PDB: 325 resultsInfo pagesStatus searchChemie searchBIRD

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6H5H	A computationally designed dRP lyase domain reconstructed from two heterologous fragments Descriptor: polb4 Authors: ElGamacy, M, Coles, M, Lupas, A.N. Deposit date: 2018-07-24 Release date: 2018-12-12 Last modified: 2024-06-19 Method: SOLUTION NMR Cite: Asymmetric protein design from conserved supersecondary structures. J. Struct. Biol., 204, 2018
6HIL	X-ray structure of TEAD1(Y421H mutant) complexed with YAP(wildtype): Molecular and structural characterization of a TEAD mutation at the origin of Sveinsson's chorioretinal atrophy Descriptor: MYRISTIC ACID, Transcriptional coactivator YAP1, Transcriptional enhancer factor TEF-1 Authors: Kallen, J. Deposit date: 2018-08-30 Release date: 2019-04-03 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Molecular and structural characterization of a TEAD mutation at the origin of Sveinsson's chorioretinal atrophy. Febs J., 286, 2019
5X8W	Crystal Structure of the mutant Human ROR gamma Ligand Binding Domain. Descriptor: Nuclear receptor ROR-gamma, Nuclear receptor coactivator 1 Authors: Noguchi, M, Nomura, A, Murase, K, Doi, S, Yamaguchi, K, Adachi, T. Deposit date: 2017-03-03 Release date: 2017-06-07 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Ternary complex of human ROR gamma ligand-binding domain, inverse agonist and SMRT peptide shows a unique mechanism of corepressor recruitment Genes Cells, 22, 2017
5YQW	Structure and function of a novel periplasmic chitooligosaccharide-binding protein from marine Vibrio bacteria Descriptor: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, NICKEL (II) ION, ... Authors: Suginta, W, Sritho, N, Ranok, A, Kitaoku, Y, Bulmer, D.M, van den Berg, B, Fukamizo, T. Deposit date: 2017-11-08 Release date: 2018-02-21 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (1.36 Å) Cite: Structure and function of a novel periplasmic chitooligosaccharide-binding protein from marineVibriobacteria. J. Biol. Chem., 293, 2018
4DOR	Human Nuclear Receptor Liver Receptor Homologue-1, LRH-1, in its apo State Bound to a Fragment of Human SHP Box1 Descriptor: L-ALPHA-PHOSPHATIDYL-BETA-OLEOYL-GAMMA-PALMITOYL-PHOSPHATIDYLETHANOLAMINE, Nuclear receptor subfamily 0 group B member 2, Nuclear receptor subfamily 5 group A member 2 Authors: Musille, P.M, Ortlund, E.A. Deposit date: 2012-02-10 Release date: 2012-04-18 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Antidiabetic phospholipid-nuclear receptor complex reveals the mechanism for phospholipid-driven gene regulation. Nat.Struct.Mol.Biol., 19, 2012
4AWA	Crystal structure of active legumain in complex with YVAD-CMK at pH 5.0 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, LEGUMAIN, SULFATE ION, ... Authors: Dall, E, Brandstetter, H. Deposit date: 2012-06-01 Release date: 2013-06-26 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Mechanistic and Structural Studies on Legumain Explain its Zymogenicity, Distinct Activation Pathways, and Regulation Proc.Natl.Acad.Sci.USA, 110, 2013
4AWB	Crystal structure of active legumain in complex with AAN-CMK Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, LEGUMAIN, MERCURY (II) ION, ... Authors: Dall, E, Brandstetter, H. Deposit date: 2012-06-01 Release date: 2013-06-26 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Mechanistic and Structural Studies on Legumain Explain its Zymogenicity, Distinct Activation Pathways, and Regulation Proc.Natl.Acad.Sci.USA, 110, 2013
3T9Q	Structure of the Phosphatase Domain of the Cell Fate Determinant SpoIIE from Bacillus subtilis (Mn presoaked) Descriptor: MANGANESE (II) ION, Stage II sporulation protein E, beta-D-gulopyranose Authors: Levdikov, V.M, Blagova, E.V, Wilkinson, A.J. Deposit date: 2011-08-03 Release date: 2011-12-07 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.76 Å) Cite: Structure of the phosphatase domain of the cell fate determinant SpoIIE from Bacillus subtilis. J.Mol.Biol., 415, 2012
4BUR	Crystal structure of the reduced human Apoptosis inducing factor complexed with NAD Descriptor: APOPTOSIS INDUCING FACTOR 1, MITOCHONDRIAL, FLAVIN-ADENINE DINUCLEOTIDE, ... Authors: Martinez-Julvez, M, Herguedas, B, Hermoso, J.A, Ferreira, P, Villanueva, R, Medina, M. Deposit date: 2013-06-23 Release date: 2014-07-09 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.88 Å) Cite: Structural Insights Into the Coenzyme Mediated Monomer-Dimer Transition of the Pro-Apoptotic Apoptosis Inducing Factor. Biochemistry, 53, 2014
4DOS	Human Nuclear Receptor Liver Receptor Homologue-1, LRH-1, Bound to DLPC and a Fragment of TIF-2 Descriptor: DIUNDECYL PHOSPHATIDYL CHOLINE, Nuclear receptor coactivator 2, Nuclear receptor subfamily 5 group A member 2, ... Authors: Musille, P.M, Ortlund, E.A. Deposit date: 2012-02-10 Release date: 2012-04-18 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2 Å) Cite: Antidiabetic phospholipid-nuclear receptor complex reveals the mechanism for phospholipid-driven gene regulation. Nat.Struct.Mol.Biol., 19, 2012
4BYY	Apo GlxR Descriptor: GLYCEROL, PHOSPHATE ION, TRANSCRIPTIONAL REGULATOR, ... Authors: Pohl, E, Cann, M.J, Townsend, P.D, Money, V.A. Deposit date: 2013-07-21 Release date: 2014-07-30 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2.48 Å) Cite: The Crystal Structures of Apo and Camp-Bound Glxr from Corynebacterium Glutamicum Reveal Structural and Dynamic Changes Upon Camp Binding in Crp/Fnr Family Transcription Factors. Plos One, 9, 2014
4BH6	Insights into degron recognition by APC coactivators from the structure of an Acm1-Cdh1 complex Descriptor: APC/C ACTIVATOR PROTEIN CDH1, APC/C-CDH1 MODULATOR 1 Authors: He, J, Chao, W.C.H, Zhang, Z, Yang, J, Cronin, N, Barford, D. Deposit date: 2013-03-29 Release date: 2013-06-05 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Insights Into Degron Recognition by Apc/C Coactivators from the Structure of an Acm1-Cdh1 Complex. Mol.Cell, 50, 2013
4AW9	Crystal structure of active legumain in complex with YVAD-CMK Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACE-TYR-VAL-ALA-ASP-CHLOROMETHYLKETONE, LEGUMAIN, ... Authors: Dall, E, Brandstetter, H. Deposit date: 2012-06-01 Release date: 2013-06-26 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Mechanistic and Structural Studies on Legumain Explain its Zymogenicity, Distinct Activation Pathways, and Regulation Proc.Natl.Acad.Sci.USA, 110, 2013
3VJH	Human PPAR GAMMA ligand binding domain in complex with JKPL35 Descriptor: (2S)-2-[4-methoxy-3-({[4-(trifluoromethyl)benzoyl]amino}methyl)benzyl]pentanoic acid, Peroxisome proliferator-activated receptor gamma Authors: Tomioka, D, Kuwabara, N, Hashimoto, H, Sato, M, Shimizu, T. Deposit date: 2011-10-20 Release date: 2012-08-29 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.22 Å) Cite: Peroxisome proliferator-activated receptors (PPARs) have multiple binding points that accommodate ligands in various conformations: phenylpropanoic acid-type PPAR ligands bind to PPAR in different conformations, depending on the subtype. J.Med.Chem., 55, 2012
3VU3	Crystal structure of the Hfq and catalase HPII complex Descriptor: Catalase HPII, PROTOPORPHYRIN IX CONTAINING FE, Protein hfq Authors: Watanabe, M, Yonekura, K. Deposit date: 2012-06-15 Release date: 2013-11-20 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.85 Å) Cite: Post-Transcriptional Regulator Hfq Binds Catalase HPII: Crystal Structure of the Complex Plos One, 8, 2013
3VJI	Human PPAR gamma ligand binding domain in complex with JKPL53 Descriptor: (2S)-2-{4-butoxy-3-[({4-[(3S,5S,7S)-tricyclo[3.3.1.1~3,7~]dec-1-yl]benzoyl}amino)methyl]benzyl}butanoic acid, Peroxisome proliferator-activated receptor gamma Authors: Tomioka, D, Kuwabara, N, Hashimoto, H, Sato, M, Shimizu, T. Deposit date: 2011-10-20 Release date: 2012-08-29 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.61 Å) Cite: Peroxisome proliferator-activated receptors (PPARs) have multiple binding points that accommodate ligands in various conformations: phenylpropanoic acid-type PPAR ligands bind to PPAR in different conformations, depending on the subtype. J.Med.Chem., 55, 2012
3WWV	C-terminal domain of stomatin operon partner protein 1510-C from Pyrococcus horikoshii Descriptor: SODIUM ION, Stomatin operon partner protein Authors: Yokoyama, H, Matsui, I. Deposit date: 2014-06-30 Release date: 2014-10-01 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Crystal structure of the stomatin operon partner protein from Pyrococcus horikoshii indicates the formation of a multimeric assembly FEBS Open Bio, 4, 2014
4MFL	The crystal structure of acyltransferase in complex with decanoyl-CoA and Tei pseudoaglycone Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-amino-2-deoxy-beta-D-glucopyranose, Putative uncharacterized protein tcp24, ... Authors: Lyu, S.Y, Liu, Y.C, Chang, C.Y, Huang, C.J, Li, T.L. Deposit date: 2013-08-28 Release date: 2014-09-03 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Multiple complexes of long aliphatic N-acyltransferases lead to synthesis of 2,6-diacylated/2-acyl-substituted glycopeptide antibiotics, effectively killing vancomycin-resistant enterococcus J.Am.Chem.Soc., 136, 2014
4MFK	The crystal structure of acyltransferase in complex with decanoyl-CoA Descriptor: Putative uncharacterized protein tcp24, SULFATE ION, decanoyl-CoA Authors: Lyu, S.Y, Liu, Y.C, Chang, C.Y, Huang, C.J, Li, T.L. Deposit date: 2013-08-28 Release date: 2014-09-03 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Multiple complexes of long aliphatic N-acyltransferases lead to synthesis of 2,6-diacylated/2-acyl-substituted glycopeptide antibiotics, effectively killing vancomycin-resistant enterococcus J.Am.Chem.Soc., 136, 2014
4MFZ	The crystal structure of acyltransferase in complex with decanoyl-CoA Descriptor: Dbv8 protein, SODIUM ION, SULFATE ION, ... Authors: Lyu, S.Y, Liu, Y.C, Chang, C.Y, Huang, C.J, Li, T.L. Deposit date: 2013-08-28 Release date: 2014-09-03 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Multiple complexes of long aliphatic N-acyltransferases lead to synthesis of 2,6-diacylated/2-acyl-substituted glycopeptide antibiotics, effectively killing vancomycin-resistant enterococcus J.Am.Chem.Soc., 136, 2014
4MFP	The crystal structure of acyltransferase in complex with decanoyl-CoA and Tei pseudoaglycone Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-amino-2-deoxy-beta-D-glucopyranose, COENZYME A, ... Authors: Lyu, S.Y, Liu, Y.C, Chang, C.Y, Huang, C.J, Li, T.L. Deposit date: 2013-08-28 Release date: 2014-09-03 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Multiple complexes of long aliphatic N-acyltransferases lead to synthesis of 2,6-diacylated/2-acyl-substituted glycopeptide antibiotics, effectively killing vancomycin-resistant enterococcus J.Am.Chem.Soc., 136, 2014
4K2R	Structural basis for activation of ZAP-70 by phosphorylation of the SH2-kinase linker Descriptor: MAGNESIUM ION, PHOSPHATE ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... Authors: Yan, Q, Barros, T, Visperas, P.R, Deindl, S, Kadlecek, T.A, Weiss, A, Kuriyan, J. Deposit date: 2013-04-09 Release date: 2013-05-08 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (3 Å) Cite: Structural Basis for Activation of ZAP-70 by Phosphorylation of the SH2-Kinase Linker. Mol.Cell.Biol., 33, 2013
4EKW	Crystal structure of the NavAb voltage-gated sodium channel (wild-type, 3.2 A) Descriptor: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Ion transport protein, PHOSPHATE ION Authors: Payandeh, J, Gamal El-Din, T.M, Scheuer, T, Zheng, N, Catterall, W.A. Deposit date: 2012-04-10 Release date: 2012-05-16 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (3.21 Å) Cite: Crystal structure of a voltage-gated sodium channel in two potentially inactivated states. Nature, 486, 2012
4MFQ	The crystal structure of acyltransferase in complex with CoA and 10C-Teicoplanin Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-amino-2-deoxy-beta-D-glucopyranose, COENZYME A, ... Authors: Lyu, S.Y, Liu, Y.C, Chang, C.Y, Huang, C.J, Li, T.L. Deposit date: 2013-08-28 Release date: 2014-09-03 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (2 Å) Cite: Multiple complexes of long aliphatic N-acyltransferases lead to synthesis of 2,6-diacylated/2-acyl-substituted glycopeptide antibiotics, effectively killing vancomycin-resistant enterococcus J.Am.Chem.Soc., 136, 2014
4MFJ	The crystal structure of acyltransferase Descriptor: Putative uncharacterized protein tcp24 Authors: Lyu, S.Y, Liu, Y.C, Chang, C.Y, Huang, C.J, Li, T.L. Deposit date: 2013-08-28 Release date: 2014-09-03 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Multiple complexes of long aliphatic N-acyltransferases lead to synthesis of 2,6-diacylated/2-acyl-substituted glycopeptide antibiotics, effectively killing vancomycin-resistant enterococcus J.Am.Chem.Soc., 136, 2014

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