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3JA5
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BU of 3ja5 by Molmil
Genome and RdRp structure within the capsid of no-transcribing cypovirus
Descriptor: RNA-dependent RNA polymerase
Authors:Liu, H, Cheng, L.
Deposit date:2015-04-21
Release date:2015-10-28
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (12 Å)
Cite:Cryo-EM shows the polymerase structures and a nonspooled genome within a dsRNA virus.
Science, 349, 2015
4CHC
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BU of 4chc by Molmil
Crystal structure of the N-terminal domain of the PA subunit of Thogoto virus polymerase (form 2)
Descriptor: POLYMERASE ACIDIC PROTEIN
Authors:Guilligay, D, Kadlec, J, Crepin, T, Lunardi, T, Bouvier, D, Kochs, G, Ruigrok, R.W.H, Cusack, S.
Deposit date:2013-12-01
Release date:2014-02-05
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Comparative Structural and Functional Analysis of Orthomyxovirus Polymerase CAP-Snatching Domains.
Plos One, 9, 2014
4CHE
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BU of 4che by Molmil
Crystal structure of the putative cap-binding domain of the PB2 subunit of Thogoto virus polymerase
Descriptor: POLYMERASE BASIC PROTEIN 2
Authors:Guilligay, D, Kadlec, J, Crepin, T, Lunardi, T, Bouvier, D, Kochs, G, Ruigrok, R.W.H, Cusack, S.
Deposit date:2013-12-01
Release date:2014-02-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Comparative Structural and Functional Analysis of Orthomyxovirus Polymerase CAP-Snatching Domains.
Plos One, 9, 2014
4CHF
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BU of 4chf by Molmil
Crystal structure of the putative cap-binding domain of the PB2 subunit of Thogoto virus polymerase (form 2)
Descriptor: POLYMERASE BASIC PROTEIN 2
Authors:Guilligay, D, Kadlec, J, Crepin, T, Lunardi, T, Bouvier, D, Kochs, G, Ruigrok, R.W.H, Cusack, S.
Deposit date:2013-12-01
Release date:2014-02-05
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Comparative Structural and Functional Analysis of Orthomyxovirus Polymerase CAP-Snatching Domains.
Plos One, 9, 2014
7COC
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BU of 7coc by Molmil
Ternary complex of DNA polymerase Mu (K438A/Q441A) with 1-nt gapped DNA (T:dGMPNPP)
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA (5'-D(*CP*GP*GP*CP*TP*TP*AP*CP*G)-3'), DNA (5'-D(*CP*GP*TP*A)-3'), ...
Authors:Guo, M, Zhao, Y.
Deposit date:2020-08-04
Release date:2021-06-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mechanism of genome instability mediated by human DNA polymerase mu misincorporation.
Nat Commun, 12, 2021
7COB
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BU of 7cob by Molmil
Ternary complex of DNA polymerase Mu (Q441A) with 1-nt gapped DNA (T:dGMPNPP)
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA (5'-D(*CP*GP*GP*CP*TP*TP*AP*CP*G)-3'), DNA (5'-D(*CP*GP*TP*A)-3'), ...
Authors:Guo, M, Zhao, Y.
Deposit date:2020-08-04
Release date:2021-06-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.797 Å)
Cite:Mechanism of genome instability mediated by human DNA polymerase mu misincorporation.
Nat Commun, 12, 2021
7CO9
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BU of 7co9 by Molmil
Ternary complex of DNA polymerase Mu with 1-nt gapped DNA (T:dGMPNPP) and Mg
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA (5'-D(*CP*GP*GP*CP*TP*TP*AP*CP*G)-3'), DNA (5'-D(*CP*GP*TP*A)-3'), ...
Authors:Guo, M, Zhao, Y.
Deposit date:2020-08-04
Release date:2021-06-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.599 Å)
Cite:Mechanism of genome instability mediated by human DNA polymerase mu misincorporation.
Nat Commun, 12, 2021
7CO8
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BU of 7co8 by Molmil
Ternary complex of DNA polymerase Mu with 2-nt gapped DNA (T:dGMPNPP)
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA (5'-D(*CP*GP*GP*CP*TP*TP*TP*AP*CP*G)-3'), DNA (5'-D(*CP*GP*TP*A)-3'), ...
Authors:Guo, M, Zhao, Y.
Deposit date:2020-08-04
Release date:2021-06-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.697 Å)
Cite:Mechanism of genome instability mediated by human DNA polymerase mu misincorporation.
