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7BFC
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BU of 7bfc by Molmil
Circular permutant of ribosomal protein S6, P54-55 truncated,
Descriptor: 30S ribosomal protein S6,30S ribosomal protein S6
Authors:Wang, H, Logan, D.T, Oliveberg, M.
Deposit date:2021-01-02
Release date:2022-07-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Circular permutant of ribosomal protein S6
To Be Published
7BMF
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BU of 7bmf by Molmil
Crystal structure of RecJCdc45 from Methanothermobacter thermoautotroficus in complex with dCTP
Descriptor: CYTIDINE-5'-TRIPHOSPHATE, Conserved protein, DI(HYDROXYETHYL)ETHER, ...
Authors:De March, M, Onesti, S.
Deposit date:2021-01-20
Release date:2022-08-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of RecJCdc45 from Methanothermobacter thermoautotroficus
To Be Published
7BQQ
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BU of 7bqq by Molmil
Solution NMR structure of fold-Z Gogy; de novo designed protein with an asymmetric all-alpha topology
Descriptor: Gogy
Authors:Kobayashi, N, Sugiki, T, Fujiwara, T, Sakuma, K, Kosugi, T, Koga, R, Koga, N.
Deposit date:2020-03-25
Release date:2021-04-07
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Design of complicated all-alpha protein structures
Nat.Struct.Mol.Biol., 2024
7C3I
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BU of 7c3i by Molmil
Structure of L-lysine oxidase D212A/D315A
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Kitagawa, M, Matsumoto, Y, Inagaki, K, Imada, K.
Deposit date:2020-05-12
Release date:2020-09-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of strict substrate recognition of l-lysine alpha-oxidase from Trichoderma viride.
Protein Sci., 29, 2020
7C7X
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BU of 7c7x by Molmil
Structural insights into nucleosome reorganization by NAP1-RELATED PROTEIN 1 (NRP1)
Descriptor: GLYCEROL, Histone H2A.6, Histone H2B.1, ...
Authors:Luo, Q, Baihui, W.
Deposit date:2020-05-27
Release date:2020-11-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:NAP1-Related Protein 1 (NRP1) has multiple interaction modes for chaperoning histones H2A-H2B.
Proc.Natl.Acad.Sci.USA, 117, 2020
7C87
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BU of 7c87 by Molmil
Peroxiredoxin from Aeropyrum pernix K1 (ApPrx) C50S/F80C/C207S/C213S mutant (ApPrx*F80C)
Descriptor: CITRIC ACID, Peroxiredoxin
Authors:Himiyama, T, Nakamura, T.
Deposit date:2020-05-29
Release date:2020-12-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Rebuilding Ring-Type Assembly of Peroxiredoxin by Chemical Modification.
Bioconjug.Chem., 32, 2021
7CCU
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BU of 7ccu by Molmil
Crystal structure of death-associated protein kinase 1 in complex with resveratrol
Descriptor: Death-associated protein kinase 1, RESVERATROL, SULFATE ION
Authors:Yokoyama, T, Suzuki, R, Mizuguchi, M.
Deposit date:2020-06-18
Release date:2021-01-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.649 Å)
Cite:Crystal structure of death-associated protein kinase 1 in complex with the dietary compound resveratrol.
Iucrj, 8, 2020
7CBT
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BU of 7cbt by Molmil
The crystal structure of SARS-CoV-2 main protease in complex with GC376
Descriptor: (1S,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 3C-like proteinase
Authors:Shi, Y, Peng, G.
Deposit date:2020-06-13
Release date:2020-09-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.346 Å)
Cite:The preclinical inhibitor GS441524 in combination with GC376 efficaciously inhibited the proliferation of SARS-CoV-2 in the mouse respiratory tract.
Emerg Microbes Infect, 10, 2021
7CR2
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BU of 7cr2 by Molmil
human KCNQ2 in complex with retigabine
Descriptor: Potassium voltage-gated channel subfamily KQT member 2, ethyl N-[2-azanyl-4-[(4-fluorophenyl)methylamino]phenyl]carbamate
Authors:Li, X, Lv, D, Wang, J, Ye, S, Guo, J.
Deposit date:2020-08-12
Release date:2020-09-16
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Molecular basis for ligand activation of the human KCNQ2 channel.
Cell Res., 31, 2021
7C39
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BU of 7c39 by Molmil
Crystal structure of AofleA from Arthrobotrys oligospora in complex with methylated L-fucose
Descriptor: AoflcA, CITRIC ACID, GLYCEROL, ...
Authors:Liu, M, Cheng, X, Wang, J, Zhang, M, Wang, M.
Deposit date:2020-05-11
Release date:2020-07-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural insights into the fungi-nematodes interaction mediated by fucose-specific lectin AofleA from Arthrobotrys oligospora.
Int.J.Biol.Macromol., 164, 2020
7C89
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BU of 7c89 by Molmil
Peroxiredoxin from Aeropyrum pernix K1 (ApPrx) C50S/F80C/C207S/C213S mutant modified with 2-bromoacetophenone(Ph@ApPrx*)
Descriptor: 2-bromanyl-1-phenyl-ethanone, CITRATE ANION, Peroxiredoxin
Authors:Himiyama, T, Nakamura, T.
Deposit date:2020-05-29
Release date:2020-12-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Rebuilding Ring-Type Assembly of Peroxiredoxin by Chemical Modification.
Bioconjug.Chem., 32, 2021
7C3D
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BU of 7c3d by Molmil
Crystal structure of AofleA from Arthrobotrys oligospora in complex with D-arabinose
Descriptor: AofleA, GLYCEROL, alpha-D-arabinopyranose, ...
Authors:Liu, M, Cheng, X, Wang, J, Zhang, M, Wang, M.
Deposit date:2020-05-12
Release date:2020-07-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.596 Å)
Cite:Structural insights into the fungi-nematodes interaction mediated by fucose-specific lectin AofleA from Arthrobotrys oligospora.
Int.J.Biol.Macromol., 164, 2020
7CFS
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BU of 7cfs by Molmil
Cryo-EM strucutre of human acid-sensing ion channel 1a at pH 8.0
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Acid-sensing ion channel 1, CHOLESTEROL HEMISUCCINATE, ...
Authors:Sun, D.M, Liu, S.L, Li, S.Y, Yang, F, Tian, C.L.
Deposit date:2020-06-28
Release date:2020-10-21
Method:ELECTRON MICROSCOPY (3.56 Å)
Cite:Structural insights into human acid-sensing ion channel 1a inhibition by snake toxin mambalgin1.
Elife, 9, 2020
7C7E
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BU of 7c7e by Molmil
Crystal structure of C terminal domain of Escherichia coli DgoR
Descriptor: Putative DNA-binding transcriptional regulator, SULFATE ION, TRIETHYLENE GLYCOL, ...
Authors:Lin, W.
Deposit date:2020-05-25
Release date:2021-01-20
Method:X-RAY DIFFRACTION (2.047 Å)
Cite:Structural and Functional Analyses of the Transcription Repressor DgoR From Escherichia coli Reveal a Divalent Metal-Containing D-Galactonate Binding Pocket.
Front Microbiol, 11, 2020
7CJF
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BU of 7cjf by Molmil
Crystal structure of SARS-CoV-2 RBD in complex with a neutralizing antibody Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, antibody heavy chain, ...
Authors:Guo, Y, Li, X, Zhang, G, Fu, D, Schweizer, L, Zhang, H, Rao, Z.
Deposit date:2020-07-10
Release date:2020-11-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.108 Å)
Cite:A SARS-CoV-2 neutralizing antibody with extensive Spike binding coverage and modified for optimal therapeutic outcomes.
Nat Commun, 12, 2021
7CLG
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BU of 7clg by Molmil
Crystal structure of the ATP-dependent restriction endonuclease SauUSI
Descriptor: Putative helicase, SULFATE ION
Authors:Saikrishnan, K, Tumuluri, V.S.
Deposit date:2020-07-21
Release date:2021-01-20
Last modified:2021-08-04
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Mechanism of DNA cleavage by the endonuclease SauUSI: a major barrier to horizontal gene transfer and antibiotic resistance in Staphylococcus aureus.
Nucleic Acids Res., 49, 2021
7CGR
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BU of 7cgr by Molmil
Crystal structure of Azospirillum brasilense L-arabinose 1-dehydrogenase E147A mutant (NADP and glycerol bound form)
Descriptor: GLYCEROL, L-arabinose 1-dehydrogenase (NAD(P)(+)), NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Yoshiwara, K, Watanabe, Y, Watanabe, S.
