2JMJ

NMR solution structure of the PHD domain from the yeast YNG1 protein in complex with H3(1-9)K4me3 peptide

Summary for 2JMJ

Related2JMI
DescriptorProtein YNG1, Histone H3, ZINC ION (3 entities in total)
Functional Keywordshistone, phd, h3k4me3, complex, protein binding
Biological sourceSaccharomyces cerevisiae (baker's yeast)
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Cellular locationNucleus Q08465 P61830
Total number of polymer chains2
Total molecular weight11505.79
Authors
Ilin, S.,Taverna, S.D.,Rogers, R.S.,Tanny, J.C.,Lavender, H.,Li, H.,Baker, L.,Boyle, J.,Blair, L.P.,Chait, B.T.,Patel, D.J.,Aitchison, J.D.,Tackett, A.J.,Allis, C.D. (deposition date: 2006-11-15, release date: 2007-07-03, Last modification date: 2011-07-13)
Primary citation
Taverna, S.D.,Ilin, S.,Rogers, R.S.,Tanny, J.C.,Lavender, H.,Li, H.,Baker, L.,Boyle, J.,Blair, L.P.,Chait, B.T.,Patel, D.J.,Aitchison, J.D.,Tackett, A.J.,Allis, C.D.
Yng1 PHD finger binding to H3 trimethylated at K4 promotes NuA3 HAT activity at K14 of H3 and transcription at a subset of targeted ORFs
Mol.Cell, 24:785-796, 2006
PubMed: 17157260 (PDB entries with the same primary citation)
DOI: 10.1016/j.molcel.2006.10.026
MImport into Mendeley
Experimental method
SOLUTION NMR
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Structure validation

ClashscoreRamachandran outliersSidechain outliers91 11.2% 27.9%MetricValuePercentile RanksWorseBetterPercentile relative to all structuresPercentile relative to all NMR structures
Download full validation reportDownload
171588
PDB entries from 2020-11-25