Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5IC5
DownloadVisualize
BU of 5ic5 by Molmil
Bacteriophytochrome response regulator RtBRR
Descriptor: CACODYLATE ION, Candidate response regulator, CheY, ...
Authors:Baker, A.W, Satyshur, K.A, Forest, K.T.
Deposit date:2016-02-22
Release date:2016-03-02
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Arm-in-Arm Response Regulator Dimers Promote Intermolecular Signal Transduction.
J.Bacteriol., 198, 2016
6K8E
DownloadVisualize
BU of 6k8e by Molmil
Global regulatory element SarX
Descriptor: HTH-type transcriptional regulator SarX
Authors:Wang, Q.
Deposit date:2019-06-11
Release date:2020-06-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Crystal structure of SarX from Staphylococcus aureus
To Be Published
1GSN
DownloadVisualize
BU of 1gsn by Molmil
HUMAN GLUTATHIONE REDUCTASE MODIFIED BY DINITROSOGLUTATHIONE
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLUTATHIONE, GLUTATHIONE REDUCTASE, ...
Authors:Becker, K, Savvides, S.N, Keese, M, Schirmer, R.H, Karplus, P.A.
Deposit date:1998-02-21
Release date:1998-05-27
Last modified:2011-12-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Enzyme inactivation through sulfhydryl oxidation by physiologic NO-carriers.
Nat.Struct.Biol., 5, 1998
7CKK
DownloadVisualize
BU of 7ckk by Molmil
Structural complex of FTO bound with Dac51
Descriptor: 2-{[2,6-dichloro-4-(3,5-dimethyl-1H-pyrazol-4-yl)phenyl]amino}-N-hydroxybenzamide, Alpha-ketoglutarate-dependent dioxygenase FTO, N-OXALYLGLYCINE
Authors:Yang, C, Gan, J.
Deposit date:2020-07-17
Release date:2021-07-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Tumors exploit FTO-mediated regulation of glycolytic metabolism to evade immune surveillance.
Cell Metab., 33, 2021
7E1B
DownloadVisualize
BU of 7e1b by Molmil
Crystal structure of VbrR-DNA complex
Descriptor: DNA (26-MER), DNA-binding response regulator
Authors:Hong, S, Zhang, X, Zhang, P.
Deposit date:2021-02-01
Release date:2022-02-09
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (4.587 Å)
Cite:Structural basis of phosphorylation-induced activation of the response regulator VbrR.
Acta Biochim.Biophys.Sin., 2023
8YPJ
DownloadVisualize
BU of 8ypj by Molmil
Cyrstal structure of the MazE-mt10 Antitoxin from Mycobacterium tuberculosis
Descriptor: Antitoxin, PHOSPHATE ION
Authors:Lee, K.Y.
Deposit date:2024-03-17
Release date:2024-05-15
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:DNA binding reveals hidden interdomain allostery of a MazE antitoxin from Mycobacterium tuberculosis.
Biochem.Biophys.Res.Commun., 710, 2024
2FEJ
DownloadVisualize
BU of 2fej by Molmil
Solution structure of human p53 DNA binding domain.
Descriptor: Cellular tumor antigen p53, ZINC ION
Authors:Perez-Canadillas, J.M, Tidow, H, Freund, S.M, Rutherford, T.J, Ang, H.C, Fersht, A.R.
Deposit date:2005-12-16
Release date:2006-01-31
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of p53 core domain: Structural basis for its instability
Proc.Natl.Acad.Sci.Usa, 103, 2006
2GNV
DownloadVisualize
BU of 2gnv by Molmil
Crystal structure of non-symbiotic plant hemoglobin from rice, B10 mutant F40L
Descriptor: 1,4-DIETHYLENE DIOXIDE, Non-symbiotic hemoglobin 1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Hoy, J.A.
Deposit date:2006-04-11
Release date:2006-04-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Role of Phenylalanine B10 in Plant Nonsymbiotic Hemoglobins
Biochemistry, 45, 2006
5BRJ
DownloadVisualize
BU of 5brj by Molmil
Structure of the bacteriophytochrome response regulator AtBRR
Descriptor: MAGNESIUM ION, Two component response regulator
Authors:Baker, A.W, Satyshur, K.A, Forest, K.T.
Deposit date:2015-05-31
Release date:2016-02-24
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.922 Å)
Cite:Arm-in-Arm Response Regulator Dimers Promote Intermolecular Signal Transduction.
J.Bacteriol., 198, 2016
8I74
DownloadVisualize
BU of 8i74 by Molmil
Crystal structure of decarboxylated osteocalcin at pH 8.5
Descriptor: Osteocalcin
Authors:Yokoyama, T, Nabeshima, Y, Obita, T, Mizuguchi, M.
Deposit date:2023-01-31
Release date:2024-01-31
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Structural and mutational analyses of decarboxylated osteocalcin provide insight into its adiponectin-inducing activity.
Febs Lett., 597, 2023
8I75
DownloadVisualize
BU of 8i75 by Molmil
Crystal structure of decarboxylated osteocalcin at pH 2.0
Descriptor: Osteocalcin
Authors:Yokoyama, T, Nabeshima, Y, Obita, T, Mizuguchi, M.
Deposit date:2023-01-31
Release date:2024-01-31
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Structural and mutational analyses of decarboxylated osteocalcin provide insight into its adiponectin-inducing activity.
Febs Lett., 597, 2023
8I76
DownloadVisualize
BU of 8i76 by Molmil
Crystal structure of decarboxylated osteocalcin at pH 2.0 without glycerol
Descriptor: Osteocalcin
Authors:Yokoyama, T, Nabeshima, Y, Obita, T, Mizuguchi, M.
Deposit date:2023-01-31
Release date:2024-01-31
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (1.381 Å)
Cite:Structural and mutational analyses of decarboxylated osteocalcin provide insight into its adiponectin-inducing activity.
Febs Lett., 597, 2023
5DYM
DownloadVisualize
BU of 5dym by Molmil
Crystal structure of a PadR family transcription regulator from hypervirulent Clostridium difficile R20291 - CdPadR_0991 to 1.89 Angstrom resolution
Descriptor: PadR-family transcriptional regulator
Authors:Isom, C.E, Karr, E.A, Menon, S.K, West, A.H, Richter-Addo, G.B.
Deposit date:2015-09-24
Release date:2016-10-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.894 Å)
Cite:Crystal structure and DNA binding activity of a PadR family transcription regulator from hypervirulent Clostridium difficile R20291.
Bmc Microbiol., 16, 2016
5TN2
DownloadVisualize
BU of 5tn2 by Molmil
Solution Structure of the C-terminal multimerization domain of the master biofilm-regulator SinR from Bacillus subtilis
Descriptor: HTH-type transcriptional regulator SinR
Authors:Draughn, G.L, Bobay, B.G, Stowe, S.D, Thompson, R.J, Cavanagh, J.
Deposit date:2016-10-13
Release date:2017-10-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The Solution Structures and Interaction of SinR and SinI: Elucidating the Mechanism of Action of the Master Regulator Switch for Biofilm Formation in Bacillus subtilis.
J.Mol.Biol., 2019
7SRV
DownloadVisualize
BU of 7srv by Molmil
Metal dependent activation of Plasmodium falciparum M17 aminopeptidase (inactive form), spacegroup P22121
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
Authors:Webb, C.T, McGowan, S.
Deposit date:2021-11-08
Release date:2022-06-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:A metal ion-dependent conformational switch modulates activity of the Plasmodium M17 aminopeptidase.
J.Biol.Chem., 298, 2022
3EPS
DownloadVisualize
BU of 3eps by Molmil
The crystal structure of isocitrate dehydrogenase kinase/phosphatase from E. coli
Descriptor: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Isocitrate dehydrogenase kinase/phosphatase, ...
Authors:Zheng, J, Jia, Z, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2008-09-29
Release date:2010-04-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the bifunctional isocitrate dehydrogenase kinase/phosphatase.
Nature, 465, 2010
5VAR
DownloadVisualize
BU of 5var by Molmil
Crystal structure of KDM4A tandem TUDOR domain in complex with a tri-methyl lysine competitive inhibitor
Descriptor: (1R,2S,3R,4S)-3-[(dimethylamino)methyl]-1-phenylbicyclo[2.2.1]heptan-2-ol, Lysine-specific demethylase 4A
Authors:Judge, R.A, Upadhyay, A.K.
Deposit date:2017-03-27
Release date:2018-03-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Targeting lysine specific demethylase 4A (KDM4A) tandem TUDOR domain - A fragment based approach.
Bioorg. Med. Chem. Lett., 28, 2018
3DTU
DownloadVisualize
BU of 3dtu by Molmil
Catalytic core subunits (I and II) of cytochrome c oxidase from Rhodobacter sphaeroides complexed with deoxycholic acid
Descriptor: (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID, CADMIUM ION, CALCIUM ION, ...
Authors:Qin, L, Mills, D.A, Buhrow, L, Hiser, C, Ferguson-Miller, S.
Deposit date:2008-07-15
Release date:2008-09-16
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:A conserved steroid binding site in cytochrome C oxidase.
Biochemistry, 47, 2008
7CFK
DownloadVisualize
BU of 7cfk by Molmil
Structure of the CBS domain of the bacterial CNNM/CorC family Mg2+ transporter in complex with the novel inhibitor IGN95a
Descriptor: (2S)-2-[(6-azanyl-9H-purin-8-yl)sulfanyl]butanoic acid, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Hemolysin
Authors:Huang, Y, Jin, F, Hattori, M.
Deposit date:2020-06-25
Release date:2021-04-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Identification and mechanistic analysis of an inhibitor of the CorC Mg 2+ transporter.
Iscience, 24, 2021
2RD8
DownloadVisualize
BU of 2rd8 by Molmil
Human Thymidylate Synthase Stabilized in Active Conformation by R163K Mutation: Asymmetry and Reactivity of Cys195
Descriptor: BETA-MERCAPTOETHANOL, PHOSPHATE ION, Thymidylate synthase
Authors:Gibson, L.M, Lovelace, L.L, Lebioda, L.
Deposit date:2007-09-21
Release date:2008-05-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The R163K Mutant of Human Thymidylate Synthase Is Stabilized in an Active Conformation: Structural Asymmetry and Reactivity of Cysteine 195.
Biochemistry, 47, 2008
7T3V
DownloadVisualize
BU of 7t3v by Molmil
Metal dependent activation of Plasmodium falciparum M17 aminopeptidase, spacegroup P22121 after crystals soaked with Zn2+
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CARBONATE ION, M17 leucyl aminopeptidase, ...
Authors:Webb, C.T, McGowan, S.
Deposit date:2021-12-08
Release date:2022-06-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A metal ion-dependent conformational switch modulates activity of the Plasmodium M17 aminopeptidase.
J.Biol.Chem., 298, 2022
3IAU
DownloadVisualize
BU of 3iau by Molmil
The structure of the processed form of threonine deaminase isoform 2 from Solanum lycopersicum
Descriptor: ACETATE ION, POLYETHYLENE GLYCOL (N=34), SULFATE ION, ...
Authors:Bianchetti, C.M, Bingman, C.A, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2009-07-14
Release date:2009-07-28
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.353 Å)
Cite:Adaptive evolution of threonine deaminase in plant defense against insect herbivores.
Proc.Natl.Acad.Sci.USA, 108, 2011
2CJ5
DownloadVisualize
BU of 2cj5 by Molmil
Crystal Structure of a Cell Wall Invertase Inhibitor from Tobacco (pH 5.0)
Descriptor: ACETATE ION, INVERTASE INHIBITOR, SULFATE ION
Authors:Hothorn, M, Scheffzek, K.
Deposit date:2006-03-29
Release date:2006-03-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Multiple Crystal Forms of the Cell-Wall Invertase Inhibitor from Tobacco Support High Conformational Rigidity Over a Broad Ph-Range
Acta Crystallogr.,Sect.D, 62, 2006
2CJ8
DownloadVisualize
BU of 2cj8 by Molmil
Crystal Structure of a Cell Wall Invertase Inhibitor from Tobacco (pH 9.5)
Descriptor: INVERTASE INHIBITOR, IODIDE ION
Authors:Hothorn, M, Scheffzek, K.
Deposit date:2006-03-29
Release date:2006-04-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Multiple Crystal Forms of the Cell-Wall Invertase Inhibitor from Tobacco Support High Conformational Rigidity Over a Broad Ph-Range
Acta Crystallogr.,Sect.D, 62, 2006
2CJ4
DownloadVisualize
BU of 2cj4 by Molmil
Crystal Structure of a Cell Wall Invertase Inhibitor from Tobacco at pH 4.6
Descriptor: ACETATE ION, INVERTASE INHIBITOR, SULFATE ION
Authors:Hothorn, M, Scheffzek, K.
Deposit date:2006-03-29
Release date:2006-03-30
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Multiple Crystal Forms of the Cell Wall Invertase Inhibitor from Tobacco Support High Conformational Rigidity Over a Broad Ph-Range
Acta Crystallogr.,Sect.D, 62, 2006

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon