Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3OIA
DownloadVisualize
BU of 3oia by Molmil
Crystal Structure of Cytochrome P450cam crystallized in the presence of a tethered substrate analog AdaC1-C8GluEtg-Bio
Descriptor: Camphor 5-monooxygenase, N-{15-oxo-19-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]-4,7,10-trioxa-14-azanonadec-1-yl}-N'-(8-{[(3S,5S,7S)-tricyclo[3.3.1.1~3,7~]dec-1-ylcarbonyl]amino}octyl)pentanediamide, POTASSIUM ION, ...
Authors:Lee, Y.-T, Wilson, R.F, Glazer, E.C, Goodin, D.B.
Deposit date:2010-08-18
Release date:2010-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal Structure of Cytochrome P450cam crystallized in the presence of a tethered substrate analog AdaC1-C8GluEtg-Bio
To be Published
1G0L
DownloadVisualize
BU of 1g0l by Molmil
CRYSTAL STRUCTURE OF T4 LYSOZYME MUTANT T152V
Descriptor: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, PROTEIN (LYSOZYME)
Authors:Xu, J, Baase, W.A, Quillin, M.L, Matthews, B.W.
Deposit date:2000-10-06
Release date:2001-05-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and thermodynamic analysis of the binding of solvent at internal sites in T4 lysozyme.
Protein Sci., 10, 2001
5JWS
DownloadVisualize
BU of 5jws by Molmil
T4 Lysozyme L99A with 1-Hydro-2-ethyl-1,2-azaborine Bound
Descriptor: 2-ethyl-1,2-dihydro-1,2-azaborinine, CHLORIDE ION, Endolysin
Authors:Lee, H, Fischer, M, Shoichet, B.K, Liu, S.-Y.
Deposit date:2016-05-12
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Hydrogen Bonding of 1,2-Azaborines in the Binding Cavity of T4 Lysozyme Mutants: Structures and Thermodynamics.
J.Am.Chem.Soc., 138, 2016
4WJ9
DownloadVisualize
BU of 4wj9 by Molmil
Structure of Human apo ALDH1A1
Descriptor: CHLORIDE ION, Retinal dehydrogenase 1, YTTERBIUM (III) ION
Authors:Morgan, C.A, Hurley, T.D.
Deposit date:2014-09-29
Release date:2014-12-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Development of a high-throughput in vitro assay to identify selective inhibitors for human ALDH1A1.
Chem.Biol.Interact., 234, 2015
3ORF
DownloadVisualize
BU of 3orf by Molmil
Crystal Structure of Dihydropteridine Reductase from Dictyostelium discoideum
Descriptor: Dihydropteridine reductase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Chen, C, Zhuang, N.N, Seo, K.H, Park, Y.S, Lee, K.H.
Deposit date:2010-09-07
Release date:2011-07-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Structural insights into the dual substrate specificities of mammalian and Dictyostelium dihydropteridine reductases toward two stereoisomers of quinonoid dihydrobiopterin
Febs Lett., 585, 2011
1G07
DownloadVisualize
BU of 1g07 by Molmil
CRYSTAL STRUCTURE OF T4 LYSOZYME MUTANT V149C
Descriptor: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, PROTEIN (LYSOZYME)
Authors:Xu, J, Baase, W.A, Quillin, M.L, Matthews, B.W.
Deposit date:2000-10-05
Release date:2001-05-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and thermodynamic analysis of the binding of solvent at internal sites in T4 lysozyme.
Protein Sci., 10, 2001
4WKG
DownloadVisualize
BU of 4wkg by Molmil
The crystal structure of apo ArnA features an unexpected central binding pocket and provides an explanation for enzymatic coop-erativity
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, ACETATE ION, Bifunctional polymyxin resistance protein ArnA
Authors:Grimm, C.
Deposit date:2014-10-02
Release date:2014-12-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The structure of apo ArnA features an unexpected central binding pocket and provides an explanation for enzymatic cooperativity.
Acta Crystallogr.,Sect.D, 71, 2015
3OL5
DownloadVisualize
BU of 3ol5 by Molmil
Crystal Structure of Cytochrome P450cam crystallized with a tethered substrate analog 3OH-AdaC1-C8-Dans
Descriptor: (1R,3S,5R,7S)-N-[8-({[5-(dimethylamino)naphthalen-1-yl]sulfonyl}amino)octyl]-3-hydroxytricyclo[3.3.1.1~3,7~]decane-1-carboxamide, Camphor 5-monooxygenase, POTASSIUM ION, ...
Authors:Lee, Y.-T, Wilson, R.F, Glazer, E.C, Goodin, D.B.
Deposit date:2010-08-25
Release date:2010-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of Cytochrome P450cam crystallized with a tethered substrate analog 3OH-AdaC1-C8-Dans
To be Published
4WMZ
DownloadVisualize
BU of 4wmz by Molmil
S. cerevisiae CYP51 complexed with fluconazole in the active site
Descriptor: 2-(2,4-DIFLUOROPHENYL)-1,3-DI(1H-1,2,4-TRIAZOL-1-YL)PROPAN-2-OL, Lanosterol 14-alpha demethylase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Sagatova, A, Keniya, M.V, Wilson, R, Wilbanks, S.M, Monk, B.C, Tyndall, J.D.A.
