Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3CHN
DownloadVisualize
BU of 3chn by Molmil
Solution structure of human secretory IgA1
Descriptor: Ig alpha-1 chain C region, Immunoglobulin kappa light chain, Secretory component
Authors:Bonner, A, Almogren, A, Furtado, P.B, Kerr, M.A, Perkins, S.J.
Deposit date:2008-03-10
Release date:2008-12-30
Last modified:2024-02-21
Method:SOLUTION SCATTERING
Cite:Location of secretory component on the Fc edge of dimeric IgA1 reveals insight into the role of secretory IgA1 in mucosal immunity.
Mucosal Immunol, 2, 2009
3D18
DownloadVisualize
BU of 3d18 by Molmil
Crystal structure of HLA-B*2709 complexed with a variant of the latent membrane protein 2 peptide (LMP2(L)) of epstein-barr virus
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-2-microglobulin, ...
Authors:Beltrami, A, Gabdulkhakov, A, Rossmann, M, Ziegler, A, Uchanska-Ziegler, B, Saenger, W.
Deposit date:2008-05-05
Release date:2009-05-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal structure of HLA-B*2709 complexed with a variant of the latent membrane protein 2 peptide (LMP2(L)) of epstein-barr virus
To be Published
3D2U
DownloadVisualize
BU of 3d2u by Molmil
Structure of UL18, a Peptide-Binding Viral MHC Mimic, Bound to a Host Inhibitory Receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Actin, Beta-2-microglobulin, ...
Authors:Yang, Z, Bjorkman, P.J.
Deposit date:2008-05-08
Release date:2008-07-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structure of UL18, a peptide-binding viral MHC mimic, bound to a host inhibitory receptor
Proc.Natl.Acad.Sci.Usa, 105, 2008
3CH1
DownloadVisualize
BU of 3ch1 by Molmil
Crystal structure of H-2Db in complex with chimeric gp100
Descriptor: Beta-2-microglobulin, GLYCEROL, H-2 class I histocompatibility antigen, ...
Authors:Badia-Martinez, D, Achour, A.
Deposit date:2008-03-06
Release date:2009-03-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Design of agonistic altered peptides for the robust induction of CTL directed towards H-2Db in complex with the melanoma-associated epitope gp100.
Cancer Res., 69, 2009
3CPL
DownloadVisualize
BU of 3cpl by Molmil
Crystal Structure of H-2Db in complex with a variant M6A of the NP366 peptide from influenza A virus
Descriptor: Beta-2-microglobulin, H-2 class I histocompatibility antigen, D-B alpha chain, ...
Authors:Kedzierska, K, Guillonneau, C, Hatton, L.A, Stockwell, D, Gras, S, Webby, R, Rossjohn, J, Purcell, A.W, Doherty, P.C, Turner, S.J.
Deposit date:2008-03-31
Release date:2008-11-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Complete modification of TCR specificity and repertoire selection does not perturb a CD8+ T cell immunodominance hierarchy.
Proc.Natl.Acad.Sci.USA, 105, 2008
3D3V
DownloadVisualize
BU of 3d3v by Molmil
The complex between TCR A6 and human Class I MHC HLA-A2 with the modified HTLV-1 TAX (Y5(3,4-difluoroPhenylalanine)) peptide
Descriptor: A6 TCR alpha chain, A6 TCR beta chain, Beta-2-microglobulin, ...
Authors:Borbulevych, O.Y, Clemens, J.R, Baker, B.M.
Deposit date:2008-05-12
Release date:2009-06-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Fluorine substitutions in an antigenic peptide selectively modulate T-cell receptor binding in a minimally perturbing manner.
Biochem.J., 423, 2009
3F7Y
DownloadVisualize
BU of 3f7y by Molmil
KcsA Potassium channel in the partially open state with 17 A opening at T112
Descriptor: POTASSIUM ION, Voltage-gated potassium channel, antibody fab fragment heavy chain, ...
Authors:Cuello, L.G, Jogini, V, Cortes, D.M, Perozo, E.
Deposit date:2008-11-10
Release date:2010-05-19
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:KcsA Potassium channel in the partially open state with 17 A opening at T112
TO BE PUBLISHED
3DMM
DownloadVisualize
BU of 3dmm by Molmil
Crystal structure of the CD8 alpha beta/H-2Dd complex
Descriptor: Beta-2 microglobulin, H-2 class I histocompatibility antigen, D-D alpha chain, ...
Authors:Wang, R, Natarajan, K, Margulies, D.H.
Deposit date:2008-07-01
Release date:2009-07-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis of the CD8alphabeta/MHC class i interaction: focused recognition orients CD8beta to a T cell proximal position.
J.Immunol., 183, 2009
3DVN
DownloadVisualize
BU of 3dvn by Molmil
Crystal structure of K63-specific fab Apu2.16 bound to K63-linked di-ubiquitin
Descriptor: Human IgG1 fab fragment heavy chain, Human IgG1 fab fragment light chain, Ubiquitin, ...
Authors:Hymowitz, S.G.