Nat Commun, 12, 2021
7COA
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BU of 7coa by Molmil
Ternary complex of DNA polymerase Mu with 1-nt gapped DNA (T:dGMPNPP) and Mn
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA (5'-D(*CP*GP*GP*CP*TP*TP*AP*CP*G)-3'), DNA (5'-D(*CP*GP*TP*A)-3'), ...
Authors:Guo, M, Zhao, Y.
Deposit date:2020-08-04
Release date:2021-06-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.698 Å)
Cite:Mechanism of genome instability mediated by human DNA polymerase mu misincorporation.
Nat Commun, 12, 2021
4CGX
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BU of 4cgx by Molmil
Crystal structure of the N-terminal domain of the PA subunit of Thogoto virus polymerase (form 1)
Descriptor: POLYMERASE ACIDIC PROTEIN
Authors:Guilligay, D, Kadlec, J, Crepin, T, Lunardi, T, Bouvier, D, Kochs, G, Ruigrok, R.W.H, Cusack, S.
Deposit date:2013-11-27
Release date:2014-02-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Comparative Structural and Functional Analysis of Orthomyxovirus Polymerase CAP-Snatching Domains.
Plos One, 9, 2014
4CHD
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BU of 4chd by Molmil
Crystal structure of the '627' domain of the PB2 subunit of Thogoto virus polymerase
Descriptor: POLYMERASE ACIDIC PROTEIN
Authors:Guilligay, D, Kadlec, J, Crepin, T, Lunardi, T, Bouvier, D, Kochs, G, Ruigrok, R.W.H, Cusack, S.
Deposit date:2013-12-01
Release date:2014-02-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Comparative Structural and Functional Analysis of Orthomyxovirus Polymerase CAP-Snatching Domains.
Plos One, 9, 2014
3JSB
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BU of 3jsb by Molmil
Crystal structure of the N-terminal domain of the Lymphocytic Choriomeningitis Virus L protein
Descriptor: RNA-directed RNA polymerase
Authors:Morin, B, Jamal, S, Ferron, F.P, Coutard, B, Bricogne, G, Canard, B, Vonrhein, C, Marseilles Structural Genomics Program @ AFMB (MSGP)
Deposit date:2009-09-10
Release date:2010-09-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:The N-terminal domain of the arenavirus L protein is an RNA endonuclease essential in mRNA transcription
Plos Pathog., 6, 2010
2X1A
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BU of 2x1a by Molmil
Structure of Rna15 RRM with RNA bound (G)
Descriptor: 5'-R(*GP*UP*UP*GP*UP)-3', MAGNESIUM ION, MRNA 3'-END-PROCESSING PROTEIN RNA15
Authors:Pancevac, C, Goldstone, D.C, Ramos, A, Taylor, I.A.
Deposit date:2010-01-06
Release date:2010-02-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of the RNA15 Rrm-RNA Complex Reveals the Molecular Basis of Gu Specificity in Transcriptional 3-End Processing Factors.
Nucleic Acids Res., 38, 2010
2X1F
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BU of 2x1f by Molmil
Structure of Rna15 RRM with bound RNA (GU)
Descriptor: 5'-R(*GP*UP*UP*GP*UP)-3', MRNA 3'-END-PROCESSING PROTEIN RNA15
Authors:Pancevac, C, Goldstone, D.C, Ramos, A, Taylor, I.A.
Deposit date:2010-01-06
Release date:2010-02-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of the RNA15 Rrm-RNA Complex Reveals the Molecular Basis of Gu Specificity in Transcriptional 3-End Processing Factors.
Nucleic Acids Res., 38, 2010
5XOX
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BU of 5xox by Molmil
Crystal structure of tRNA(His) guanylyltranserase from Saccharomyces cerevisiae
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Lee, K, Lee, E.H, Son, J, Hwang, K.Y.
Deposit date:2017-05-31
Release date:2017-07-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of tRNA(His) guanylyltransferase from Saccharomyces cerevisiae
Biochem. Biophys. Res. Commun., 490, 2017
2VY7
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BU of 2vy7 by Molmil
The 627-domain from influenza A virus polymerase PB2 subunit
Descriptor: POLYMERASE BASIC PROTEIN 2
Authors:Tarendeau, F, Crepin, T, Guilligay, D, Ruigrok, R, Cusack, S, Hart, D.