Deposit date:2014-10-09
Release date:2015-07-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural Insights into Binding of the Antifungal Drug Fluconazole to Saccharomyces cerevisiae Lanosterol 14 alpha-Demethylase.
Antimicrob.Agents Chemother., 59, 2015
5KF6
DownloadVisualize
BU of 5kf6 by Molmil
Structure of proline utilization A from Sinorhizobium meliloti complexed with L-tetrahydrofuroic acid and NAD+ in space group P21
Descriptor: Bifunctional protein PutA, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, ...
Authors:Tanner, J.J.
Deposit date:2016-06-12
Release date:2016-10-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structures of Proline Utilization A (PutA) Reveal the Fold and Functions of the Aldehyde Dehydrogenase Superfamily Domain of Unknown Function.
J.Biol.Chem., 291, 2016
3OLI
DownloadVisualize
BU of 3oli by Molmil
Structures of human pancreatic alpha-amylase in complex with acarviostatin IV03
Descriptor: (1S,2S,3R,6R)-6-amino-4-(hydroxymethyl)cyclohex-4-ene-1,2,3-triol, (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, ...
Authors:Qin, X, Ren, L.
Deposit date:2010-08-26
Release date:2011-04-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structures of human pancreatic alpha-amylase in complex with acarviostatins: Implications for drug design against type II diabetes.
J.Struct.Biol., 174, 2011
4WOJ
DownloadVisualize
BU of 4woj by Molmil
Aspartate Semialdehyde Dehydrogenase from Francisella tularensis
Descriptor: Aspartate semialdehyde dehydrogenase, SODIUM ION, SULFATE ION
Authors:Mank, N.J, Arnette, A.K, Klapper, V.G, Chruszcz, M.
Deposit date:2014-10-15
Release date:2015-10-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure of aspartate b-semialdehyde dehydrogenase from Francisella tularensis
Acta Crystallogr.,Sect.F, 74, 2018
5JP0
DownloadVisualize
BU of 5jp0 by Molmil
Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose
Descriptor: Beta-glucosidase BoGH3B, MAGNESIUM ION, beta-D-glucopyranose
Authors:Hemsworth, G.R, Thompson, A.J, Stepper, J, Sobala, L.F, Coyle, T, Larsbrink, J, Spadiut, O, Stubbs, K.A, Brumer, H, Davies, G.J.
Deposit date:2016-05-03
Release date:2016-08-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural dissection of a complex Bacteroides ovatus gene locus conferring xyloglucan metabolism in the human gut.
Open Biology, 6, 2016
1UMD
DownloadVisualize
BU of 1umd by Molmil
branched-chain 2-oxo acid dehydrogenase (E1) from Thermus thermophilus HB8 with 4-methyl-2-oxopentanoate as an intermediate
Descriptor: 2-OXO-4-METHYLPENTANOIC ACID, 2-oxo acid dehydrogenase alpha subunit, 2-oxo acid dehydrogenase beta subunit, ...
Authors:Nakai, T, Nakagawa, N, Maoka, N, Masui, R, Kuramitsu, S, Kamiya, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-09-25
Release date:2004-03-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Ligand-induced Conformational Changes and a Reaction Intermediate in Branched-chain 2-Oxo Acid Dehydrogenase (E1) from Thermus thermophilus HB8, as Revealed by X-ray Crystallography
J.Mol.Biol., 337, 2004
7EXK
DownloadVisualize
BU of 7exk by Molmil
An AA9 LPMO of Ceriporiopsis subvermispora
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Nguyen, H, Kondo, K, Nagata, T, Katahira, M, Mikami, B.
Deposit date:2021-05-27
Release date:2022-05-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Functional and Structural Characterizations of Lytic Polysaccharide Monooxygenase, Which Cooperates Synergistically with Cellulases, from Ceriporiopsis subvermispora.
Acs Sustain Chem Eng, 10, 2022
4LRS
DownloadVisualize
BU of 4lrs by Molmil
Crystal and solution structures of the bifunctional enzyme (Aldolase/Aldehyde dehydrogenase) from Thermomonospora curvata, reveal a cofactor-binding domain motion during NAD+ and CoA accommodation whithin the shared cofactor-binding site
Descriptor: 4-hydroxy-2-oxovalerate aldolase, Acetaldehyde dehydrogenase, CHLORIDE ION, ...
Authors:Fischer, B, Branlant, G, Talfournier, F, Gruez, A.
Deposit date:2013-07-20
Release date:2013-09-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal and solution structures of the bifunctional enzyme (Aldolase/Aldehyde dehydrogenase) from Thermomonospora curvata, reveal a cofactor-binding domain motion during NAD+ and CoA accommodation whithin the shared cofactor-binding site
To be Published
5JTA
DownloadVisualize
BU of 5jta by Molmil
Neutral trehalase Nth1 from Saccharomyces cerevisiae
Descriptor: Neutral trehalase
Authors:Alblova, M, Smidova, A, Obsilova, V, Obsil, T.