Deposit date:2008-07-18
Release date:2008-09-30
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Ubiquitin chain editing revealed by polyubiquitin linkage-specific antibodies.
Cell(Cambridge,Mass.), 134, 2008
3DX7
DownloadVisualize
BU of 3dx7 by Molmil
Crystal Structure of HLA-B*4403 presenting 10mer EBV antigen
Descriptor: ACETATE ION, Beta-2-microglobulin, EBV decapeptide epitope, ...
Authors:Archbold, J.K, Ely, L.K, Rossjohn, J.
Deposit date:2008-07-23
Release date:2009-01-27
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Natural micropolymorphism in human leukocyte antigens provides a basis for genetic control of antigen recognition.
J.Exp.Med., 206, 2009
3CUP
DownloadVisualize
BU of 3cup by Molmil
Crystal structure of the MHC class II molecule I-Ag7 in complex with the peptide GAD221-235
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, H-2 class II histocompatibility antigen, ...
Authors:Corper, A.L, Yoshida, K, Teyton, L, Wilson, I.A.
Deposit date:2008-04-16
Release date:2009-04-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Crystal structure of the MHC class II molecule I-Ag7 in complex with the peptide GAD221-235
To be Published
3CVH
DownloadVisualize
BU of 3cvh by Molmil
How TCR-like antibody recognizes MHC-bound peptide
Descriptor: 25-D1.16 heavy chain, 25-D1.16 light chain, Beta-2-microglobulin, ...
Authors:Mareeva, T, Martinez-Hackert, E, Sykulev, Y.
Deposit date:2008-04-18
Release date:2008-09-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:How a T cell receptor-like antibody recognizes major histocompatibility complex-bound peptide
J.Biol.Chem., 283, 2008
3DTX
DownloadVisualize
BU of 3dtx by Molmil
Crystal structure of HLA-B*2705 complexed with the double citrullinated vasoactive intestinal peptide type 1 receptor (VIPR) peptide (residues 400-408)
Descriptor: Beta-2-microglobulin, Double citrullinated vasoactive intestinal polypeptide receptor, MHC class I antigen (Fragment)
Authors:Beltrami, A, Gabdulkhakov, A, Rossmann, M, Ziegler, A, Uchanska-Ziegler, B, Saenger, W.
Deposit date:2008-07-16
Release date:2009-05-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Citrullination-and mhc polymorphism-dependent conformational changes of a self peptide
To be Published
3DX6
DownloadVisualize
BU of 3dx6 by Molmil
Crystal Structure of B*4402 presenting a 10mer EBV epitope
Descriptor: ACETATE ION, Beta-2-microglobulin, EBV decapeptide epitope, ...
Authors:Archbold, J.K, Ely, L.K, Rossjohn, J.
Deposit date:2008-07-23
Release date:2009-01-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:Natural micropolymorphism in human leukocyte antigens provides a basis for genetic control of antigen recognition.
J.Exp.Med., 206, 2009
3F8U
DownloadVisualize
BU of 3f8u by Molmil
Tapasin/ERp57 heterodimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Protein disulfide-isomerase A3ERp57, Tapasin
Authors:Dong, G, Reinisch, K.M.
Deposit date:2008-11-13
Release date:2009-01-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Insights into MHC class I peptide loading from the structure of the tapasin-ERp57 thiol oxidoreductase heterodimer.
Immunity, 30, 2009
3ES6
DownloadVisualize
BU of 3es6 by Molmil
Crystal structure of the novel complex formed between Zinc 2-glycoprotein (ZAG) and Prolactin inducible protein (PIP) from human seminal plasma
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, HEXAETHYLENE GLYCOL, ...
Authors:Hassan, M.I, Bilgrami, S, Kumar, V, Singh, N, Yadav, S, Kaur, P, Singh, T.P.
Deposit date:2008-10-04
Release date:2008-10-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.23 Å)
Cite:Crystal structure of the novel complex formed between zinc alpha2-glycoprotein (ZAG) and prolactin-inducible protein (PIP) from human seminal plasma
J.Mol.Biol., 384, 2008
3FON
DownloadVisualize
BU of 3fon by Molmil
Crystal structure of the Class I MHC Molecule H-2Kwm7 with a Single Self Peptide VNDIFEAI
Descriptor: Beta-2-microglobulin, MHC, Peptide
Authors:Malashkevich, V.N, Qian, J, Jarchum, I, Yamada, T, Mikesh, L, Palmieri, E, Lund, T, Hattori, M, Shabanowitz, J, Hunt, D.F, Ramagopal, U.A, Brims, D.R, Almo, S.C, Nathenson, S.G, DiLorenzo, T.P.
Deposit date:2008-12-30
Release date:2010-01-12
Last modified:2020-02-05
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Predominant occupation of the class I MHC molecule H-2Kwm7 with a single self-peptide suggests a mechanism for its diabetes-protective effect.
Int.Immunol., 22, 2010
3DVG
DownloadVisualize
BU of 3dvg by Molmil
Crystal structure of K63-specific fab Apu.3A8 bound to K63-linked di-ubiquitin
Descriptor: Human IgG1 fab fragment heavy chain, Human IgG1 fab fragment light chain, Ubiquitin, ...
Authors:Hymowitz, S.G.
Deposit date:2008-07-18
Release date:2008-09-30
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Ubiquitin chain editing revealed by polyubiquitin linkage-specific antibodies.
Cell(Cambridge,Mass.), 134, 2008
3DX8
DownloadVisualize
BU of 3dx8 by Molmil
Crystal Structure of B*4405 presenting a 10mer EBV epitope
Descriptor: Beta-2-microglobulin, EBV decapeptide epitope, GLYCEROL, ...
Authors:Archbold, J.K, Ely, L.K, Rossjohn, J.
Deposit date:2008-07-23
Release date:2009-01-27
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Natural micropolymorphism in human leukocyte antigens provides a basis for genetic control of antigen recognition.
J.Exp.Med., 206, 2009
3F7V
DownloadVisualize
BU of 3f7v by Molmil
KcsA Potassium channel in the open-inactivated state with 23 A opening at T112
Descriptor: POTASSIUM ION, Voltage-gated potassium channel, antibody fab fragment Heavy chain, ...
Authors:Cuello, L.G, Jogini, V, Cortes, D.M, Perozo, E.
Deposit date:2008-11-10
Release date:2010-05-19
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:KcsA Potassium channel in the open-inactivated state with 23 A opening at T112
TO BE PUBLISHED
3FOL
DownloadVisualize
BU of 3fol by Molmil
Crystal structure of the Class I MHC Molecule H-2Kwm7 with a Single Self Peptide VNDIFERI
Descriptor: 8 residue synthetic peptide, Beta-2-microglobulin, MHC
Authors:Brims, D.R, Qian, J, Jarchum, I, Yamada, T, Mikesh, L, Palmieri, E, Lund, T, Hattori, M, Shabanowitz, J, Hunt, D.F, Ramagopal, U.A, Malashkevich, V.N, Almo, S.C, Nathenson, S.G, DiLorenzo, T.P.
Deposit date:2008-12-30
Release date:2010-01-12
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Predominant occupation of the class I MHC molecule H-2Kwm7 with a single self-peptide suggests a mechanism for its diabetes-protective effect
Int.Immunol., 22, 2010
3FOM
DownloadVisualize
BU of 3fom by Molmil
Crystal structure of the Class I MHC Molecule H-2Kwm7 with a Single Self Peptide IQQSIERL
Descriptor: 8 residue synthetic peptide, Beta-2-microglobulin, CHLORIDE ION, ...
Authors:Brims, D.R, Qian, J, Jarchum, I, Yamada, T, Mikesh, L, Palmieri, E, Lund, T, Hattori, M, Shabanowitz, J, Hunt, D.F, Ramagopal, U.A, Malashkevich, V.N, Almo, S.C, Nathenson, S.G, DiLorenzo, T.P.
Deposit date:2008-12-30
Release date:2010-01-12
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Predominant occupation of the class I MHC molecule H-2Kwm7 with a single self-peptide suggests a mechanism for its diabetes-protective effect.
Int.Immunol., 22, 2010
3FQR
DownloadVisualize
BU of 3fqr by Molmil
Phosphorylation of self-peptides alters Human Leukocyte Antigen Class I-restricted antigen presentation and generates tumor specific epitopes
Descriptor: Beta-2-microglobulin, CADMIUM ION, GLYCEROL, ...
Authors:Petersen, J, Rossjohn, J.
Deposit date:2009-01-07
Release date:2009-03-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Phosphorylated self-peptides alter human leukocyte antigen class I-restricted antigen presentation and generate tumor-specific epitopes
Proc.Natl.Acad.Sci.Usa, 106, 2009
3FRU
DownloadVisualize
BU of 3fru by Molmil
NEONATAL FC RECEPTOR, PH 6.5
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, BETA-2-MICROGLOBULIN, BETA-MERCAPTOETHANOL, ...
Authors:Vaughn, D.E, Burmeister, W.P, Bjorkman, P.J.
Deposit date:1997-12-22
Release date:1998-06-10
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis of pH-dependent antibody binding by the neonatal Fc receptor.
Structure, 6, 1998
3FQU
DownloadVisualize
BU of 3fqu by Molmil
Phosphorylation of self-peptides alters Human Leukocyte Antigen Class I-restricted antigen presentation and generates tumor specific epitopes
Descriptor: Beta-2-microglobulin, CADMIUM ION, GLYCEROL, ...
Authors:Petersen, J, Rossjohn, J.
Deposit date:2009-01-07
Release date:2009-03-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Phosphorylated self-peptides alter human leukocyte antigen class I-restricted antigen presentation and generate tumor-specific epitopes
Proc.Natl.Acad.Sci.Usa, 106, 2009

225158

PDB entries from 2024-09-18

PDB statisticsPDBj update infoContact PDBjnumon