Author results

2KBK
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SOLUTION STRUCTURE OF BMK-M10
Descriptor:Neurotoxin BmK-M10
Authors:Zhu, J., Wu, H.
Deposit date:2008-11-28
Release date:2009-12-22
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution Structure of BmK-M10
To be Published
2P17
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CRYSTAL STRUCTURE OF GK1651 FROM GEOBACILLUS KAUSTOPHILUS
Descriptor:Pirin-like protein, FE (III) ION
Authors:Zhu, J., Swindell II, J.T., Chen, L., Ebihara, A., Shinkai, A., Kuramitsu, S., Yokoyama, S., Fu, Z.-Q., Rose, J.P., Wang, B.C., Southeast Collaboratory for Structural Genomics (SECSG), RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-02
Release date:2007-05-01
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Crystal structure of GK1651 from Geobacillus kaustophilus
To be Published
2P3E
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CRYSTAL STRUCTURE OF AQ1208 FROM AQUIFEX AEOLICUS
Descriptor:Diaminopimelate decarboxylase
Authors:Zhu, J., Swindell II, J.T., Chen, L., Ebihara, A., Shinkai, A., Kuramitsu, S., Yokoyama, S., Fu, Z.-Q., Rose, J.P., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG), RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-08
Release date:2007-05-01
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:To be Published
To be Published
3FCS
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STRUCTURE OF COMPLETE ECTODOMAIN OF INTEGRIN AIIBB3
Descriptor:Integrin, alpha 2b, Integrin beta-3, ...
Authors:Zhu, J., Luo, B.-H., Xiao, T., Zhang, C., Nishida, N., Springer, T.A.
Deposit date:2008-11-22
Release date:2009-01-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structure of a complete integrin ectodomain in a physiologic resting state and activation and deactivation by applied forces.
Mol.Cell, 32, 2008
3FCU
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STRUCTURE OF HEADPIECE OF INTEGRIN AIIBB3 IN OPEN CONFORMATION
Descriptor:Integrin, alpha 2b, Integrin beta-3, ...
Authors:Zhu, J., Luo, B.-H., Xiao, T., Zhang, C., Nishida, N., Springer, T.A.
Deposit date:2008-11-22
Release date:2009-01-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of a complete integrin ectodomain in a physiologic resting state and activation and deactivation by applied forces.
Mol.Cell, 32, 2008
3RO3
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CRYSTAL STRUCTURE OF LGN/MINSCUTEABLE COMPLEX
Descriptor:G-protein-signaling modulator 2, peptide of Protein inscuteable homolog, GLYCEROL, ...
Authors:Zhu, J., Wen, W., Shang, Y., Wei, Z., Pan, Z., Wang, W., Zhang, M.
Deposit date:2011-04-25
Release date:2012-03-07
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:LGN/mInsc and LGN/NuMA complex structures suggest distinct functions in asymmetric cell division for the Par3/mInsc/LGN and G[alpha]i/LGN/NuMA pathways
Mol.Cell, 43, 2011
4HTX
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CRYSTAL STRUCTURE OF PDE2 CATALYTIC DOMAIN IN COMPLEX WITH BAY60-7550
Descriptor:cGMP-dependent 3',5'-cyclic phosphodiesterase, ZINC ION, MAGNESIUM ION, ...
Authors:Zhu, J., Huang, Q.
Deposit date:2012-11-02
Release date:2013-08-28
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:X-ray Crystal Structure of Phosphodiesterase 2 in Complex with a Highly Selective, Nanomolar Inhibitor Reveals a Binding-Induced Pocket Important for Selectivity.
J.Am.Chem.Soc., 135, 2013
4HTZ
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CRYSTAL STRUCTURE OF PDE2 CATALYTIC DOMAIN IN SPACE GROUP P1
Descriptor:cGMP-dependent 3',5'-cyclic phosphodiesterase, ZINC ION, MAGNESIUM ION
Authors:Zhu, J., Huang, Q.
Deposit date:2012-11-02
Release date:2013-08-28
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray Crystal Structure of Phosphodiesterase 2 in Complex with a Highly Selective, Nanomolar Inhibitor Reveals a Binding-Induced Pocket Important for Selectivity.
J.Am.Chem.Soc., 135, 2013
4V83
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CRYSTAL STRUCTURE OF A COMPLEX CONTAINING DOMAIN 3 FROM THE PSIV IGR IRES RNA BOUND TO THE 70S RIBOSOME.
Descriptor:ribosomal RNA 16S, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Zhu, J., Korostelev, A., Costantino, D., Noller, H.F., Kieft, J.S.
Deposit date:2010-12-13
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystal structures of complexes containing domains from two viral internal ribosome entry site (IRES) RNAs bound to the 70S ribosome.
Proc.Natl.Acad.Sci.USA, 108, 2011
4V84
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CRYSTAL STRUCTURE OF A COMPLEX CONTAINING DOMAIN 3 OF CRPV IGR IRES RNA BOUND TO THE 70S RIBOSOME.
Descriptor:ribosomal RNA 16S, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Zhu, J., Korostelev, A., Costantino, D., Noller, H.F., Kieft, J.S.
Deposit date:2010-12-13
Release date:2014-07-09
Last modified:2018-04-11
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal structures of complexes containing domains from two viral internal ribosome entry site (IRES) RNAs bound to the 70S ribosome.
Proc.Natl.Acad.Sci.USA, 108, 2011
4YLM
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STRUCTURE OF PVCB, AN FE, ALPHA-KETOGLUTARATE DEPENDENT OXYGENASE FROM AN ISONITRILE SYNTHETIC PATHWAY
Descriptor:Pyoverdine biosynthesis protein PvcB, GLYCEROL
Authors:Zhu, J., Lippa, G.M., Gulick, A.M., Tipton, P.A.
Deposit date:2015-03-05
Release date:2015-04-29
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Examining Reaction Specificity in PvcB, a Source of Diversity in Isonitrile-Containing Natural Products.
Biochemistry, 54, 2015
5C7N
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CRYSTAL STRUCTURE OF THE HUMAN BRPF1 BROMODOMAIN IN COMPLEX WITH BROMOSPORINE
Descriptor:Peregrin, Bromosporine, NITRATE ION
Authors:Zhu, J., Caflisch, A.
Deposit date:2015-06-24
Release date:2015-07-08
Last modified:2016-06-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Twenty Crystal Structures of Bromodomain and PHD Finger Containing Protein 1 (BRPF1)/Ligand Complexes Reveal Conserved Binding Motifs and Rare Interactions.
J.Med.Chem., 59, 2016
5C85
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CRYSTAL STRUCTURE OF THE HUMAN BRPF1 BROMODOMAIN IN COMPLEX WITH SEED1
Descriptor:Peregrin, NITRATE ION, 6-bromo-3,4-dihydroquinoxalin-2(1H)-one
Authors:Zhu, J., Caflisch, A.
Deposit date:2015-06-25
Release date:2016-05-25
Last modified:2016-06-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Twenty Crystal Structures of Bromodomain and PHD Finger Containing Protein 1 (BRPF1)/Ligand Complexes Reveal Conserved Binding Motifs and Rare Interactions.
J.Med.Chem., 59, 2016
5C87
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CRYSTAL STRUCTURE OF THE HUMAN BRPF1 BROMODOMAIN IN COMPLEX WITH SEED2
Descriptor:Peregrin, NITRATE ION, isoquinolin-1(2H)-one
Authors:Zhu, J., Caflisch, A.
Deposit date:2015-06-25
Release date:2016-05-25
Last modified:2016-06-22
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Twenty Crystal Structures of Bromodomain and PHD Finger Containing Protein 1 (BRPF1)/Ligand Complexes Reveal Conserved Binding Motifs and Rare Interactions.
J.Med.Chem., 59, 2016
5C89
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CRYSTAL STRUCTURE OF THE HUMAN BRPF1 BROMODOMAIN IN COMPLEX WITH 917
Descriptor:Peregrin, 1-ethyl-8-methoxy-5-methyl[1,2,4]triazolo[4,3-a]quinoline
Authors:Zhu, J., Wiedmer, L., Caflisch, A.
Deposit date:2015-06-25
Release date:2016-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of the human BRPF1 bromodomain in complex with 917
To Be Published
5DY7
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CRYSTAL STRUCTURE OF THE HUMAN BRPF1 BROMODOMAIN IN COMPLEX WITH SEED4
Descriptor:Peregrin, 7-(trifluoromethyl)-3,4-dihydroquinoxalin-2(1H)-one, NITRATE ION
Authors:Zhu, J., Caflisch, A.
Deposit date:2015-09-24
Release date:2016-05-25
Last modified:2016-06-22
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Twenty Crystal Structures of Bromodomain and PHD Finger Containing Protein 1 (BRPF1)/Ligand Complexes Reveal Conserved Binding Motifs and Rare Interactions.
J.Med.Chem., 59, 2016
5DYA
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CRYSTAL STRUCTURE OF THE HUMAN BRPF1 BROMODOMAIN IN COMPLEX WITH SEED5
Descriptor:Peregrin, NITRATE ION, (2R)-2-ethyl-3-oxo-1,2,3,4-tetrahydroquinoxaline-6-carboxylic acid
Authors:Zhu, J., Caflisch, A.
Deposit date:2015-09-24
Release date:2016-05-25
Last modified:2016-06-22
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Twenty Crystal Structures of Bromodomain and PHD Finger Containing Protein 1 (BRPF1)/Ligand Complexes Reveal Conserved Binding Motifs and Rare Interactions.
J.Med.Chem., 59, 2016
5DYC
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CRYSTAL STRUCTURE OF THE HUMAN BRPF1 BROMODOMAIN IN COMPLEX WITH SEED6
Descriptor:Peregrin, NITRATE ION, 7-bromo-3,4-dihydroquinoxalin-2(1H)-one
Authors:Zhu, J., Caflisch, A.