Deposit date:2016-05-09
Release date:2017-11-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Molecular basis of the 14-3-3 protein-dependent activation of yeast neutral trehalase Nth1.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3OOQ
DownloadVisualize
BU of 3ooq by Molmil
CRYSTAL STRUCTURE OF amidohydrolase from Thermotoga maritima MSB8
Descriptor: GLYCEROL, amidohydrolase
Authors:Malashkevich, V.N, Toro, R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-08-31
Release date:2010-09-15
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:CRYSTAL STRUCTURE OF amidohydrolase from Thermotoga maritima MSB8
To be Published
7EUN
DownloadVisualize
BU of 7eun by Molmil
Crystal structure of N(omega)-hydroxy-L-arginine hydrolase in complex with ABH
Descriptor: 2(S)-AMINO-6-BORONOHEXANOIC ACID, MAGNESIUM ION, MANGANESE (II) ION, ...
Authors:Oda, K, Matoba, Y.
Deposit date:2021-05-18
Release date:2022-05-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Catalytic mechanism of DcsB: Arginase framework used for hydrolyzing its inhibitor.
Protein Sci., 31, 2022
7EUQ
DownloadVisualize
BU of 7euq by Molmil
Crystal structure of C86H-Y124N-G126H-H196S mutant of N(omega)-hydroxy-L-arginine hydrolase
Descriptor: MAGNESIUM ION, MANGANESE (II) ION, N(omega)-hydroxy-L-arginine amidinohydrolase
Authors:Oda, K, Matoba, Y.
Deposit date:2021-05-18
Release date:2022-05-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Catalytic mechanism of DcsB: Arginase framework used for hydrolyzing its inhibitor.
Protein Sci., 31, 2022
4WKT
DownloadVisualize
BU of 4wkt by Molmil
n-Alkylboronic Acid Inhibitors Reveal Determinants of Ligand Specificity in the Quorum-Quenching and Siderophore Biosynthetic Enzyme PvdQ
Descriptor: 1-BUTANE BORONIC ACID, Acyl-homoserine lactone acylase PvdQ, GLYCEROL
Authors:Wu, R, Clevenger, K.D, Fast, W, Liu, D.
Deposit date:2014-10-03
Release date:2014-11-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.782 Å)
Cite:n-Alkylboronic Acid Inhibitors Reveal Determinants of Ligand Specificity in the Quorum-Quenching and Siderophore Biosynthetic Enzyme PvdQ.
Biochemistry, 53, 2014
3ORV
DownloadVisualize
BU of 3orv by Molmil
Crystal Structure of the Y294H-MauG/pre-Methylamine Dehydrogenase Complex
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Jensen, L.M.R, Wilmot, C.M.
Deposit date:2010-09-07
Release date:2010-11-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Functional Importance of Tyrosine 294 and the Catalytic Selectivity for the Bis-Fe(IV) State of MauG Revealed by Replacement of This Axial Heme Ligand with Histidine .
Biochemistry, 49, 2010
4LMR
DownloadVisualize
BU of 4lmr by Molmil
Crystal structure of L-lactate dehydrogenase from Bacillus cereus ATCC 14579, NYSGRC Target 029452
Descriptor: L-lactate dehydrogenase 1
Authors:Malashkevich, V.N, Bonanno, J.B, Bhosle, R, Toro, R, Hillerich, B, Gizzi, A, Garforth, S, Kar, A, Chan, M.K, Lafluer, J, Patel, H, Matikainen, B, Chamala, S, Lim, S, Celikgil, A, Villegas, G, Evans, B, Love, J, Fiser, A, Khafizov, K, Seidel, R, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-07-10
Release date:2013-07-31
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of L-lactate dehydrogenase from Bacillus cereus ATCC 14579, NYSGRC Target 029452
To be Published
4WVY
DownloadVisualize
BU of 4wvy by Molmil
Double-heterohexameric rings of full-length Rvb1(ATP)/Rvb2(apo)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, RuvB-like 1, RuvB-like 2
Authors:Hopfner, K.-P, Lakomek, K.
Deposit date:2014-11-08
Release date:2015-02-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.64 Å)
Cite:Structural Basis for Dodecameric Assembly States and Conformational Plasticity of the Full-Length AAA+ ATPases Rvb1Rvb2.
Structure, 23, 2015
3OVR
DownloadVisualize
BU of 3ovr by Molmil
Crystal Structure of hRPE and D-Xylulose 5-Phosphate Complex
Descriptor: 3,6,9,12,15,18,21,24,27-NONAOXANONACOSANE-1,29-DIOL, 5-O-phosphono-D-xylulose, FE (II) ION, ...
Authors:Liang, W.G, Ouyang, S.Y, Shaw, N, Joachimiak, A, Zhang, R.G, Liu, Z.J.
Deposit date:2010-09-17
Release date:2011-03-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.948 Å)
Cite:Conversion of D-ribulose 5-phosphate to D-xylulose 5-phosphate: new insights from structural and biochemical studies on human RPE
Faseb J., 25, 2011

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon