PDB: 52540 resultsInfo pagesStatus searchChemie searchBIRD

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3ZI3	Crystal structure of the B24His-insulin - human analogue Descriptor: INSULIN, SULFATE ION Authors: Zakova, L, Kletvikova, E, Veverka, V, Lepsik, M, Watson, C.J, Turkenburg, J.P, Jiracek, J, Brzozowski, A.M. Deposit date: 2013-01-02 Release date: 2013-03-06 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Structural Integrity of the B24 Site in Human Insulin is Important for Hormone Functionality J.Biol.Chem., 288, 2013
1KY6	AP-2 CLATHRIN ADAPTOR ALPHA-APPENDAGE IN COMPLEX WITH EPSIN DPW PEPTIDE Descriptor: ALPHA-ADAPTIN C, EH DOMAIN BINDING PROTEIN EPSIN, SULFATE ION Authors: Brett, T.J, Traub, L.M, Fremont, D.H. Deposit date: 2002-02-03 Release date: 2002-06-12 Last modified: 2023-08-16 Method: X-RAY DIFFRACTION (2 Å) Cite: Accessory protein recruitment motifs in clathrin-mediated endocytosis. Structure, 10, 2002
1YZ5	The crystal structure of 14-3-3-sigma at 2.8 angstrom resolution Descriptor: 14-3-3 protein sigma Authors: Benzinger, A, Popowicz, G.M, Holak, T.A, Hermeking, H. Deposit date: 2005-02-28 Release date: 2005-03-08 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.8 Å) Cite: The crystal structure of the non-liganded 14-3-3sigma protein: insights into determinants of isoform specific ligand binding and dimerization. Cell Res., 15, 2005
3BF6	Thrombin:suramin complex Descriptor: 8,8'-[CARBONYLBIS[IMINO-3,1-PHENYLENECARBONYLIMINO(4-METHYL-3,1-PHENYLENE)CARBONYLIMINO]]BIS-1,3,5-NAPHTHALENETRISULFONIC ACID, PHE-PRO-ARG, Thrombin, ... Authors: Lima, L.M.T.R, Polikarpov, I, Monteiro, R.Q. Deposit date: 2007-11-20 Release date: 2007-12-25 Last modified: 2015-07-15 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structural and thermodynamic analysis of thrombin:suramin interaction in solution and crystal phases. Biochim.Biophys.Acta, 1794, 2009
3B7G	Human DEAD-box RNA helicase DDX20, Conserved domain I (DEAD) in complex with AMPPNP (Adenosine-(Beta,gamma)-imidotriphosphate) Descriptor: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Probable ATP-dependent RNA helicase DDX20 Authors: Karlberg, T, Tresaugues, L, Arrowsmith, C.H, Berglund, H, Busam, R.D, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, I, Kallas, A, Kotenyova, T, Lehtio, L, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Svensson, L, Thorsell, A.G, Van Den Berg, S, Weigelt, J, Welin, M, Holmberg-Schiavone, L, Structural Genomics Consortium (SGC) Deposit date: 2007-10-30 Release date: 2007-11-13 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Comparative Structural Analysis of Human DEAD-Box RNA Helicases. Plos One, 5, 2010
1JLT	Vipoxin Complex Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, PHOSPHOLIPASE A2, ... Authors: Banumathi, S, Rajashankar, K.R, Notzel, C, Aleksiev, B, Singh, T.P, Genov, N, Betzel, C. Deposit date: 2001-07-16 Release date: 2001-10-31 Last modified: 2023-08-16 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Structure of the neurotoxic complex vipoxin at 1.4 A resolution. Acta Crystallogr.,Sect.D, 57, 2001
1ZFT	The crystal structure of an all-RNA minimal Hairpin Ribozyme with mutant G8I at the cleavage site Descriptor: 5'-R(*CP*GP*GP*UP*GP*AP*IP*AP*AP*GP*GP*G)-3', 5'-R(*GP*GP*CP*AP*GP*AP*GP*AP*AP*AP*CP*AP*CP*AP*CP*GP*A)-3', 5'-R(*UP*CP*CP*CP*(A2M)P*GP*UP*CP*CP*AP*CP*CP*G)-3', ... Authors: Wedekind, J.E. Deposit date: 2005-04-20 Release date: 2006-02-14 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.33 Å) Cite: Water in the Active Site of an All-RNA Hairpin Ribozyme and Effects of Gua8 Base Variants on the Geometry of Phosphoryl Transfer. Biochemistry, 45, 2006
1JAU	NMR Solution Structure of the Trp-Rich Peptide of HIV gp41 Bound to DPC Micelles Descriptor: TRANSMEMBRANE GLYCOPROTEIN (GP41) Authors: Schibli, D.J, Montelaro, R.C, Vogel, H.J. Deposit date: 2001-05-31 Release date: 2001-10-17 Last modified: 2022-02-23 Method: SOLUTION NMR Cite: The membrane-proximal tryptophan-rich region of the HIV glycoprotein, gp41, forms a well-defined helix in dodecylphosphocholine micelles. Biochemistry, 40, 2001
4IDW	Polycrystalline T6 Bovine Insulin: Anisotropic Lattice Evolution and Novel Structure Refinement Strategy Descriptor: Insulin A chain, Insulin B chain, ZINC ION Authors: Margiolaki, I, Giannopoulou, A.E, Wright, J.P, Knight, L, Norrman, M, Schluckebier, G, Fitch, A, Von Dreele, R.B. Deposit date: 2012-12-13 Release date: 2013-06-05 Method: POWDER DIFFRACTION Cite: High-resolution powder X-ray data reveal the T6 hexameric form of bovine insulin Acta Crystallogr.,Sect.D, 69, 2013
5WRH	FlgG structure based on the CryoEM map of the bacterial flagellar polyrod Descriptor: Flagellar basal-body rod protein FlgG Authors: Fujii, T, Namba, K. Deposit date: 2016-12-02 Release date: 2017-02-08 Method: ELECTRON MICROSCOPY (7.4 Å) Cite: Identical folds used for distinct mechanical functions of the bacterial flagellar rod and hook. Nat Commun, 8, 2017
5AGA	Crystal structure of the Helicase domain of human DNA polymerase theta in complex with AMPPNP Descriptor: CITRATE ANION, DNA POLYMERASE THETA, MAGNESIUM ION, ... Authors: Newman, J.A, Cooper, C.D.O, Aitkenhead, H, Pinkas, D.M, Kupinska, K, Burgess-Brown, N, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Gileadi, O. Deposit date: 2015-01-29 Release date: 2015-02-25 Last modified: 2015-12-16 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Structure of the Helicase Domain of DNA Polymerase Theta Reveals a Possible Role in the Microhomology-Mediated End-Joining Pathway. Structure, 23, 2015
5AI7	ParM doublet model Descriptor: PLASMID SEGREGATION PROTEIN PARM Authors: Bharat, T.A.M, Murshudov, G.N, Sachse, C, Lowe, J. Deposit date: 2015-02-12 Release date: 2015-04-22 Last modified: 2024-05-08 Method: ELECTRON MICROSCOPY Cite: Structures of Actin-Like Parm Filaments Show Architecture of Plasmid-Segregating Spindles Nature, 523, 2015
3ZEZ	Phage dUTPases control transfer of virulence genes by a proto- oncogenic G protein-like mechanism.(Staphylococcus bacteriophage 80alpha dUTPase with dUPNHPP). Descriptor: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, DUTPASE, MAGNESIUM ION, ... Authors: Tormo-Mas, M.A, Donderis, J, Garcia-Caballer, M, Alt, A, Mir-Sanchis, I, Marina, A, Penades, J.R. Deposit date: 2012-12-10 Release date: 2013-01-30 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Phage Dutpases Control Transfer of Virulence Genes by a Proto-Oncogenic G Protein-Like Mechanism. Mol.Cell, 49, 2013
1XMZ	Crystal structure of the dark state of kindling fluorescent protein kfp from anemonia sulcata Descriptor: BETA-MERCAPTOETHANOL, GFP-like non-fluorescent chromoprotein FP595 chain 1, GFP-like non-fluorescent chromoprotein FP595 chain 2 Authors: Quillin, M.L, Anstrom, D.M, Shu, X, O'Leary, S, Kallio, K, Chudakov, D.M, Remington, S.J. Deposit date: 2004-10-04 Release date: 2005-04-19 Last modified: 2024-07-10 Method: X-RAY DIFFRACTION (1.38 Å) Cite: Kindling Fluorescent Protein from Anemonia sulcata: Dark-State Structure at 1.38 Resolution Biochemistry, 44, 2005
2ZJA	Archaeal DNA helicase Hjm complexed with AMPPCP in form 2 Descriptor: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Putative ski2-type helicase Authors: Oyama, T, Oka, H, Fujikane, R, Ishino, Y, Morikawa, K. Deposit date: 2008-02-29 Release date: 2009-02-10 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Atomic structures and functional implications of the archaeal RecQ-like helicase Hjm Bmc Struct.Biol., 9, 2009
4PJ3	Structural insight into the function and evolution of the spliceosomal helicase Aquarius, Structure of Aquarius in complex with AMPPNP Descriptor: Intron-binding protein aquarius, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER Authors: De, I, Bessonov, S, Hofele, R, dos Santos, K.F, Will, C.L, Urlaub, H, Luhrmann, R, Pena, V. Deposit date: 2014-05-11 Release date: 2015-01-21 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.3 Å) Cite: The RNA helicase Aquarius exhibits structural adaptations mediating its recruitment to spliceosomes. Nat.Struct.Mol.Biol., 22, 2015
5GQO	Structure of the second Single Stranded DNA Binding protein (SSBb) from Mycobacterium smegmatis Descriptor: CALCIUM ION, Single-stranded DNA-binding protein Authors: Singh, A, Varshney, U, Vijayan, M. Deposit date: 2016-08-08 Release date: 2016-10-12 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structure of the second Single Stranded DNA Binding protein (SSBb) from Mycobacterium smegmatis. J. Struct. Biol., 196, 2016
1L6F	Alanine racemase bound with N-(5'-phosphopyridoxyl)-L-alanine Descriptor: ALANYL-PYRIDOXAL-5'-PHOSPHATE, alanine racemase Authors: Watanabe, A, Yoshimura, T, Mikami, B, Hayashi, H, Kagamiyama, H, Esaki, N. Deposit date: 2002-03-09 Release date: 2002-06-05 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2 Å) Cite: Reaction mechanism of alanine racemase from Bacillus stearothermophilus: x-ray crystallographic studies of the enzyme bound with N-(5'-phosphopyridoxyl)alanine. J.Biol.Chem., 277, 2002
3HSG	Crystal structure of E. coli HPPK(Y53A) in complex with MgAMPCPP Descriptor: ACETATE ION, CHLORIDE ION, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, ... Authors: Blaszczyk, J, Li, Y, Yan, H, Ji, X. Deposit date: 2009-06-10 Release date: 2010-06-23 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.14 Å) Cite: Pterin-binding site mutation Y53A, N55A or F123A and activity of E. coli HPPK To be Published
3ZF2	Phage dUTPases control transfer of virulence genes by a proto- oncogenic G protein-like mechanism. (Staphylococcus bacteriophage 80alpha dUTPase). Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DUTPASE, NICKEL (II) ION Authors: Tormo-Mas, M.A, Donderis, J, Garcia-Caballer, M, Alt, A, Mir-Sanchis, I, Marina, A, Penades, J.R. Deposit date: 2012-12-10 Release date: 2013-01-30 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Phage Dutpases Control Transfer of Virulence Genes by a Proto-Oncogenic G Protein-Like Mechanism. Mol.Cell, 49, 2013
5XNA	Crystal structure of a secretary abundant heat soluble (SAHS) protein from Ramazzottius varieornatus (from dimer sample) Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, CHLORIDE ION, ... Authors: Fukuda, Y, Miura, Y, Mizohata, E, Inoue, T. Deposit date: 2017-05-19 Release date: 2017-07-26 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (1.802 Å) Cite: Structural insights into a secretory abundant heat-soluble protein from an anhydrobiotic tardigrade, Ramazzottius varieornatus FEBS Lett., 591, 2017
1L9N	Three-dimensional structure of the human transglutaminase 3 enzyme: binding of calcium ions change structure for activation Descriptor: 2-O-octyl-beta-D-glucopyranose, CALCIUM ION, CHLORIDE ION, ... Authors: Ahvazi, B. Deposit date: 2002-03-26 Release date: 2002-05-29 Last modified: 2023-08-16 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Three-dimensional structure of the human transglutaminase 3 enzyme: binding of calcium ions changes structure for activation. EMBO J., 21, 2002
5SYC	Near-atomic resolution cryo-EM reconstruction of peloruside-stabilized microtubule Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... Authors: Kellogg, E.H, Nogales, E. Deposit date: 2016-08-10 Release date: 2017-02-01 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Insights into the Distinct Mechanisms of Action of Taxane and Non-Taxane Microtubule Stabilizers from Cryo-EM Structures. J. Mol. Biol., 429, 2017
5XVO	E. fae Cas1-Cas2/prespacer/target ternary complex revealing DNA sampling and half-integration states Descriptor: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, DNA (28-MER), ... Authors: Xiao, Y, Ng, S, Nam, K.H, Ke, A. Deposit date: 2017-06-28 Release date: 2017-10-04 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (3.1 Å) Cite: How type II CRISPR-Cas establish immunity through Cas1-Cas2-mediated spacer integration. Nature, 550, 2017
2ZVM	Crystal structure of PCNA in complex with DNA polymerase iota fragment Descriptor: DNA polymerase iota, Proliferating cell nuclear antigen Authors: Hishiki, A, Hashimoto, H, Hanafusa, T, Kamei, K, Ohashi, E, Shimizu, T, Ohmori, H, Sato, M. Deposit date: 2008-11-11 Release date: 2009-02-10 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structural Basis for Novel Interactions between Human Translesion Synthesis Polymerases and Proliferating Cell Nuclear Antigen J.Biol.Chem., 284, 2009

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