Deposit date:2020-07-02
Release date:2020-07-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.093 Å)
Cite:Crystal structure of bacterial L-arabinose 1-dehydrogenase in complex with L-arabinose and NADP+
Biochem.Biophys.Res.Commun., 530, 2020
7CRQ
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BU of 7crq by Molmil
NSD3 bearing E1181K/T1232A dual mutation in complex with 187-bp NCP (2:1 binding mode)
Descriptor: DNA (168-MER), Histone H2A, Histone H2B, ...
Authors:Li, W, Tian, W, Yuan, G, Deng, P, Gozani, O, Patel, D, Wang, Z.
Deposit date:2020-08-14
Release date:2020-10-21
Last modified:2021-03-03
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Molecular basis of nucleosomal H3K36 methylation by NSD methyltransferases.
Nature, 590, 2021
7C3L
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BU of 7c3l by Molmil
Structure of L-lysine oxidase D212A/D315A in complex with L-tyrosine
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, L-lysine oxidase, ...
Authors:Kitagawa, M, Matsumoto, Y, Inagaki, K, Imada, K.
Deposit date:2020-05-12
Release date:2020-09-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis of strict substrate recognition of l-lysine alpha-oxidase from Trichoderma viride.
Protein Sci., 29, 2020
7CRC
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BU of 7crc by Molmil
Cryo-EM structure of plant NLR RPP1 tetramer in complex with ATR1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Avirulence protein ATR1, ...
Authors:Ma, S.C, Lapin, D, Liu, L, Sun, Y, Song, W, Zhang, X.X, Logemann, E, Yu, D.L, Wang, J, Jirschitzka, J, Han, Z.F, SchulzeLefert, P, Parker, J.E, Chai, J.J.
Deposit date:2020-08-13
Release date:2020-12-16
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.02 Å)
Cite:Direct pathogen-induced assembly of an NLR immune receptor complex to form a holoenzyme.
Science, 370, 2020
7CE1
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BU of 7ce1 by Molmil
Complex STRUCTURE OF TRANSCRIPTION FACTOR SghR with its COGNATE DNA
Descriptor: LacI-type transcription factor, promoter DNA
Authors:Ye, F.Z, Wang, C, Yan, X.F, Zhang, L.H, Gao, Y.G.
Deposit date:2020-06-21
Release date:2020-07-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis of a novel repressor, SghR, controllingAgrobacteriuminfection by cross-talking to plants.
J.Biol.Chem., 295, 2020
7CM5
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BU of 7cm5 by Molmil
Full-length Sarm1 in a self-inhibited state
Descriptor: NAD(+) hydrolase SARM1
Authors:Zhang, Z, Jiang, Y.
Deposit date:2020-07-24
Release date:2020-10-21
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:The NAD + -mediated self-inhibition mechanism of pro-neurodegenerative SARM1.
Nature, 588, 2020
7CQY
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BU of 7cqy by Molmil
Tetrathionate hydrolase from Acidithiobacillus ferrooxidans mutant - D325N
Descriptor: SULFATE ION, Tetrathionate hydrolase
Authors:Tamada, T, Hirano, Y.
Deposit date:2020-08-12
Release date:2021-01-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.80035782 Å)
Cite:Reaction mechanism of tetrathionate hydrolysis based on the crystal structure of tetrathionate hydrolase from Acidithiobacillus ferrooxidans.
Protein Sci., 30, 2020
7CCV
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BU of 7ccv by Molmil
Crystal structure of death-associated protein kinase 1 in complex with piceatannol
Descriptor: Death-associated protein kinase 1, PICEATANNOL, SULFATE ION
Authors:Yokoyama, T, Suzuki, R, Mizuguchi, M.
Deposit date:2020-06-18
Release date:2021-01-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.753 Å)
Cite:Crystal structure of death-associated protein kinase 1 in complex with the dietary compound resveratrol.
Iucrj, 8, 2020
7CSZ
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BU of 7csz by Molmil
Crystal structure of the N-terminal tandem RRM domains of RBM45 in complex with single-stranded DNA
Descriptor: DNA (5'-D(*CP*GP*AP*CP*GP*GP*GP*AP*CP*GP*C)-3'), RNA-binding protein 45
Authors:Chen, X, Yang, Z, Wang, W, Wang, M.
Deposit date:2020-08-17
Release date:2021-02-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for RNA recognition by the N-terminal tandem RRM domains of human RBM45.
Nucleic Acids Res., 49, 2021

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PDB entries from 2024-08-14

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