7Y0I
| Solution structures of ASH1L PHD domain in complex with H3K4me2 peptide | Descriptor: | ALA-ARG-THR-MLY-GLN-THR-ALA-ARG-LYS-SER-THR-GLY-GLY-LYS-ALA, Histone-lysine N-methyltransferase ASH1L, ZINC ION | Authors: | Yu, M, Zeng, L. | Deposit date: | 2022-06-05 | Release date: | 2022-10-12 | Method: | SOLUTION NMR | Cite: | Structural insight into ASH1L PHD finger recognizing methylated histone H3K4 and promoting cell growth in prostate cancer. Front Oncol, 12, 2022
|
|
2MUM
| Solution structure of the PHD domain of Yeast YNG2 | Descriptor: | Chromatin modification-related protein YNG2, ZINC ION | Authors: | Taeb, S, Kaustov, L, Lemak, A, Farhadi, S, Sheng, Y. | Deposit date: | 2014-09-12 | Release date: | 2014-12-24 | Last modified: | 2023-06-14 | Method: | SOLUTION NMR | Cite: | Solution structure of the PHD domain of Yeast YNG2 To be Published
|
|
7ZEW
| Complex Cyp33-RRM : AAUAAA RNA | Descriptor: | Peptidyl-prolyl cis-trans isomerase E, RNA (5'-R(*AP*AP*UP*AP*AP*A)-3') | Authors: | Blatter, M, Allain, F, Meylan, C. | Deposit date: | 2022-03-31 | Release date: | 2022-04-13 | Last modified: | 2023-05-03 | Method: | SOLUTION NMR | Cite: | RNA binding induces an allosteric switch in Cyp33 to repress MLL1-mediated transcription. Sci Adv, 9, 2023
|
|
7ZEZ
| Trimolecular complex Cyp33-RRMdelta alpha : MLL1-PHD3 : H3K4me3 | Descriptor: | Histone H3, Isoform 3 of Peptidyl-prolyl cis-trans isomerase E, MLL cleavage product N320, ... | Authors: | Blatter, M, Allain, F, Meylan, C. | Deposit date: | 2022-03-31 | Release date: | 2022-04-13 | Last modified: | 2023-05-03 | Method: | SOLUTION NMR | Cite: | RNA binding induces an allosteric switch in Cyp33 to repress MLL1-mediated transcription. Sci Adv, 9, 2023
|
|
7ZEV
| Free form of extended Cyp33-RRM | Descriptor: | Peptidyl-prolyl cis-trans isomerase E | Authors: | Blatter, M, Allain, F, Meylan, C. | Deposit date: | 2022-03-31 | Release date: | 2022-04-13 | Last modified: | 2023-05-03 | Method: | SOLUTION NMR | Cite: | RNA binding induces an allosteric switch in Cyp33 to repress MLL1-mediated transcription. Sci Adv, 9, 2023
|
|
7ZEX
| Complex Cyp33-RRMdelta alpha : UAAUGUCG RNA | Descriptor: | Isoform 3 of Peptidyl-prolyl cis-trans isomerase E, RNA (5'-R(*UP*AP*AP*UP*GP*UP*CP*G)-3') | Authors: | Blatter, M, Allain, F, Meylan, C. | Deposit date: | 2022-03-31 | Release date: | 2022-05-04 | Last modified: | 2023-05-03 | Method: | SOLUTION NMR | Cite: | RNA binding induces an allosteric switch in Cyp33 to repress MLL1-mediated transcription. Sci Adv, 9, 2023
|
|
1WEN
| Solution structure of PHD domain in ING1-like protein BAC25079 | Descriptor: | ZINC ION, inhibitor of growth family, member 4; ING1-like protein | Authors: | He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-05-25 | Release date: | 2004-11-25 | Last modified: | 2022-03-02 | Method: | SOLUTION NMR | Cite: | Solution structure of PHD domain in ING1-like protein BAC25079 To be Published
|
|
7ZEY
| Complex Cyp33-RRM : MLL1-PHD3 | Descriptor: | MLL cleavage product N320, Peptidyl-prolyl cis-trans isomerase E, ZINC ION | Authors: | Blatter, M, Allain, F, Meylan, C. | Deposit date: | 2022-03-31 | Release date: | 2022-04-13 | Last modified: | 2023-06-14 | Method: | SOLUTION NMR | Cite: | RNA binding induces an allosteric switch in Cyp33 to repress MLL1-mediated transcription. Sci Adv, 9, 2023
|
|
1WEU
| Solution structure of PHD domain in ING1-like protein BAC25009 | Descriptor: | ZINC ION, inhibitor of growth family, member 4 | Authors: | He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-05-25 | Release date: | 2004-11-25 | Last modified: | 2022-03-02 | Method: | SOLUTION NMR | Cite: | Solution structure of PHD domain in ING1-like protein BAC25009 To be Published
|
|
1WE9
| Solution structure of PHD domain in nucleic acid binding protein-like NP_197993 | Descriptor: | PHD finger family protein, ZINC ION | Authors: | He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-05-24 | Release date: | 2004-11-24 | Last modified: | 2022-03-02 | Method: | SOLUTION NMR | Cite: | Solution structure of PHD domain in nucleic acid binding protein-like NP_197993 To be Published
|
|
6L87
| |
1WES
| Solution structure of PHD domain in inhibitor of growth family, member 1-like | Descriptor: | ZINC ION, inhibitor of growth family, member 1-like | Authors: | He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-05-25 | Release date: | 2004-11-25 | Last modified: | 2022-03-02 | Method: | SOLUTION NMR | Cite: | Solution structure of PHD domain in inhibitor of growth family, member 1-like To be Published
|
|
1X4I
| Solution structure of PHD domain in inhibitor of growth protein 3 (ING3) | Descriptor: | Inhibitor of growth protein 3, ZINC ION | Authors: | He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2005-05-14 | Release date: | 2005-11-14 | Last modified: | 2022-03-02 | Method: | SOLUTION NMR | Cite: | Solution structure of PHD domain in inhibitor of growth protein 3 (ING3) To be Published
|
|
2K1J
| Plan homeodomain finger of tumour supressor ING4 | Descriptor: | Inhibitor of growth protein 4, ZINC ION | Authors: | Palacios, A, Garcia, P, Padro, D, Lopez-Hernandez, E, Blanco, F.J. | Deposit date: | 2008-03-05 | Release date: | 2008-04-15 | Last modified: | 2022-03-16 | Method: | SOLUTION NMR | Cite: | Solution structure and NMR characterization of the binding to methylated histone tails of the plant homeodomain finger of the tumour suppressor ING4. Febs Lett., 580, 2006
|
|
2K16
| Solution structure of the free TAF3 PHD domain | Descriptor: | Transcription initiation factor TFIID subunit 3, ZINC ION | Authors: | van Ingen, H, van Schaik, F.M.A, Wienk, H, Timmers, M, Boelens, R. | Deposit date: | 2008-02-22 | Release date: | 2008-07-15 | Last modified: | 2023-06-14 | Method: | SOLUTION NMR | Cite: | Recognition of the H3K4me3 mark by the TAF3-PHD finger To be Published
|
|
2K17
| Solution structure of the TAF3 PHD domain in complex with a H3K4me3 peptide | Descriptor: | H3K4me3 peptide, Transcription initiation factor TFIID subunit 3, ZINC ION | Authors: | van Ingen, H, van Schaik, F.M.A, Wienk, H, Timmers, M, Boelens, R. | Deposit date: | 2008-02-22 | Release date: | 2008-07-15 | Last modified: | 2023-06-14 | Method: | SOLUTION NMR | Cite: | Recognition of the H3K4me3 mark by the TAF3-PHD finger To be Published
|
|
2JMI
| NMR solution structure of PHD finger fragment of Yeast Yng1 protein in free state | Descriptor: | Protein YNG1, ZINC ION | Authors: | Ilin, S, Taverna, S.D, Rogers, R.S, Tanny, J.C, Lavender, H, Li, H, Baker, L, Boyle, J, Blair, L.P, Chait, B.T, Patel, D.J, Aitchison, J.D, Tackett, A.J, Allis, C.D. | Deposit date: | 2006-11-15 | Release date: | 2007-07-03 | Last modified: | 2023-12-20 | Method: | SOLUTION NMR | Cite: | Yng1 PHD finger binding to H3 trimethylated at K4 promotes NuA3 HAT activity at K14 of H3 and transcription at a subset of targeted ORFs Mol.Cell, 24, 2006
|
|
2JMJ
| NMR solution structure of the PHD domain from the yeast YNG1 protein in complex with H3(1-9)K4me3 peptide | Descriptor: | Histone H3, Protein YNG1, ZINC ION | Authors: | Ilin, S, Taverna, S.D, Rogers, R.S, Tanny, J.C, Lavender, H, Li, H, Baker, L, Boyle, J, Blair, L.P, Chait, B.T, Patel, D.J, Aitchison, J.D, Tackett, A.J, Allis, C.D. | Deposit date: | 2006-11-15 | Release date: | 2007-07-03 | Last modified: | 2023-12-20 | Method: | SOLUTION NMR | Cite: | Yng1 PHD finger binding to H3 trimethylated at K4 promotes NuA3 HAT activity at K14 of H3 and transcription at a subset of targeted ORFs Mol.Cell, 24, 2006
|
|
2KGG
| |
2KGI
| |
2KYX
| Solution structure of the RRM domain of CYP33 | Descriptor: | Peptidyl-prolyl cis-trans isomerase E | Authors: | Park, S, Bushweller, J.H. | Deposit date: | 2010-06-09 | Release date: | 2010-08-25 | Last modified: | 2023-06-14 | Method: | SOLUTION NMR | Cite: | The PHD3 domain of MLL acts as a CYP33-regulated switch between MLL-mediated activation and repression . Biochemistry, 49, 2010
|
|
2KU7
| |
2KYU
| The solution structure of the PHD3 finger of MLL | Descriptor: | Histone-lysine N-methyltransferase MLL, ZINC ION | Authors: | Park, S, Bushweller, J.H. | Deposit date: | 2010-06-08 | Release date: | 2010-08-25 | Last modified: | 2020-02-05 | Method: | SOLUTION NMR | Cite: | The PHD3 domain of MLL acts as a CYP33-regulated switch between MLL-mediated activation and repression. Biochemistry, 49, 2010
|
|
2RR4
| Complex structure of the zf-CW domain and the H3K4me3 peptide | Descriptor: | Histone H3, ZINC ION, Zinc finger CW-type PWWP domain protein 1 | Authors: | He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2010-03-24 | Release date: | 2010-09-15 | Last modified: | 2011-07-13 | Method: | SOLUTION NMR | Cite: | Structural insight into the zinc finger CW domain as a histone modification reader Structure, 18, 2010
|
|
2RSD
| Solution structure of the plant homeodomain (PHD) of the E3 SUMO ligase Siz1 from rice | Descriptor: | E3 SUMO-protein ligase SIZ1, ZINC ION | Authors: | Shindo, H, Tsuchiya, W, Suzuki, R, Yamazaki, T. | Deposit date: | 2012-01-12 | Release date: | 2012-08-15 | Last modified: | 2023-06-14 | Method: | SOLUTION NMR | Cite: | PHD finger of the SUMO ligase Siz/PIAS family in rice reveals specific binding for methylated histone H3 at lysine 4 and arginine 2 Febs Lett., 586, 2012
|
|