
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of the C-terminal phosphotyrosine interaction domain of Fe65L1 complexed with the cytoplasmic tail of amyloid precursor protein reveals a novel peptide binding mode
J.Biol.Chem., 283, 2008