Deposit date:2015-09-24
Release date:2016-05-25
Last modified:2016-06-22
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Twenty Crystal Structures of Bromodomain and PHD Finger Containing Protein 1 (BRPF1)/Ligand Complexes Reveal Conserved Binding Motifs and Rare Interactions.
J.Med.Chem., 59, 2016
5E3D
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CRYSTAL STRUCTURE OF THE HUMAN BRPF1 BROMODOMAIN IN COMPLEX WITH SEED7
Descriptor:Peregrin, 2,8-dithioxo-1,2,3,7,8,9-hexahydro-6H-purin-6-one, NITRATE ION
Authors:Zhu, J., Caflisch, A.
Deposit date:2015-10-02
Release date:2016-05-25
Last modified:2016-06-22
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Twenty Crystal Structures of Bromodomain and PHD Finger Containing Protein 1 (BRPF1)/Ligand Complexes Reveal Conserved Binding Motifs and Rare Interactions.
J.Med.Chem., 59, 2016
5E3G
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CRYSTAL STRUCTURE OF THE HUMAN BRPF1 BROMODOMAIN IN COMPLEX WITH SEED8
Descriptor:Peregrin, 2-thioxo-2,3,7,9-tetrahydro-1H-purine-6,8-dione, NITRATE ION
Authors:Zhu, J., Caflisch, A.
Deposit date:2015-10-02
Release date:2016-05-25
Last modified:2016-06-22
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Twenty Crystal Structures of Bromodomain and PHD Finger Containing Protein 1 (BRPF1)/Ligand Complexes Reveal Conserved Binding Motifs and Rare Interactions.
J.Med.Chem., 59, 2016
5EM3
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CRYSTAL STRUCTURE OF THE HUMAN BRPF1 BROMODOMAIN IN COMPLEX WITH SEED9
Descriptor:Peregrin, quinolin-5-ol, NITRATE ION
Authors:Zhu, J., Caflisch, A.
Deposit date:2015-11-05
Release date:2016-06-08
Last modified:2016-06-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Twenty Crystal Structures of Bromodomain and PHD Finger Containing Protein 1 (BRPF1)/Ligand Complexes Reveal Conserved Binding Motifs and Rare Interactions.
J.Med.Chem., 59, 2016
5EPR
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CRYSTAL STRUCTURE OF THE HUMAN BRPF1 BROMODOMAIN IN COMPLEX WITH SEED11
Descriptor:Peregrin, (3~{S})-3-methyl-3,4-dihydro-1~{H}-quinoxalin-2-one, NITRATE ION
Authors:Zhu, J., Caflisch, A.
Deposit date:2015-11-12
Release date:2016-05-25
Last modified:2016-06-22
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Twenty Crystal Structures of Bromodomain and PHD Finger Containing Protein 1 (BRPF1)/Ligand Complexes Reveal Conserved Binding Motifs and Rare Interactions.
J.Med.Chem., 59, 2016
5EPS
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CRYSTAL STRUCTURE OF THE HUMAN BRPF1 BROMODOMAIN IN COMPLEX WITH SEED10
Descriptor:Peregrin, 1-methyl-3,4-dihydroquinoxalin-2-one, NITRATE ION
Authors:Zhu, J., Caflisch, A.
Deposit date:2015-11-12
Release date:2016-05-25
Last modified:2016-06-22
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Twenty Crystal Structures of Bromodomain and PHD Finger Containing Protein 1 (BRPF1)/Ligand Complexes Reveal Conserved Binding Motifs and Rare Interactions.
J.Med.Chem., 59, 2016
5EQ1
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CRYSTAL STRUCTURE OF THE HUMAN BRPF1 BROMODOMAIN IN COMPLEX WITH SEED12
Descriptor:Peregrin, 5-METHYL-1,2,4-TRIAZOLO[3,4-B]BENZOTHIAZOLE, NITRATE ION
Authors:Zhu, J., Caflisch, A.
Deposit date:2015-11-12
Release date:2016-05-25
Last modified:2016-06-22
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Twenty Crystal Structures of Bromodomain and PHD Finger Containing Protein 1 (BRPF1)/Ligand Complexes Reveal Conserved Binding Motifs and Rare Interactions.
J.Med.Chem., 59, 2016
5ETB
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CRYSTAL STRUCTURE OF THE HUMAN BRPF1 BROMODOMAIN IN COMPLEX WITH SEED13
Descriptor:Peregrin, 1-(7-methyl-1~{H}-indol-3-yl)ethanone, NITRATE ION
Authors:Zhu, J., Caflisch, A.
Deposit date:2015-11-17
Release date:2016-05-25
Last modified:2017-09-06
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Twenty Crystal Structures of Bromodomain and PHD Finger Containing Protein 1 (BRPF1)/Ligand Complexes Reveal Conserved Binding Motifs and Rare Interactions.
J.Med.Chem., 59, 2016