Deposit date:2008-07-18
Release date:2008-09-09
Last modified:2012-06-06
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Host Determinant Residue Lysine 627 Lies on the Surface of a Discrete, Folded Domain of Influenza Virus Polymerase Pb2 Subunit
Plos Pathog., 4, 2008
2VY8
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BU of 2vy8 by Molmil
The 627-domain from influenza A virus polymerase PB2 subunit with Glu- 627
Descriptor: POLYMERASE BASIC PROTEIN 2
Authors:Tarendeau, F, Crepin, T, Guilligay, D, Ruigrok, R, Cusack, S, Hart, D.
Deposit date:2008-07-19
Release date:2008-09-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Host Determinant Residue Lysine 627 Lies on the Surface of a Discrete, Folded Domain of Influenza Virus Polymerase Pb2 Subunit
Plos Pathog., 4, 2008
2VY6
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BU of 2vy6 by Molmil
Two domains from the C-terminal region of influenza A virus polymerase PB2 subunit
Descriptor: POLYMERASE BASIC PROTEIN 2
Authors:Tarendeau, F, Crepin, T, Guilligay, D, Ruigrok, R, Cusack, S, Hart, D.
Deposit date:2008-07-18
Release date:2008-09-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Host Determinant Residue Lysine 627 Lies on the Surface of a Discrete, Folded Domain of Influenza Virus Polymerase Pb2 Subunit
Plos Pathog., 4, 2008
4NJ5
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BU of 4nj5 by Molmil
Crystal structure of SUVH9
Descriptor: Probable histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9, ZINC ION
Authors:Du, J, Patel, D.J.
Deposit date:2013-11-08
Release date:2014-01-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:SRA- and SET-domain-containing proteins link RNA polymerase V occupancy to DNA methylation.
Nature, 507, 2014
2R7Q
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BU of 2r7q by Molmil
Crystal Structure of VP1 apoenzyme of Rotavirus SA11 (C-terminal hexahistidine-tagged)
Descriptor: RNA-dependent RNA polymerase
Authors:Lu, X, Harrison, S.C, Tao, Y.J, Patton, J.T, Nibert, M.L.
Deposit date:2007-09-09
Release date:2008-07-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Mechanism for coordinated RNA packaging and genome replication by rotavirus polymerase VP1.
Structure, 16, 2008
2R7O
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BU of 2r7o by Molmil
Crystal Structure of VP1 apoenzyme of Rotavirus SA11 (N-terminal hexahistidine-tagged)
Descriptor: RNA-dependent RNA polymerase
Authors:Lu, X, Harrison, S.C, Tao, Y.J, Patton, J.T, Nibert, M.L.
Deposit date:2007-09-09
Release date:2008-07-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Mechanism for coordinated RNA packaging and genome replication by rotavirus polymerase VP1.
Structure, 16, 2008
3GSZ
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BU of 3gsz by Molmil
Structure of the genotype 2B HCV polymerase
Descriptor: RNA-directed RNA polymerase
Authors:Rydberg, E.H, Carfi, A.
Deposit date:2009-03-27
Release date:2009-07-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for resistance of the genotype 2b hepatitis C virus NS5B polymerase to site A non-nucleoside inhibitors.
J.Mol.Biol., 390, 2009
3P9Y
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BU of 3p9y by Molmil
Crystal structure of the Drosophila melanogaster Ssu72-pCTD complex
Descriptor: CG14216, IMIDAZOLE, TETRAETHYLENE GLYCOL, ...
Authors:Werner-Allen, J.W, Zhou, P.
Deposit date:2010-10-18
Release date:2010-12-15
Last modified:2016-08-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:cis-Proline-mediated Ser(P)5 Dephosphorylation by the RNA Polymerase II C-terminal Domain Phosphatase Ssu72.
J.Biol.Chem., 286, 2011
6Q99
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BU of 6q99 by Molmil
Ande virus L protein N-terminus mutant K124A
Descriptor: GLYCEROL, MANGANESE (III) ION, RNA polymerase
Authors:Fernandez-Garcia, Y, Holm, T, Kirchmair, J, Wurr, S, Gunther, S, Reindl, S.
Deposit date:2018-12-17
Release date:2020-01-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.951 Å)
Cite:Specific inhibition of a diverse set of segmented negative strand viruses by a single molecule
To Be Published
4IKA
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BU of 4ika by Molmil
Crystal structure of EV71 3Dpol-VPg
Descriptor: 3Dpol, NICKEL (II) ION, VPg
Authors:Chen, C, Wang, Y.X, Lou, Z.Y.
Deposit date:2012-12-25
Release date:2013-09-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of enterovirus 71 RNA-dependent RNA polymerase complexed with its protein primer VPg: implication for a trans mechanism of VPg uridylylation
J.Virol., 87, 2013

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PDB entries from 2024-08-28

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